Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0057 Selaginella moellendorffii HOM05D000149 ORTHO05D000076 9.0e-181 636.7 304 100.0
SMO141G0162 Selaginella moellendorffii HOM05D000027 ORTHO05D000671 2.2e-22 110.5 54 96.3
SMO367G0836 Selaginella moellendorffii HOM05D000149 ORTHO05D000076 4.4e-18 96.3 112 50.9
SMO170G0057 Selaginella moellendorffii HOM05D000027 ORTHO05D000671 3.1e-16 90.1 61 75.4
SMO196G0069 Selaginella moellendorffii HOM05D000027 ORTHO05D000066 4.7e-12 76.3 55 65.5
SMO143G0038 Selaginella moellendorffii HOM05D000027 ORTHO05D000066 1.4e-11 74.7 41 78.0
SMO196G0230 Selaginella moellendorffii HOM05D000027 ORTHO05D000671 2.3e-11 73.9 55 63.6
CARHR269700 Cardamine hirsuta HOM05D000149 ORTHO05D000076 5.7e-10 69.3 102 40.2
Manes.15G111600 Manihot esculenta HOM05D000149 ORTHO05D000076 2.8e-09 67.0 103 40.8
Prupe.4G223900 Prunus persica HOM05D000149 ORTHO05D000076 2.8e-09 67.0 173 32.4
THA.LOC104811708 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 2.8e-09 67.0 99 40.4
Pp3c5_3220 Physcomitrium patens HOM05D000149 ORTHO05D000076 3.7e-09 66.6 183 32.8
SEGI_04746 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 3.7e-09 66.6 118 34.7
SEGI_31092 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 3.7e-09 66.6 118 34.7
CSS0036542 Camellia sinensis var. sinensis HOM05D000149 ORTHO05D000076 4.8e-09 66.2 195 32.8
TWI60G1465 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 4.8e-09 66.2 110 37.3
AL8G31930 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 6.3e-09 65.9 103 39.8
Eucgr.J01721 Eucalyptus grandis HOM05D000149 ORTHO05D000076 8.2e-09 65.5 143 36.4
Eucgr.F00649 Eucalyptus grandis HOM05D000149 ORTHO05D000076 1.1e-08 65.1 166 31.9
MD11G1209300 Malus domestica HOM05D000149 ORTHO05D000076 1.1e-08 65.1 168 31.0
Eucgr.H03344 Eucalyptus grandis HOM05D000149 ORTHO05D000076 1.8e-08 64.3 162 29.6
Potri.017G122000 Populus trichocarpa HOM05D000149 ORTHO05D000076 1.8e-08 64.3 187 27.8
MBI19_g24064_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 2.4e-08 63.9 130 36.9
Nn2g15919 Nelumbo nucifera HOM05D000149 ORTHO05D000076 2.4e-08 63.9 100 42.0
SMO367G1170 Selaginella moellendorffii HOM05D000149 ORTHO05D000076 2.4e-08 63.9 106 45.3
TWI32G0997 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 2.4e-08 63.9 108 40.7
FAN11G3695 Fragaria x ananassa HOM05D000149 ORTHO05D000076 3.1e-08 63.5 206 28.2
GSVIVG01025514001 Vitis vinifera HOM05D000149 ORTHO05D000076 3.1e-08 63.5 102 39.2
Atru.chr3.2038 Acer truncatum HOM05D000149 ORTHO05D000076 4.1e-08 63.2 111 37.8
Carub.0008s1662 Capsella rubella HOM05D000149 ORTHO05D000076 4.1e-08 63.2 106 40.6
FAN25G2091 Fragaria x ananassa HOM05D000149 ORTHO05D000076 4.1e-08 63.2 188 30.3
Potri.017G121800 Populus trichocarpa HOM05D000149 ORTHO05D000076 5.3e-08 62.8 179 27.4
CDE02G1647 Ceratophyllum demersum HOM05D000149 ORTHO05D000076 7.0e-08 62.4 100 39.0
CDE04G1373 Ceratophyllum demersum HOM05D001256 ORTHO05D000076 7.0e-08 62.4 100 39.0
COL.COLO4_35059 Corchorus olitorius HOM05D000149 ORTHO05D000076 7.0e-08 62.4 104 37.5
FAN16G0629 Fragaria x ananassa HOM05D000149 ORTHO05D000076 7.0e-08 62.4 188 30.3
FAN21G0558 Fragaria x ananassa HOM05D000149 ORTHO05D000076 7.0e-08 62.4 188 30.3
Mapoly0092s0080 Marchantia polymorpha HOM05D000149 ORTHO05D000076 7.0e-08 62.4 201 26.9
Pp3c3_19530 Physcomitrium patens HOM05D000149 ORTHO05D000076 7.0e-08 62.4 105 42.9
SEGI_03521 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 7.0e-08 62.4 159 32.1
SEGI_30849 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 7.0e-08 62.4 116 37.1
TWI38G0730 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 7.0e-08 62.4 171 31.6
PGR119G2156 Punica granatum HOM05D000149 ORTHO05D000076 9.1e-08 62.0 110 38.2
PSO339G2212 Papaver somniferum HOM05D000149 ORTHO05D000076 1.2e-07 61.6 101 40.6
Prupe.4G223700 Prunus persica HOM05D000149 ORTHO05D000076 1.2e-07 61.6 167 31.1
RcHm_v2.0_Chr5g0041561 Rosa chinensis HOM05D000149 ORTHO05D000076 1.2e-07 61.6 179 30.2
SMO367G0611 Selaginella moellendorffii HOM05D000149 ORTHO05D000076 1.2e-07 61.6 104 45.2
Cfa009522 Carpinus fangiana HOM05D000149 ORTHO05D000076 1.6e-07 61.2 103 38.8
FvH4_3g23570 Fragaria vesca HOM05D000149 ORTHO05D000076 1.6e-07 61.2 166 30.7
PSO384G0767 Papaver somniferum HOM05D000149 ORTHO05D000076 1.6e-07 61.2 101 40.6
SEGI_20011 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 1.6e-07 61.2 144 33.3
Medtr3g054330 Medicago truncatula HOM05D000149 ORTHO05D000076 2.0e-07 60.8 167 31.7
Prupe.4G214300 Prunus persica HOM05D000149 ORTHO05D000076 2.0e-07 60.8 171 31.0
SEGI_32111 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 2.0e-07 60.8 140 33.6
Dinv06282 Davidia involucrata HOM05D000149 ORTHO05D000076 2.7e-07 60.5 188 30.9
Eucgr.H03342 Eucalyptus grandis HOM05D000149 ORTHO05D000076 2.7e-07 60.5 162 28.4
Manes.03G136100 Manihot esculenta HOM05D000149 ORTHO05D000076 2.7e-07 60.5 178 29.8
Mapoly0038s0025 Marchantia polymorpha HOM05D000149 ORTHO05D000076 2.7e-07 60.5 194 27.8
Medtr3g052700 Medicago truncatula HOM05D000149 ORTHO05D000076 2.7e-07 60.5 199 28.6
Prupe.2G265900 Prunus persica HOM05D000149 ORTHO05D000076 2.7e-07 60.5 168 32.7
QL01p007741 Quercus lobata HOM05D000149 ORTHO05D000076 2.7e-07 60.5 106 37.7
Sed0010838 Sechium edule HOM05D000149 ORTHO05D000076 2.7e-07 60.5 202 30.2
SMO343G0114 Selaginella moellendorffii HOM05D000149 ORTHO05D000076 2.7e-07 60.5 104 41.3
Hund01953 Selenicereus undatus HOM05D000149 ORTHO05D000076 2.7e-07 60.5 185 30.3
Haze_22911 Corylus avellana HOM05D000149 ORTHO05D000076 3.5e-07 60.1 103 37.9
MD03G1193100 Malus domestica HOM05D000149 ORTHO05D000076 3.5e-07 60.1 168 29.8
Pp3c16_20180 Physcomitrium patens HOM05D000149 ORTHO05D000076 3.5e-07 60.1 164 32.3
SEGI_37081 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 3.5e-07 60.1 103 37.9
TPR.G32237 Trifolium pratense HOM05D000149 ORTHO05D000076 3.5e-07 60.1 167 31.1
VMungo0647G1670 Vigna mungo HOM05D000149 ORTHO05D000076 3.5e-07 60.1 168 30.4
DCAR_030190 Daucus carota HOM05D000149 ORTHO05D000076 4.5e-07 59.7 104 39.4
Dinv06610 Davidia involucrata HOM05D000149 ORTHO05D000076 4.5e-07 59.7 189 29.6
Phvul.006G048600 Phaseolus vulgaris HOM05D000149 ORTHO05D000076 4.5e-07 59.7 179 31.8
PGR083G2094 Punica granatum HOM05D000149 ORTHO05D000076 4.5e-07 59.7 192 30.7
QL03p037026 Quercus lobata HOM05D000149 ORTHO05D000076 4.5e-07 59.7 172 30.2
SMO164G0180 Selaginella moellendorffii HOM05D000149 ORTHO05D000076 4.5e-07 59.7 101 36.6
arahy.Tifrunner.gnm1.ann1.8B5KZC Arachis hypogaea HOM05D000149 ORTHO05D000076 5.9e-07 59.3 166 31.3
Glyma.02G295300 Glycine max HOM05D000149 ORTHO05D000076 5.9e-07 59.3 168 31.5
HanXRQChr11g0334281 Helianthus annuus HOM05D000149 ORTHO05D000076 5.9e-07 59.3 187 30.5
Phvul.008G272800 Phaseolus vulgaris HOM05D000149 ORTHO05D000076 5.9e-07 59.3 170 29.4
TPR.G35366 Trifolium pratense HOM05D000149 ORTHO05D000076 5.9e-07 59.3 169 32.0
EL10Ac4g07686 Beta vulgaris HOM05D000149 ORTHO05D000076 7.7e-07 58.9 182 28.6
BcaNung05646 Brassica carinata HOM05D000149 ORTHO05D000076 7.7e-07 58.9 103 39.8
AUR62020338 Chenopodium quinoa HOM05D000149 ORTHO05D000076 7.7e-07 58.9 167 29.9
HanXRQChr11g0325521 Helianthus annuus HOM05D000149 ORTHO05D000076 7.7e-07 58.9 164 29.9
Lalb_Chr15g0081771 Lupinus albus HOM05D000149 ORTHO05D000076 7.7e-07 58.9 174 30.5
MD15G1116500 Malus domestica HOM05D000149 ORTHO05D000076 7.7e-07 58.9 178 31.5
Nn1g03333 Nelumbo nucifera HOM05D000149 ORTHO05D000076 7.7e-07 58.9 167 32.9
Nitab4.5_0000640g0080 Nicotiana tabacum HOM05D000149 ORTHO05D000076 7.7e-07 58.9 165 30.3
AT5G56300 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 1.0e-06 58.5 103 36.9
Dinv18913 Davidia involucrata HOM05D000149 ORTHO05D000076 1.0e-06 58.5 173 30.6
Thhalv10013757m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 1.0e-06 58.5 108 40.7
TWI75G1524 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 1.0e-06 58.5 186 30.6
arahy.Tifrunner.gnm1.ann1.VKL24F Arachis hypogaea HOM05D000149 ORTHO05D000076 1.3e-06 58.2 166 31.3
BcaB01g05894 Brassica carinata HOM05D000149 ORTHO05D000076 1.3e-06 58.2 161 30.4
C03p02000 Brassica napus HOM05D000149 ORTHO05D000076 1.3e-06 58.2 161 30.4
BolC3t12754H Brassica oleracea HOM05D000149 ORTHO05D000076 1.3e-06 58.2 161 30.4
Cpa.g.sc12.234 Carica papaya HOM05D000149 ORTHO05D000076 1.3e-06 58.2 173 28.3
Ciclev10017993m.g Citrus clementina HOM05D000149 ORTHO05D000076 1.3e-06 58.2 110 34.5
Lalb_Chr18g0050331 Lupinus albus HOM05D000149 ORTHO05D000076 1.3e-06 58.2 164 31.7
Nitab4.5_0000198g0060 Nicotiana tabacum HOM05D000149 ORTHO05D000076 1.3e-06 58.2 166 30.7
Os06g0323100 Oryza sativa ssp. japonica HOM05D000149 ORTHO05D000076 1.3e-06 58.2 127 37.0
HPP92_007513 Vanilla planifolia HOM05D000149 ORTHO05D000076 1.3e-06 58.2 103 41.7
Atru.chr2.3535 Acer truncatum HOM05D000149 ORTHO05D000076 1.7e-06 57.8 176 28.4
Haze_10859 Corylus avellana HOM05D000149 ORTHO05D000076 1.7e-06 57.8 172 32.0
ECA236G3131 Erigeron canadensis HOM05D000149 ORTHO05D000076 1.7e-06 57.8 102 39.2
Lsat_1_v5_gn_3_26140 Lactuca sativa HOM05D000149 ORTHO05D000076 1.7e-06 57.8 174 32.8
Manes.15G066100 Manihot esculenta HOM05D000149 ORTHO05D000076 1.7e-06 57.8 168 29.8
SalBow8G5547 Salvia bowleyana HOM05D000149 ORTHO05D000076 1.7e-06 57.8 106 36.8
Sed0004280 Sechium edule HOM05D000149 ORTHO05D000076 1.7e-06 57.8 96 32.3
TWI15G0024 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 1.7e-06 57.8 170 32.9
ATR0068G012 Amborella trichopoda HOM05D000149 ORTHO05D000076 2.2e-06 57.4 110 39.1
AagrBONN_evm.TU.Sc2ySwM_344.5548 Anthoceros agrestis HOM05D000149 ORTHO05D000076 2.2e-06 57.4 106 38.7
EL10Ac2g03790 Beta vulgaris HOM05D000149 ORTHO05D000076 2.2e-06 57.4 189 28.0
CSS0006792 Camellia sinensis var. sinensis HOM05D000149 ORTHO05D000076 2.2e-06 57.4 105 37.1
AUR62015885 Chenopodium quinoa HOM05D000149 ORTHO05D000076 2.2e-06 57.4 170 29.4
LjContig00272g0014861 Lotus japonicus HOM05D000149 ORTHO05D000076 2.2e-06 57.4 170 31.2
QL03p036644 Quercus lobata HOM05D000149 ORTHO05D000076 2.2e-06 57.4 173 30.6
QL03p037375 Quercus lobata HOM05D000149 ORTHO05D000076 2.2e-06 57.4 173 30.6
SalBow3G2362 Salvia bowleyana HOM05D000149 ORTHO05D000076 2.2e-06 57.4 98 39.8
SalBow3G2886 Salvia bowleyana HOM05D000149 ORTHO05D000076 2.2e-06 57.4 98 39.8
Sc03g0008300 Simmondsia chinensis HOM05D000149 ORTHO05D000076 2.2e-06 57.4 182 30.2
TWI39G0217 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 2.2e-06 57.4 168 32.7
Ah.06g182210 Amaranthus hybridus HOM05D000149 ORTHO05D000076 2.9e-06 57.0 182 28.6
Cfa015041 Carpinus fangiana HOM05D000149 ORTHO05D000076 2.9e-06 57.0 182 28.6
Eucgr.H03343 Eucalyptus grandis HOM05D000149 ORTHO05D000076 2.9e-06 57.0 160 28.1
Psat2g009960 Pisum sativum HOM05D000149 ORTHO05D000076 2.9e-06 57.0 171 31.0
Rhsim04G0170500 Rhododendron simsii HOM05D000149 ORTHO05D000076 2.9e-06 57.0 164 30.5
SEGI_02660 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 2.9e-06 57.0 107 36.4
SEGI_26856 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 2.9e-06 57.0 164 28.0
GSVIVG01037730001 Vitis vinifera HOM05D000149 ORTHO05D000076 2.9e-06 57.0 168 33.9
Ciclev10008599m.g Citrus clementina HOM05D000149 ORTHO05D000076 3.8e-06 56.6 105 40.0
Lj6g0027019 Lotus japonicus HOM05D000149 ORTHO05D000076 3.8e-06 56.6 168 31.5
PSO541G2646 Papaver somniferum HOM05D000149 ORTHO05D000076 3.8e-06 56.6 105 41.9
PSO675G1072 Papaver somniferum HOM05D000149 ORTHO05D000076 3.8e-06 56.6 105 41.9
Potri.005G045900 Populus trichocarpa HOM05D000149 ORTHO05D000076 3.8e-06 56.6 101 37.6
QL04p049335 Quercus lobata HOM05D000149 ORTHO05D000076 3.8e-06 56.6 160 29.4
QL08p007603 Quercus lobata HOM05D000149 ORTHO05D000076 3.8e-06 56.6 101 39.6
Sed0001941 Sechium edule HOM05D000149 ORTHO05D000076 3.8e-06 56.6 172 30.8
AagrBONN_evm.TU.Sc2ySwM_362.2030 Anthoceros agrestis HOM05D000149 ORTHO05D000076 5.0e-06 56.2 106 40.6
Haze_09749 Corylus avellana HOM05D000149 ORTHO05D000076 5.0e-06 56.2 168 29.8
Dinv18915 Davidia involucrata HOM05D000149 ORTHO05D000076 5.0e-06 56.2 171 26.9
Eucgr.H03340 Eucalyptus grandis HOM05D000149 ORTHO05D000076 5.0e-06 56.2 162 27.2
Glyma.18G089800 Glycine max HOM05D000149 ORTHO05D000076 5.0e-06 56.2 169 32.0
Manes.04G074231 Manihot esculenta HOM05D000149 ORTHO05D000076 5.0e-06 56.2 165 30.3
Mapoly0010s0035 Marchantia polymorpha HOM05D000149 ORTHO05D000076 5.0e-06 56.2 106 36.8
Oeu050219.1 Olea europaea HOM05D000027 ORTHO05D000671 5.0e-06 56.2 50 50.0
Psat0s1327g0040 Pisum sativum HOM05D000149 ORTHO05D000076 5.0e-06 56.2 101 37.6
SMO329G0063 Selaginella moellendorffii HOM05D000027 ORTHO05D020993 5.0e-06 56.2 35 65.7
THA.LOC104811634 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 5.0e-06 56.2 110 36.4
AagrBONN_evm.TU.Sc2ySwM_344.5554 Anthoceros agrestis HOM05D000149 ORTHO05D000076 6.5e-06 55.8 110 38.2
AagrBONN_evm.TU.Sc2ySwM_362.1551 Anthoceros agrestis HOM05D000149 ORTHO05D000076 6.5e-06 55.8 106 39.6
AT1G68040 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 6.5e-06 55.8 103 34.0
Thhalv10013754m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 6.5e-06 55.8 112 34.8
MBI16_g42265_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 6.5e-06 55.8 166 28.9
Nitab4.5_0001160g0030 Nicotiana tabacum HOM05D000149 ORTHO05D000076 6.5e-06 55.8 101 39.6
Nitab4.5_0005221g0030 Nicotiana tabacum HOM05D000149 ORTHO05D000076 6.5e-06 55.8 101 39.6
RcHm_v2.0_Chr7g0179041 Rosa chinensis HOM05D000149 ORTHO05D000076 6.5e-06 55.8 104 37.5
SalBow5G3269 Salvia bowleyana HOM05D000149 ORTHO05D000076 6.5e-06 55.8 105 38.1
SMO115G0018 Selaginella moellendorffii HOM05D000027 ORTHO05D000671 6.5e-06 55.8 39 56.4
SMO196G0195 Selaginella moellendorffii HOM05D000027 ORTHO05D020993 6.5e-06 55.8 50 52.0
SEGI_11376 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 6.5e-06 55.8 129 33.3
SEGI_19530 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 6.5e-06 55.8 129 33.3
SEGI_37468 Sequoiadendron giganteum HOM05D000149 ORTHO05D000076 6.5e-06 55.8 110 35.5
vmacro08573 Vaccinium macrocarpon HOM05D000149 ORTHO05D000076 6.5e-06 55.8 156 32.7
Aa31LG3G11240 Aethionema arabicum HOM05D000149 ORTHO05D000076 8.5e-06 55.5 111 37.8
BcaNung02420 Brassica carinata HOM05D000149 ORTHO05D000076 8.5e-06 55.5 104 35.6
BcaNung02421 Brassica carinata HOM05D000149 ORTHO05D000076 8.5e-06 55.5 104 35.6
Cfa020274 Carpinus fangiana HOM05D000149 ORTHO05D000076 8.5e-06 55.5 168 30.4
Cc05_g14330 Coffea canephora HOM05D000149 ORTHO05D000076 8.5e-06 55.5 111 38.7
Duzib170G0775 Durio zibethinus HOM05D000149 ORTHO05D000076 8.5e-06 55.5 170 28.8
Duzib213G0825 Durio zibethinus HOM05D000149 ORTHO05D000076 8.5e-06 55.5 170 28.8
Gohir.A01G084900 Gossypium hirsutum HOM05D000149 ORTHO05D000076 8.5e-06 55.5 170 28.8
Gohir.D01G071300 Gossypium hirsutum HOM05D000149 ORTHO05D000076 8.5e-06 55.5 170 28.8
Gorai.002G094100 Gossypium raimondii HOM05D000149 ORTHO05D000076 8.5e-06 55.5 170 28.8
Gorai.011G275600 Gossypium raimondii HOM05D000027 ORTHO05D000066 8.5e-06 55.5 42 59.5
Sp7g24330 Schrenkiella parvula HOM05D000149 ORTHO05D000076 8.5e-06 55.5 103 37.9
TAR371G0466 Trochodendron aralioides HOM05D000149 ORTHO05D000076 8.5e-06 55.5 176 28.4


User provided reference genes

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