Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0276 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 0.0e+00 1610.1 813 100.0
SMO271G0006 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 1.0e-45 189.5 427 30.2
SMO118G0067 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 7.5e-33 146.7 433 28.9
SMO328G0023 Selaginella moellendorffii HOM05D026688 ORTHO05D013300 2.3e-29 135.2 243 37.0
SMO341G0002 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 2.3e-29 135.2 547 26.7
SMO364G0674 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 1.5e-25 122.5 501 25.1
Cre17.g697800 Chlamydomonas reinhardtii HOM05D031464 ORTHO05D013300 1.6e-22 112.5 418 26.6
Cre17.g744697 Chlamydomonas reinhardtii HOM05D031464 ORTHO05D013300 1.9e-20 105.5 148 37.8
SMO147G0135 Selaginella moellendorffii HOM05D026688 ORTHO05D013300 4.3e-20 104.4 320 27.5
Cre04.g231418 Chlamydomonas reinhardtii HOM05D031464 ORTHO05D013300 5.6e-20 104.0 159 33.3
SMO119G0443 Selaginella moellendorffii HOM05D015218 ORTHO05D013300 5.2e-18 97.4 188 33.5
SMO145G0005 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 1.6e-14 85.9 128 36.7
SMO236G0113 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 3.5e-14 84.7 128 35.9
SMO300G0004 Selaginella moellendorffii HOM05D016451 ORTHO05D013300 3.5e-14 84.7 128 35.9
Cre01.g028650 Chlamydomonas reinhardtii HOM05D031324 ORTHO05D013300 6.6e-13 80.5 236 24.2
Cre10.g422400 Chlamydomonas reinhardtii HOM05D031324 ORTHO05D013300 3.3e-12 78.2 233 23.2
Cre06.g298050 Chlamydomonas reinhardtii HOM05D031324 ORTHO05D013300 5.6e-12 77.4 237 23.2
SMO169G0232 Selaginella moellendorffii HOM05D015218 ORTHO05D013300 2.1e-11 75.5 168 29.8
SMO146G0028 Selaginella moellendorffii HOM05D015218 ORTHO05D374337 3.1e-10 71.6 148 29.7
Thecc.10G087300 Theobroma cacao HOM05D002307 ORTHO05D002378 5.2e-10 70.9 221 27.6
Cc02_g10710 Coffea canephora HOM05D002307 ORTHO05D002378 6.8e-10 70.5 218 30.7
Pp3c20_11340 Physcomitrium patens HOM05D016785 ORTHO05D019602 1.2e-09 69.7 64 57.8
Pp3c20_12670 Physcomitrium patens HOM05D016785 ORTHO05D019602 1.2e-09 69.7 64 57.8
Gohir.D10G208601 Gossypium hirsutum HOM05D002307 ORTHO05D002378 2.0e-09 68.9 196 30.6
Gorai.011G234500 Gossypium raimondii HOM05D002307 ORTHO05D002378 2.6e-09 68.6 198 29.8
HanXRQChr11g0345931 Helianthus annuus HOM05D002307 ORTHO05D002378 3.4e-09 68.2 192 30.7
Sed0007477 Sechium edule HOM05D002307 ORTHO05D002378 3.4e-09 68.2 212 30.2
Sed0014202 Sechium edule HOM05D002307 ORTHO05D002378 3.4e-09 68.2 195 29.7
Gohir.A10G200900 Gossypium hirsutum HOM05D002307 ORTHO05D002378 4.4e-09 67.8 198 29.8
HanXRQChr07g0197821 Helianthus annuus HOM05D002307 ORTHO05D002378 9.9e-09 66.6 205 31.2
COL.COLO4_09862 Corchorus olitorius HOM05D002307 ORTHO05D002378 2.9e-08 65.1 189 30.2
Carub.0004s0894 Capsella rubella HOM05D002307 ORTHO05D002378 8.4e-08 63.5 201 30.3
SMO334G0112 Selaginella moellendorffii HOM05D015218 ORTHO05D375088 8.4e-08 63.5 147 29.3
Duzib114G0495 Durio zibethinus HOM05D002307 ORTHO05D002378 1.1e-07 63.2 210 27.6
Gohir.D03G130000 Gossypium hirsutum HOM05D002619 ORTHO05D002804 1.1e-07 63.2 213 30.5
Rhsim03G0112500 Rhododendron simsii HOM05D002307 ORTHO05D002378 1.4e-07 62.8 192 30.7
Sed0024909 Sechium edule HOM05D002619 ORTHO05D002804 1.4e-07 62.8 221 30.8
THA.LOC104814869 Tarenaya hassleriana HOM05D002619 ORTHO05D002804 1.4e-07 62.8 207 31.4
VMungo1383G3532 Vigna mungo HOM05D002619 ORTHO05D002804 1.9e-07 62.4 207 29.0
RhsimUnG0033000 Rhododendron simsii HOM05D002307 ORTHO05D002378 2.4e-07 62.0 192 30.7
Actinidia03694 Actinidia chinensis HOM05D002307 ORTHO05D002378 5.4e-07 60.8 192 30.7
Gorai.003G136700 Gossypium raimondii HOM05D002619 ORTHO05D002804 5.4e-07 60.8 213 30.0
CANSAT54G2555 Cannabis sativa HOM05D002619 ORTHO05D002804 7.1e-07 60.5 211 30.3
HanXRQChr11g0346571 Helianthus annuus HOM05D002307 ORTHO05D002378 7.1e-07 60.5 178 30.3
TWI31G0042 Tripterygium wilfordii HOM05D002619 ORTHO05D002804 7.1e-07 60.5 229 27.9
AT2G28140 Arabidopsis thaliana HOM05D002307 ORTHO05D002378 9.3e-07 60.1 200 28.5
PGR102G0064 Punica granatum HOM05D002619 ORTHO05D002804 1.2e-06 59.7 220 26.8
Gohir.A13G229100 Gossypium hirsutum HOM05D002619 ORTHO05D002804 1.6e-06 59.3 197 29.9
Zm00001eb355620 Zea mays HOM05D002619 ORTHO05D002804 1.6e-06 59.3 215 28.4
Sed0027582 Sechium edule HOM05D002307 ORTHO05D002378 2.1e-06 58.9 211 27.0
Actinidia20429 Actinidia chinensis HOM05D002307 ORTHO05D002378 2.7e-06 58.5 205 26.3
CARHR120990 Cardamine hirsuta HOM05D002307 ORTHO05D002378 2.7e-06 58.5 191 29.3
Zm00001eb266340 Zea mays HOM05D002619 ORTHO05D002804 2.7e-06 58.5 230 31.3
GSVIVG01025607001 Vitis vinifera HOM05D000001 ORTHO05D009784 3.5e-06 58.2 228 28.9
CSS0018989 Camellia sinensis var. sinensis HOM05D002307 ORTHO05D002378 4.6e-06 57.8 193 29.5
THA.LOC104826385 Tarenaya hassleriana HOM05D002307 ORTHO05D002378 4.6e-06 57.8 200 29.0
MSTRG.12631 Avicennia marina HOM05D002619 ORTHO05D002804 6.0e-06 57.4 198 27.3
Eucgr.B02404 Eucalyptus grandis HOM05D002619 ORTHO05D002804 6.0e-06 57.4 235 30.2
Potri.009G027100 Populus trichocarpa HOM05D002619 ORTHO05D002804 6.0e-06 57.4 272 26.8
Prupe.6G248900 Prunus persica HOM05D000001 ORTHO05D009784 6.0e-06 57.4 225 27.1


User provided reference genes

Program Settings