Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.4e-292 1008.8 506 100.0
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 7.3e-111 405.2 563 40.5
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.2e-108 397.9 553 43.2
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.5e-108 397.5 537 41.0
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.6e-108 396.7 536 41.6
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 4.4e-108 396.0 543 41.3
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.7e-107 394.0 533 42.0
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 2.2e-107 393.7 555 41.6
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.9e-107 393.3 494 42.3
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 3.7e-107 392.9 544 40.8
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.9e-106 390.6 535 41.7
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 3.2e-106 389.8 521 42.6
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.1e-106 389.4 536 41.2
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 7.1e-106 388.7 551 39.7
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 9.2e-106 388.3 519 41.8
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 3.5e-105 386.3 523 41.1
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 4.6e-105 386.0 542 40.0
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 6.0e-105 385.6 556 39.9
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 1.7e-104 384.0 546 39.6
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.3e-104 383.6 574 39.7
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 3.9e-104 382.9 541 39.9
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 5.1e-104 382.5 503 41.9
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 6.6e-104 382.1 504 41.9
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 6.6e-104 382.1 567 39.7
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.1e-103 381.3 498 41.6
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 1.5e-103 380.9 511 42.3
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 2.5e-103 380.2 545 39.6
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 3.3e-103 379.8 530 41.1
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 3.3e-103 379.8 545 39.8
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 5.6e-103 379.0 509 42.8
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 5.6e-103 379.0 544 41.0
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 5.6e-103 379.0 573 40.1
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 7.3e-103 378.6 590 37.6
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 7.3e-103 378.6 550 39.8
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.6e-102 377.5 510 41.8
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 2.8e-102 376.7 560 39.8
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 3.6e-102 376.3 552 39.3
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 6.2e-102 375.6 556 38.8
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 1.4e-101 374.4 511 41.3
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 2.4e-101 373.6 535 41.5
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 4.0e-101 372.9 530 40.9
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 4.0e-101 372.9 561 38.9
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 4.0e-101 372.9 542 40.0
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 4.0e-101 372.9 527 41.7
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 5.2e-101 372.5 511 40.7
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 6.8e-101 372.1 563 39.4
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 1.2e-100 371.3 539 41.4
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.0e-100 370.5 593 37.8
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 2.6e-100 370.2 518 40.2
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 3.4e-100 369.8 561 39.6
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 3.4e-100 369.8 525 41.0
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 5.8e-100 369.0 555 39.1
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 9.9e-100 368.2 522 41.4
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 9.9e-100 368.2 531 40.9
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 1.3e-99 367.9 548 40.1
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 2.9e-99 366.7 503 41.2
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 3.8e-99 366.3 550 39.5
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.1e-98 364.8 570 38.1
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 1.9e-98 364.0 529 39.5
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 2.4e-98 363.6 562 38.8
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 2.4e-98 363.6 514 39.9
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 2.1e-97 360.5 603 38.0
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.6e-94 350.9 589 36.7
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 2.1e-94 350.5 409 47.2
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 2.8e-94 350.1 616 36.2
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 6.2e-94 349.0 589 36.3
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 2.4e-93 347.1 535 39.3
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 6.9e-93 345.5 623 35.5
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 5.8e-92 342.4 493 40.8
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.6e-86 323.2 383 47.0
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.8e-86 322.8 480 39.4
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.2e-84 318.2 537 36.3
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.5e-84 317.8 508 38.6
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 4.9e-83 312.8 485 37.7
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 3.0e-80 303.5 537 37.1
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 3.7e-78 296.6 386 42.2
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 3.1e-77 293.5 531 36.7
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 4.5e-76 289.7 504 35.7
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 9.0e-69 265.4 364 41.8
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 4.5e-68 263.1 377 40.6
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.8e-62 243.8 421 35.6
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.8e-61 241.1 293 43.3
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 9.0e-61 238.8 303 43.2
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 1.2e-60 238.4 332 41.3
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 1.3e-59 235.0 365 40.5
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 7.9e-49 199.1 272 43.4
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 2.8e-46 190.7 408 31.4
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 2.2e-43 181.0 258 40.7
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 4.2e-42 176.8 278 37.8
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 1.4e-40 171.8 248 37.9
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 6.3e-38 162.9 243 41.6
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 6.5e-35 152.9 186 42.5
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 1.9e-34 151.4 276 35.5
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 4.4e-31 140.2 219 38.8
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 3.7e-30 137.1 187 43.3
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 4.5e-28 130.2 68 97.1
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 4.7e-25 120.2 195 36.4
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 6.8e-24 116.3 169 38.5
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.7e-22 110.5 191 35.6
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.7e-22 110.5 191 35.6
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.1e-18 99.0 183 39.3
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 8.0e-17 92.8 97 43.3
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 1.3e-14 85.5 111 37.8
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.6e-12 78.6 112 35.7
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 1.3e-11 75.5 135 40.7
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 1.1e-10 72.4 84 40.5
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 3.6e-09 67.4 295 23.7


User provided reference genes

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