Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 2.0e-101 372.5 197 100.0
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 5.7e-43 178.3 156 60.3
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 5.7e-43 178.3 164 56.7
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 4.8e-42 175.3 171 57.9
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.8e-42 175.3 199 50.8
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 1.1e-41 174.1 199 53.3
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 1.1e-41 174.1 202 49.5
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 6.9e-41 171.4 182 56.0
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 9.0e-41 171.0 150 64.0
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 1.2e-40 170.6 182 53.3
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 2.0e-40 169.9 194 53.6
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 2.6e-40 169.5 174 55.2
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 4.5e-40 168.7 182 53.8
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.0e-39 167.5 181 53.0
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 1.0e-39 167.5 182 52.2
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 1.0e-39 167.5 174 54.0
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 1.0e-39 167.5 201 51.2
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 1.0e-39 167.5 178 52.8
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 1.3e-39 167.2 181 52.5
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 1.3e-39 167.2 182 52.2
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 1.3e-39 167.2 182 52.2
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.7e-39 166.8 177 54.2
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 1.7e-39 166.8 181 53.0
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 2.2e-39 166.4 187 50.8
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 2.2e-39 166.4 172 53.5
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 2.9e-39 166.0 171 56.1
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 2.9e-39 166.0 158 57.6
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 3.8e-39 165.6 181 51.4
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 6.5e-39 164.9 190 50.5
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 6.5e-39 164.9 203 46.8
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 6.5e-39 164.9 181 53.6
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 1.1e-38 164.1 215 49.3
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 1.1e-38 164.1 156 58.3
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 1.9e-38 163.3 181 51.4
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 1.9e-38 163.3 181 51.4
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 1.9e-38 163.3 181 51.4
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 2.5e-38 162.9 215 48.8
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 4.2e-38 162.2 199 51.3
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 9.3e-38 161.0 202 49.0
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.2e-37 160.6 182 52.2
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.2e-37 160.6 199 50.3
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.2e-37 160.6 162 56.2
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 2.1e-37 159.8 180 52.2
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 2.1e-37 159.8 136 63.2
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 2.7e-37 159.5 169 56.2
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 3.5e-37 159.1 200 51.0
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 4.6e-37 158.7 202 47.5
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 6.1e-37 158.3 204 45.6
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 7.9e-37 157.9 184 52.7
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 7.9e-37 157.9 184 52.7
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 7.9e-37 157.9 184 51.1
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.0e-36 157.5 174 54.0
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 1.3e-36 157.1 172 51.7
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.3e-36 157.1 184 51.1
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.8e-36 156.8 200 51.0
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 1.8e-36 156.8 190 50.5
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 2.3e-36 156.4 170 54.1
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 2.3e-36 156.4 203 47.8
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.3e-36 156.4 161 57.8
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 3.0e-36 156.0 162 56.2
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 3.0e-36 156.0 197 50.3
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 3.9e-36 155.6 146 59.6
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 3.9e-36 155.6 175 51.4
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 6.7e-36 154.8 177 52.0
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 6.7e-36 154.8 197 50.8
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 8.7e-36 154.5 150 56.7
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 8.7e-36 154.5 160 56.2
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 8.7e-36 154.5 204 47.1
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 8.7e-36 154.5 209 48.8
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 8.7e-36 154.5 172 53.5
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 8.7e-36 154.5 146 58.9
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.1e-35 154.1 172 51.7
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 1.1e-35 154.1 201 49.8
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.1e-35 154.1 199 49.7
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.1e-35 154.1 188 49.5
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 1.1e-35 154.1 197 50.8
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 1.5e-35 153.7 190 48.9
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.9e-35 153.3 189 48.7
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 1.9e-35 153.3 191 52.4
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 2.5e-35 152.9 192 48.4
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 3.3e-35 152.5 204 46.6
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 3.3e-35 152.5 201 48.8
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 3.3e-35 152.5 173 50.9
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 3.3e-35 152.5 206 46.6
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.3e-35 152.1 204 46.6
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 7.4e-35 151.4 177 49.2
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 9.7e-35 151.0 167 52.7
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 9.7e-35 151.0 162 53.7
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 1.6e-34 150.2 134 61.2
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 1.6e-34 150.2 194 49.0
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.2e-34 149.8 170 52.4
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 2.2e-34 149.8 161 54.7
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 4.8e-34 148.7 137 59.1
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 4.8e-34 148.7 141 58.2
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 6.3e-34 148.3 209 43.5
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 6.3e-34 148.3 202 46.0
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 6.3e-34 148.3 206 45.1
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 6.3e-34 148.3 194 48.5
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 3.1e-33 146.0 205 46.3
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 4.1e-33 145.6 141 57.4
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 4.1e-33 145.6 206 45.1
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 4.5e-32 142.1 192 46.4
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 4.5e-32 142.1 177 49.2
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 5.9e-32 141.7 149 53.0
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 4.2e-30 135.6 198 44.9
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 2.1e-29 133.3 125 58.4
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 2.1e-29 133.3 207 42.5
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 2.7e-29 132.9 141 51.8
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.0e-28 131.0 174 48.9
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.0e-28 131.0 139 54.0
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.0e-28 131.0 115 63.5
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.4e-28 130.6 203 45.3
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 2.3e-28 129.8 198 46.0
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 1.1e-27 127.5 139 51.8
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.5e-27 127.1 118 58.5
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.4e-25 119.8 165 47.9
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.7e-23 113.6 112 57.1
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 5.5e-22 108.6 169 44.4
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 1.0e-20 104.4 203 39.9
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 3.9e-20 102.4 126 50.8
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 5.3e-17 92.0 82 56.1
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 3.8e-15 85.9 184 34.2
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 5.0e-15 85.5 97 52.6
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 7.4e-11 71.6 159 34.0
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.6e-08 63.2 144 36.1
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 9.4e-06 54.7 111 36.9


User provided reference genes

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