Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 2.8e-106 388.7 197 100.0
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 3.0e-76 288.9 182 76.9
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 2.5e-75 285.8 182 75.3
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 2.5e-75 285.8 182 75.3
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 3.3e-75 285.4 182 75.3
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 3.3e-75 285.4 182 76.4
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 5.6e-75 284.6 183 77.0
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 7.3e-75 284.3 182 74.7
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 9.6e-75 283.9 182 74.7
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 1.2e-74 283.5 182 74.2
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 1.2e-74 283.5 182 73.1
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 1.2e-74 283.5 182 73.1
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 1.2e-74 283.5 182 73.1
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 1.2e-74 283.5 182 74.7
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.2e-74 283.5 182 74.7
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 1.2e-74 283.5 197 70.6
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 1.2e-74 283.5 182 74.7
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 1.6e-74 283.1 182 73.6
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 1.6e-74 283.1 182 75.8
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 1.6e-74 283.1 182 73.6
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 2.1e-74 282.7 182 74.2
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 2.1e-74 282.7 182 73.1
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 2.1e-74 282.7 182 73.6
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 2.1e-74 282.7 182 74.2
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 2.1e-74 282.7 182 73.1
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 74.2
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 73.1
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 75.8
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 75.3
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 75.3
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 73.6
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 74.7
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 2.8e-74 282.3 182 74.2
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 3.6e-74 282.0 182 72.5
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 3.6e-74 282.0 182 74.7
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 4.7e-74 281.6 182 74.2
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 4.7e-74 281.6 182 73.6
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 4.7e-74 281.6 182 73.6
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 4.7e-74 281.6 182 73.6
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 4.7e-74 281.6 182 73.1
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 6.2e-74 281.2 182 73.6
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 6.2e-74 281.2 183 72.7
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 8.1e-74 280.8 182 73.1
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 8.1e-74 280.8 182 73.6
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 8.1e-74 280.8 182 74.7
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 8.1e-74 280.8 182 74.2
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 8.1e-74 280.8 183 72.7
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 8.1e-74 280.8 182 74.7
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 8.1e-74 280.8 182 73.6
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 1.1e-73 280.4 182 73.1
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 1.1e-73 280.4 182 72.5
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.1e-73 280.4 182 73.6
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 1.4e-73 280.0 196 69.4
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 1.4e-73 280.0 182 73.1
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 1.4e-73 280.0 182 73.6
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 1.8e-73 279.6 182 72.0
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 2.4e-73 279.3 182 74.2
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 2.4e-73 279.3 182 73.1
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 2.4e-73 279.3 182 74.2
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 3.1e-73 278.9 182 72.5
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 3.1e-73 278.9 182 72.5
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 3.1e-73 278.9 182 74.7
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 4.0e-73 278.5 182 72.0
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 4.0e-73 278.5 182 73.6
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 4.0e-73 278.5 182 72.0
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 4.0e-73 278.5 182 74.2
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 5.2e-73 278.1 182 73.6
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 5.2e-73 278.1 197 70.6
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 8.9e-73 277.3 182 75.3
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 8.9e-73 277.3 182 72.0
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 8.9e-73 277.3 182 72.5
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.2e-72 276.9 182 72.0
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 1.2e-72 276.9 182 72.5
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 1.2e-72 276.9 182 73.1
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 1.5e-72 276.6 182 72.0
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.5e-72 276.6 182 73.6
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.5e-72 276.6 182 73.6
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 2.6e-72 275.8 182 73.6
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 3.4e-72 275.4 183 76.0
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 4.4e-72 275.0 182 72.0
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 5.8e-72 274.6 182 72.5
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 7.6e-72 274.2 194 70.6
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 9.9e-72 273.9 182 73.1
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 9.9e-72 273.9 182 71.4
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 9.9e-72 273.9 182 69.2
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 1.7e-71 273.1 182 71.4
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 2.9e-71 272.3 182 71.4
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 6.4e-71 271.2 181 71.8
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 1.1e-70 270.4 182 70.9
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 1.1e-70 270.4 182 71.4
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 2.4e-70 269.2 182 70.3
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 1.6e-69 266.5 182 69.8
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 2.7e-69 265.8 182 70.3
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 1.7e-68 263.1 197 65.5
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 1.3e-66 256.9 199 64.8
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 4.6e-61 238.4 158 72.2
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 4.8e-58 228.4 182 64.3
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 5.3e-57 224.9 160 68.1
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 1.1e-49 200.7 198 56.1
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 5.3e-49 198.4 184 55.4
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 6.7e-44 181.4 181 54.7
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.7e-42 175.6 119 70.6
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 6.2e-42 174.9 112 73.2
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 6.9e-41 171.4 111 73.0
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 1.3e-34 150.6 98 73.5
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 5.9e-32 141.7 99 65.7
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 7.9e-29 131.3 106 61.3
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 1.0e-23 114.4 75 72.0
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 1.3e-23 114.0 75 72.0
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 2.9e-23 112.8 113 49.6
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 9.4e-14 81.3 187 33.2
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 2.7e-13 79.7 186 32.3
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 6.3e-10 68.6 55 63.6
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 1.6e-08 63.9 37 81.1
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 1.1e-06 57.8 35 71.4


User provided reference genes

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