Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.1e-195 684.9 326 100.0
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.6e-159 566.2 326 86.5
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 3.5e-58 229.6 246 48.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.8e-57 227.3 225 48.0
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 8.7e-57 224.9 224 50.0
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.4e-54 216.9 223 46.6
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 9.0e-54 214.9 224 46.0
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 2.0e-53 213.8 226 46.0
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 4.5e-53 212.6 233 45.9
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 2.2e-52 210.3 222 45.9
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 2.2e-52 210.3 234 44.4
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.9e-52 209.9 233 45.1
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 6.5e-52 208.8 222 46.4
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 8.4e-52 208.4 226 44.2
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.5e-51 206.8 224 45.1
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 2.5e-51 206.8 284 38.0
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 5.5e-51 205.7 234 44.9
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 9.3e-51 204.9 233 42.9
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 3.5e-50 203.0 226 45.1
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.0e-49 201.4 224 43.8
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.3e-49 201.1 217 45.6
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.8e-49 200.7 225 44.9
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.8e-49 200.7 223 44.4
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 2.3e-49 200.3 223 44.4
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 2.3e-49 200.3 232 43.5
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 5.1e-49 199.1 224 42.9
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 6.7e-49 198.7 241 43.6
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 2.5e-48 196.8 235 43.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.5e-48 196.8 229 42.8
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.3e-48 196.4 227 43.2
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 4.3e-48 196.1 229 41.5
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 5.7e-48 195.7 222 43.7
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.2e-47 193.7 237 42.2
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 2.8e-47 193.4 241 40.7
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 2.8e-47 193.4 227 42.7
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.4e-46 190.3 241 40.7
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 5.3e-46 189.1 222 44.1
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.1e-43 181.4 216 43.1
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 3.2e-43 179.9 276 36.6
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 7.2e-43 178.7 186 46.8
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.2e-42 177.9 222 39.6
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.6e-42 177.6 172 48.3
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.7e-42 176.8 233 42.9
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.0e-41 174.9 226 39.8
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 3.9e-41 172.9 221 41.6
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.9e-40 170.6 234 40.6
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 8.2e-39 165.2 214 40.7
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 8.2e-39 165.2 223 39.9
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 1.8e-38 164.1 220 37.7
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 4.5e-37 159.5 256 36.7
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 5.9e-37 159.1 174 43.7
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.3e-36 157.9 214 38.3
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.5e-35 153.7 216 38.0
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 2.5e-35 153.7 230 37.0
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 5.7e-32 142.5 137 48.2
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 9.7e-32 141.7 128 50.0
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.8e-31 140.2 211 36.0
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 1.8e-30 137.5 128 51.6
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 4.1e-30 136.3 126 46.8
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.3e-28 131.3 218 36.2
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.0e-28 129.4 149 42.3
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.9e-27 127.5 114 52.6
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 2.5e-27 127.1 226 33.2
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 4.2e-27 126.3 131 45.0
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 9.4e-27 125.2 158 40.5
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.6e-26 124.4 212 31.6
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 3.6e-26 123.2 111 50.5
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 3.9e-25 119.8 112 49.1
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 6.7e-25 119.0 137 44.5
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.7e-24 115.9 115 50.4
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 9.7e-24 115.2 114 46.5
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.4e-22 111.3 129 42.6
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.4e-22 111.3 110 46.4
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 4.1e-22 109.8 100 51.0
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 3.5e-21 106.7 143 40.6
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.9e-20 103.6 104 47.1
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 3.8e-20 103.2 104 46.2
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 5.0e-20 102.8 89 53.9
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 2.7e-18 97.1 118 39.8
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 2.2e-15 87.4 113 38.9
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 2.8e-15 87.0 78 46.2
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 1.2e-13 81.6 224 29.0
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 8.5e-12 75.5 204 27.9
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 2.0e-08 64.3 94 35.1


User provided reference genes

Program Settings