Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 1.3e-93 346.3 165 100.0
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 5.0e-53 211.5 165 60.6
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 2.5e-52 209.1 159 62.9
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 2.5e-52 209.1 163 60.1
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 2.5e-52 209.1 159 61.6
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 4.3e-52 208.4 159 62.9
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 7.3e-52 207.6 159 62.9
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 7.3e-52 207.6 159 62.3
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 7.3e-52 207.6 162 60.5
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 9.5e-52 207.2 160 63.8
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 9.5e-52 207.2 159 61.6
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 1.2e-51 206.8 159 61.6
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 1.2e-51 206.8 159 61.6
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 1.2e-51 206.8 159 61.6
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 1.6e-51 206.5 154 61.7
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 2.1e-51 206.1 159 61.0
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 3.6e-51 205.3 159 61.0
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 3.6e-51 205.3 159 60.4
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 3.6e-51 205.3 159 60.4
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 4.7e-51 204.9 159 62.3
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 4.7e-51 204.9 163 58.9
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 8.1e-51 204.1 159 59.7
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 8.1e-51 204.1 159 59.7
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 1.1e-50 203.8 159 61.0
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 1.1e-50 203.8 159 61.0
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 1.1e-50 203.8 159 60.4
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 1.4e-50 203.4 159 57.9
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 2.3e-50 202.6 159 58.5
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 3.1e-50 202.2 160 58.8
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 5.2e-50 201.4 159 59.7
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 8.9e-50 200.7 158 60.1
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 8.9e-50 200.7 159 59.1
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 8.9e-50 200.7 160 60.6
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 1.2e-49 200.3 153 61.4
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 1.5e-49 199.9 158 60.8
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 2.0e-49 199.5 159 59.1
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 3.4e-49 198.7 160 56.9
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 4.4e-49 198.4 159 57.2
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 4.4e-49 198.4 160 59.4
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 4.4e-49 198.4 153 60.1
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 5.8e-49 198.0 159 59.7
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 5.8e-49 198.0 160 58.8
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 7.5e-49 197.6 154 59.1
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 7.5e-49 197.6 159 57.2
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 7.5e-49 197.6 161 58.4
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 9.8e-49 197.2 159 57.2
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 9.8e-49 197.2 154 60.4
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 9.8e-49 197.2 158 59.5
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.7e-48 196.4 160 58.8
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 1.7e-48 196.4 159 57.2
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 2.9e-48 195.7 159 58.5
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 3.7e-48 195.3 159 57.9
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 3.7e-48 195.3 158 58.2
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 6.4e-48 194.5 158 56.3
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 6.4e-48 194.5 154 58.4
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 1.1e-47 193.7 159 56.6
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 1.4e-47 193.4 149 58.4
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 1.4e-47 193.4 159 57.2
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 1.4e-47 193.4 152 59.9
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 1.4e-47 193.4 159 58.5
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 1.4e-47 193.4 159 58.5
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 2.4e-47 192.6 162 56.8
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 2.4e-47 192.6 154 60.4
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 3.2e-47 192.2 159 55.3
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 4.1e-47 191.8 159 56.6
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 5.4e-47 191.4 159 57.9
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 5.4e-47 191.4 159 55.3
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 9.2e-47 190.7 160 56.2
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 9.2e-47 190.7 159 55.3
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 9.2e-47 190.7 159 57.2
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.2e-46 190.3 159 55.3
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 1.6e-46 189.9 160 57.5
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 2.1e-46 189.5 155 56.8
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 6.0e-46 188.0 159 57.9
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 7.8e-46 187.6 155 58.7
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 1.7e-45 186.4 160 55.6
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 2.3e-45 186.0 160 57.5
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 2.3e-45 186.0 159 57.2
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 2.3e-45 186.0 159 56.0
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 3.0e-45 185.7 159 55.3
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 3.9e-45 185.3 158 58.2
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 6.6e-45 184.5 159 56.0
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 9.5e-44 180.6 151 56.3
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.2e-43 180.3 160 53.8
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 2.1e-43 179.5 137 60.6
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 3.6e-43 178.7 156 54.5
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 2.2e-40 169.5 200 45.5
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 8.4e-40 167.5 138 58.0
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 3.9e-37 158.7 122 58.2
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 8.9e-34 147.5 117 56.4
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 2.6e-33 146.0 256 34.8
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 2.6e-33 146.0 125 56.0
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 7.8e-30 134.4 82 69.5
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 1.1e-28 130.6 79 68.4
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 9.6e-28 127.5 91 62.6
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 4.8e-27 125.2 80 66.2
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 1.9e-23 113.2 107 52.3
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 1.1e-15 87.4 92 52.2
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 3.5e-14 82.4 81 53.1
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 6.0e-14 81.6 85 47.1
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 7.9e-14 81.3 80 51.2
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 6.7e-13 78.2 80 51.2
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 3.3e-12 75.9 80 51.2
PRCOL_00005528 Prasinoderma coloniale HOM05D007259 ORTHO05D009158 2.1e-11 73.2 184 29.9
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.5e-09 67.0 81 45.7
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 5.8e-09 65.1 70 54.3


User provided reference genes

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