Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO142G0015 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 4.4e-172 607.8 299 100.0
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 2.7e-145 518.8 284 91.9
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 7.7e-84 314.7 326 49.7
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 2.5e-82 309.7 312 52.6
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 3.9e-80 302.4 307 51.5
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 8.8e-80 301.2 316 50.9
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 1.1e-79 300.8 311 50.2
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 1.5e-79 300.4 317 49.5
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 8.2e-78 294.7 306 50.3
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 3.1e-77 292.7 309 48.9
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 4.1e-77 292.4 309 49.8
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 9.1e-77 291.2 311 49.2
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 1.5e-76 290.4 313 47.9
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 2.0e-76 290.0 309 49.5
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 4.5e-76 288.9 314 49.7
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 5.9e-76 288.5 311 49.2
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.0e-75 287.7 311 47.6
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 5.0e-75 285.4 313 47.6
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 5.0e-75 285.4 309 47.9
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 6.5e-75 285.0 308 48.1
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 6.5e-75 285.0 311 47.9
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 8.5e-75 284.6 312 47.1
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 1.4e-74 283.9 311 47.6
CSS0043122 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 1.9e-74 283.5 311 47.6
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 1.9e-74 283.5 311 47.9
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 1.9e-74 283.5 314 49.4
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 2.5e-74 283.1 312 49.4
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 2.5e-74 283.1 311 47.9
Ca_09379_v3 Cicer arietinum L. HOM05D002930 ORTHO05D003283 3.2e-74 282.7 311 47.6
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 3.2e-74 282.7 312 49.4
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 9.4e-74 281.2 311 46.6
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 1.2e-73 280.8 313 47.9
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 1.2e-73 280.8 311 46.6
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 1.2e-73 280.8 312 48.1
Lalb_Chr04g0260861 Lupinus albus HOM05D002930 ORTHO05D003283 1.6e-73 280.4 311 46.9
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 1.6e-73 280.4 311 47.3
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 1.6e-73 280.4 311 47.9
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 2.1e-73 280.0 311 47.6
Manes.05G071700 Manihot esculenta HOM05D002930 ORTHO05D003283 2.1e-73 280.0 314 48.1
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 2.7e-73 279.6 315 47.9
Phvul.006G095000 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 2.7e-73 279.6 311 47.3
HPP92_025233 Vanilla planifolia HOM05D002930 ORTHO05D003283 4.7e-73 278.9 308 47.4
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 6.1e-73 278.5 311 46.9
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 8.0e-73 278.1 311 47.6
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 8.0e-73 278.1 314 48.4
CDE08G1581 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 1.0e-72 277.7 311 47.9
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.0e-72 277.7 314 48.4
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 1.4e-72 277.3 314 46.8
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 1.4e-72 277.3 318 48.4
Gohir.D13G110000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-72 277.3 311 46.6
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.4e-72 277.3 311 46.6
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 1.4e-72 277.3 315 46.7
DCAR_012456 Daucus carota HOM05D002930 ORTHO05D003283 1.8e-72 276.9 310 48.1
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 1.8e-72 276.9 311 46.9
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 1.8e-72 276.9 315 47.6
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 1.8e-72 276.9 313 47.0
COL.COLO4_13526 Corchorus olitorius HOM05D002930 ORTHO05D003283 2.3e-72 276.6 311 47.3
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 2.3e-72 276.6 315 47.0
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 3.0e-72 276.2 311 47.3
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 3.0e-72 276.2 314 48.4
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 3.0e-72 276.2 311 46.9
VMungo0540G0500 Vigna mungo HOM05D002930 ORTHO05D003283 3.0e-72 276.2 311 46.6
MBI19_g21645_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 3.9e-72 275.8 309 46.9
Gohir.A08G184940 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.2e-72 275.4 317 48.3
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 6.7e-72 275.0 317 47.9
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 8.8e-72 274.6 311 46.6
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.1e-71 274.2 314 46.5
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.1e-71 274.2 305 47.9
Actinidia21089 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.5e-71 273.9 311 45.0
Gohir.D08G203100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.5e-71 273.9 317 47.6
Lj9C680G12 Lonicera japonica HOM05D002930 ORTHO05D003283 1.5e-71 273.9 375 42.7
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 2.6e-71 273.1 311 45.7
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 2.6e-71 273.1 316 46.2
VMungo0720G1472 Vigna mungo HOM05D002930 ORTHO05D003283 2.6e-71 273.1 315 46.3
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 3.3e-71 272.7 312 45.8
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 3.3e-71 272.7 314 46.2
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.3e-71 272.7 311 46.3
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 3.3e-71 272.7 311 46.9
arahy.Tifrunner.gnm1.ann1.M1RB0X Arachis hypogaea HOM05D002930 ORTHO05D003283 5.7e-71 271.9 315 46.7
arahy.Tifrunner.gnm1.ann1.K2UAY4 Arachis hypogaea HOM05D002930 ORTHO05D003283 7.4e-71 271.6 315 46.7
Hma1.2p1_2318F.1_g319800 Hydrangea macrophylla HOM05D002930 ORTHO05D003283 7.4e-71 271.6 311 46.9
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 9.7e-71 271.2 318 45.3
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 9.7e-71 271.2 310 45.2
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 9.7e-71 271.2 314 45.5
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 1.7e-70 270.4 311 46.9
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 2.2e-70 270.0 314 47.8
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 2.8e-70 269.6 316 47.2
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 2.8e-70 269.6 315 46.0
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 4.8e-70 268.9 312 45.5
DCAR_022250 Daucus carota HOM05D002930 ORTHO05D003283 8.2e-70 268.1 311 46.0
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 1.1e-69 267.7 312 47.1
Psat6g169840 Pisum sativum HOM05D002930 ORTHO05D003283 1.1e-69 267.7 316 45.9
SEGI_00362 Sequoiadendron giganteum HOM05D002930 ORTHO05D003283 1.1e-69 267.7 294 45.9
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 2.4e-69 266.5 317 45.7
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 3.1e-69 266.2 317 45.1
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 3.1e-69 266.2 318 44.0
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 4.1e-69 265.8 317 45.4
A04p35160 Brassica napus HOM05D002930 ORTHO05D003283 7.0e-69 265.0 315 45.1
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 7.0e-69 265.0 315 45.1
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 9.1e-69 264.6 313 45.4
Rhsim01G0277900 Rhododendron simsii HOM05D002930 ORTHO05D003283 9.1e-69 264.6 315 46.0
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 9.1e-69 264.6 314 46.2
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 1.2e-68 264.2 314 46.5
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 1.2e-68 264.2 314 44.6
Hund05360 Selenicereus undatus HOM05D002930 ORTHO05D003283 1.2e-68 264.2 315 46.3
arahy.Tifrunner.gnm1.ann1.HQA39L Arachis hypogaea HOM05D002930 ORTHO05D003283 1.6e-68 263.8 323 43.0
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 2.0e-68 263.5 323 43.0
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 2.0e-68 263.5 312 45.2
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 2.0e-68 263.5 315 44.8
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 2.6e-68 263.1 314 43.9
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 2.6e-68 263.1 314 45.5
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 3.5e-68 262.7 314 44.9
PGSC0003DMG400003809 Solanum tuberosum HOM05D002930 ORTHO05D003283 3.5e-68 262.7 311 45.3
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 4.5e-68 262.3 314 46.2
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 5.9e-68 261.9 314 44.9
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 5.9e-68 261.9 313 45.7
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 5.9e-68 261.9 311 45.0
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 7.7e-68 261.5 315 44.8
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 1.0e-67 261.2 314 44.6
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 1.3e-67 260.8 315 44.4
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 1.3e-67 260.8 315 44.4
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 1.7e-67 260.4 315 44.4
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 1.7e-67 260.4 315 44.4
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 1.7e-67 260.4 315 44.4
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.9e-67 259.6 318 46.2
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 3.8e-67 259.2 315 44.1
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.8e-67 259.2 318 46.2
Sed0024970 Sechium edule HOM05D002930 ORTHO05D003283 3.8e-67 259.2 317 44.5
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 6.5e-67 258.5 315 44.1
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 6.5e-67 258.5 311 44.7
Ciclev10018445m.g Citrus clementina HOM05D002930 ORTHO05D003283 8.5e-67 258.1 313 45.4
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.1e-66 257.7 320 44.4
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.5e-66 257.3 305 46.9
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 3.2e-66 256.1 315 44.1
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 4.2e-66 255.8 346 42.5
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 5.5e-66 255.4 294 46.6
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 2.1e-65 253.4 315 43.8
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 4.7e-65 252.3 317 44.2
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 6.1e-65 251.9 314 43.0
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 2.0e-60 236.9 285 44.2
Os01g0388500 Oryza sativa ssp. japonica HOM05D002930 ORTHO05D003283 2.0e-60 236.9 264 47.7
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.7e-59 233.8 293 45.1
HPP92_017201 Vanilla planifolia HOM05D002930 ORTHO05D003283 2.5e-58 229.9 307 41.7
Aqoxy211s006 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 8.3e-54 214.9 209 54.1
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.6e-49 200.7 234 49.6
Cpa.g.sc9.131 Carica papaya HOM05D002930 ORTHO05D003283 1.4e-48 197.6 273 40.3
CBR_g45306 Chara braunii HOM05D002930 ORTHO05D000002 1.4e-48 197.6 298 38.6
CiPaw.07G096200 Carya illinoinensis HOM05D002930 ORTHO05D003283 3.7e-46 189.5 170 57.6
TAR375G0113 Trochodendron aralioides HOM05D002930 ORTHO05D003283 3.4e-39 166.4 180 53.3
Lj1A43G57 Lonicera japonica HOM05D002930 ORTHO05D003283 1.2e-36 157.9 138 60.1
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 4.6e-36 156.0 226 38.9
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 3.5e-28 129.8 171 40.9
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 1.0e-27 128.3 196 38.8
Prupe.2G260500 Prunus persica HOM05D002930 ORTHO05D003283 1.7e-27 127.5 98 67.3
MBI19_g46385_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 3.0e-27 126.7 74 79.7
SHI15436 Sapria himalayana HOM05D002930 ORTHO05D003283 1.9e-26 124.0 171 36.8
Cre09.g402108 Chlamydomonas reinhardtii HOM05D002930 ORTHO05D003283 6.4e-14 82.4 70 54.3


User provided reference genes

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