Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 4.0e-78 294.7 146 100.0
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.0e-28 130.6 129 53.5
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.3e-28 130.2 119 55.5
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 1.7e-28 129.8 134 52.2
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 3.8e-28 128.6 120 56.7
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 6.5e-28 127.9 128 55.5
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.1e-27 127.1 118 56.8
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.1e-27 127.1 125 56.8
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.4e-27 126.7 119 58.0
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.4e-27 126.7 125 53.6
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.9e-27 126.3 125 53.6
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 2.5e-27 125.9 120 59.2
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.5e-27 125.9 118 57.6
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 4.2e-27 125.2 120 54.2
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 4.2e-27 125.2 131 54.2
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.2e-27 125.2 119 56.3
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 5.5e-27 124.8 128 53.1
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 7.2e-27 124.4 121 55.4
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 7.2e-27 124.4 122 55.7
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.2e-26 123.6 121 52.9
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.2e-26 123.6 126 56.3
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.2e-26 123.6 121 54.5
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 1.6e-26 123.2 123 52.8
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.6e-26 123.2 122 55.7
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.6e-26 123.2 119 52.9
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.6e-26 123.2 119 55.5
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 2.1e-26 122.9 166 44.0
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 2.1e-26 122.9 120 53.3
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.1e-26 122.9 133 51.1
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 2.1e-26 122.9 124 54.8
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 3.6e-26 122.1 121 52.1
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 3.6e-26 122.1 117 55.6
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 3.6e-26 122.1 117 55.6
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 4.7e-26 121.7 125 50.4
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 4.7e-26 121.7 122 54.9
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 4.7e-26 121.7 117 52.1
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 6.1e-26 121.3 119 56.3
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 6.1e-26 121.3 119 52.9
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 6.1e-26 121.3 119 53.8
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 7.9e-26 120.9 117 52.1
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 7.9e-26 120.9 122 54.9
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 7.9e-26 120.9 122 54.9
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.9e-26 120.9 116 53.4
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 7.9e-26 120.9 122 50.0
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 7.9e-26 120.9 118 55.1
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.0e-25 120.6 116 53.4
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.0e-25 120.6 116 53.4
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.0e-25 120.6 123 54.5
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.0e-25 120.6 120 54.2
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.0e-25 120.6 123 49.6
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.0e-25 120.6 120 55.0
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.4e-25 120.2 125 48.8
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.8e-25 119.8 120 51.7
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-25 119.8 116 53.4
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.8e-25 119.8 118 50.0
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 2.3e-25 119.4 135 49.6
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.3e-25 119.4 123 51.2
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 3.9e-25 118.6 119 52.9
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 3.9e-25 118.6 138 44.9
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 5.1e-25 118.2 119 54.6
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 6.7e-25 117.9 120 51.7
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 6.7e-25 117.9 119 52.1
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 6.7e-25 117.9 127 48.8
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 6.7e-25 117.9 120 50.8
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 8.8e-25 117.5 120 51.7
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 8.8e-25 117.5 121 51.2
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 8.8e-25 117.5 121 51.2
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 8.8e-25 117.5 121 51.2
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 8.8e-25 117.5 121 51.2
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 8.8e-25 117.5 134 47.0
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 8.8e-25 117.5 127 51.2
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-24 117.1 116 52.6
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.1e-24 117.1 121 48.8
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.5e-24 116.7 121 50.4
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.5e-24 116.7 117 51.3
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.5e-24 116.7 119 51.3
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.0e-24 116.3 122 50.8
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 2.6e-24 115.9 127 47.2
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 2.6e-24 115.9 151 46.4
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 3.3e-24 115.5 117 51.3
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 3.3e-24 115.5 117 53.0
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 3.3e-24 115.5 119 50.4
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 4.4e-24 115.2 121 49.6
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 4.4e-24 115.2 143 45.5
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 4.4e-24 115.2 123 51.2
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 7.4e-24 114.4 121 52.1
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 7.4e-24 114.4 117 52.1
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 9.7e-24 114.0 118 52.5
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 9.7e-24 114.0 117 52.1
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 9.7e-24 114.0 130 47.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.3e-23 113.6 123 51.2
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.7e-23 113.2 119 48.7
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.2e-23 112.8 117 50.4
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 2.8e-23 112.5 129 48.8
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 3.7e-23 112.1 118 52.5
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 4.8e-23 111.7 144 44.4
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 4.8e-23 111.7 133 48.1
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 4.8e-23 111.7 119 50.4
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 6.3e-23 111.3 143 44.8
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.1e-22 110.5 117 48.7
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-22 109.8 116 50.9
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.4e-22 109.4 130 43.8
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 7.0e-22 107.8 149 41.6
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.5e-21 106.7 144 45.8
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 1.3e-20 103.6 117 48.7
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 3.6e-18 95.5 129 41.9
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 2.6e-16 89.4 118 42.4
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 3.7e-15 85.5 116 41.4
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.1e-14 84.0 89 52.8
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 2.0e-13 79.7 64 60.9
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 3.5e-13 79.0 74 55.4
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.8e-12 75.5 79 53.2
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 4.7e-10 68.6 108 38.0


User provided reference genes

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