Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0083 Selaginella moellendorffii HOM05D001995 ORTHO05D001952 0.0e+00 1238.4 654 100.0
THA.LOC104803800 Tarenaya hassleriana HOM05D001995 ORTHO05D001952 3.9e-16 90.9 349 30.4
Pp3c7_10630 Physcomitrium patens HOM05D001995 ORTHO05D001952 1.1e-13 82.8 431 29.5
BraA04t17595Z Brassica rapa HOM05D001995 ORTHO05D001952 1.8e-13 82.0 337 27.6
Cfa017922 Carpinus fangiana HOM05D001995 ORTHO05D001952 1.5e-12 79.0 747 24.8
BcaB06g29615 Brassica carinata HOM05D001995 ORTHO05D001952 3.5e-12 77.8 595 28.7
SEGI_35205 Sequoiadendron giganteum HOM05D001995 ORTHO05D001952 7.7e-12 76.6 40 87.5
Nitab4.5_0001107g0080 Nicotiana tabacum HOM05D001995 ORTHO05D001952 1.0e-11 76.3 688 26.0
unitig_748.g7515 Utricularia gibba HOM05D001995 ORTHO05D001952 1.7e-11 75.5 325 27.7
AagrBONN_evm.TU.Sc2ySwM_340.96 Anthoceros agrestis HOM05D001995 ORTHO05D001952 3.8e-11 74.3 480 26.2
PGR044G1907 Punica granatum HOM05D001995 ORTHO05D001952 5.0e-11 73.9 523 26.4
Thhalv10001926m.g Eutrema salsugineum HOM05D001995 ORTHO05D001952 6.5e-11 73.6 592 26.4
MD15G1062000 Malus domestica HOM05D001995 ORTHO05D001952 6.5e-11 73.6 381 29.4
CiPaw.15G042600 Carya illinoinensis HOM05D001995 ORTHO05D001952 1.1e-10 72.8 739 24.4
QL02p001761 Quercus lobata HOM05D001995 ORTHO05D001952 1.1e-10 72.8 167 34.7
SMO115G0085 Selaginella moellendorffii HOM05D001995 ORTHO05D001952 1.1e-10 72.8 761 25.1
AT2G25930 Arabidopsis thaliana HOM05D001995 ORTHO05D001952 1.4e-10 72.4 367 28.9
A04p20140 Brassica napus HOM05D001995 ORTHO05D001952 1.9e-10 72.0 571 26.4
AL4G18010 Arabidopsis lyrata HOM05D001995 ORTHO05D001952 2.5e-10 71.6 354 28.0
Dinv27956 Davidia involucrata HOM05D001995 ORTHO05D001952 2.5e-10 71.6 377 27.3
Nitab4.5_0000359g0210 Nicotiana tabacum HOM05D001995 ORTHO05D001952 2.5e-10 71.6 699 25.9
Sopen12g031800 Solanum pennellii HOM05D001995 ORTHO05D001952 3.2e-10 71.2 361 28.0
THA.LOC104803738 Tarenaya hassleriana HOM05D001995 ORTHO05D001952 3.2e-10 71.2 521 27.1
PSO210G0260 Papaver somniferum HOM05D001995 ORTHO05D001952 4.2e-10 70.9 778 23.9
SEGI_20302 Sequoiadendron giganteum HOM05D001995 ORTHO05D001952 5.5e-10 70.5 48 70.8
Carub.0004s0579 Capsella rubella HOM05D001995 ORTHO05D001952 7.2e-10 70.1 359 28.7
Zm00001eb297250 Zea mays HOM05D001995 ORTHO05D001952 7.2e-10 70.1 551 26.3
Eucgr.C02997 Eucalyptus grandis HOM05D001995 ORTHO05D001952 9.4e-10 69.7 735 24.8
Peaxi162Scf00840g00014 Petunia axillaris HOM05D001995 ORTHO05D001952 1.6e-09 68.9 681 25.6
Prupe.1G416000 Prunus persica HOM05D001995 ORTHO05D001952 2.1e-09 68.6 385 28.3
CAN.G208.72 Capsicum annuum HOM05D001995 ORTHO05D001952 2.7e-09 68.2 359 28.4
Lsat_1_v5_gn_6_7561 Lactuca sativa HOM05D001995 ORTHO05D001952 2.7e-09 68.2 477 26.0
Actinidia09014 Actinidia chinensis HOM05D001995 ORTHO05D001952 3.6e-09 67.8 379 25.9
GSVIVG01035337001 Vitis vinifera HOM05D001995 ORTHO05D001952 3.6e-09 67.8 704 24.9
Actinidia21732 Actinidia chinensis HOM05D001995 ORTHO05D001952 6.1e-09 67.0 81 46.9
Haze_18227 Corylus avellana HOM05D001995 ORTHO05D001952 6.1e-09 67.0 38 76.3
SalBow1G4435 Salvia bowleyana HOM05D001995 ORTHO05D001952 6.1e-09 67.0 719 26.4
Actinidia39127 Actinidia chinensis HOM05D001995 ORTHO05D001952 8.0e-09 66.6 396 25.8
MSTRG.25934 Avicennia marina HOM05D001995 ORTHO05D001952 8.0e-09 66.6 751 24.0
CANSAT35G0680 Cannabis sativa HOM05D001995 ORTHO05D001952 1.8e-08 65.5 366 25.7
HanXRQChr02g0047961 Helianthus annuus HOM05D001995 ORTHO05D001952 2.3e-08 65.1 512 25.4
HanXRQChr04g0118841 Helianthus annuus HOM05D001995 ORTHO05D001952 2.3e-08 65.1 539 24.7
Lalb_Chr22g0355951 Lupinus albus HOM05D001995 ORTHO05D001952 2.3e-08 65.1 745 23.8
PGSC0003DMG400025519 Solanum tuberosum HOM05D001995 ORTHO05D001952 2.3e-08 65.1 685 25.0
CSS0015755 Camellia sinensis var. sinensis HOM05D001995 ORTHO05D001952 3.9e-08 64.3 50 58.0
Duzib187G1876 Durio zibethinus HOM05D001995 ORTHO05D001952 3.9e-08 64.3 410 26.1
Solyc12g095900.2 Solanum lycopersicum HOM05D001995 ORTHO05D001952 3.9e-08 64.3 355 26.8
EL10Ac9g21159 Beta vulgaris HOM05D001995 ORTHO05D001952 5.2e-08 63.9 51 64.7
Nitab4.5_0005029g0030 Nicotiana tabacum HOM05D001995 ORTHO05D001952 5.2e-08 63.9 689 25.5
Gohir.A05G132932 Gossypium hirsutum HOM05D001995 ORTHO05D001952 6.7e-08 63.5 112 38.4
PGSC0003DMG400029303 Solanum tuberosum HOM05D001995 ORTHO05D001952 6.7e-08 63.5 358 27.9
SGA_v2.0_scaffold163G38043 Striga asiatica HOM05D001995 ORTHO05D001952 6.7e-08 63.5 449 23.4
Gohir.D09G080800 Gossypium hirsutum HOM05D001995 ORTHO05D001952 8.8e-08 63.2 377 26.8
C04p55850 Brassica napus HOM05D001995 ORTHO05D001952 1.1e-07 62.8 514 26.8
AUR62022273 Chenopodium quinoa HOM05D001995 ORTHO05D001952 1.1e-07 62.8 324 26.5
HPP92_005216 Vanilla planifolia HOM05D001995 ORTHO05D001952 1.1e-07 62.8 36 72.2
PSO210G6919 Papaver somniferum HOM05D001995 ORTHO05D001952 1.5e-07 62.4 778 22.5
Lj8A559T41 Lonicera japonica HOM05D001995 ORTHO05D001952 2.0e-07 62.0 731 24.2
Gorai.006G096400 Gossypium raimondii HOM05D001995 ORTHO05D001952 2.6e-07 61.6 375 26.4
Nitab4.5_0000664g0010 Nicotiana tabacum HOM05D001995 ORTHO05D001952 2.6e-07 61.6 709 25.7
Nitab4.5_0012527g0020 Nicotiana tabacum HOM05D001995 ORTHO05D000022 2.6e-07 61.6 44 61.4
Sp4g05820 Schrenkiella parvula HOM05D001995 ORTHO05D001952 2.6e-07 61.6 526 26.6
TPR.G981 Trifolium pratense HOM05D001995 ORTHO05D001952 3.3e-07 61.2 35 77.1
Zm00001eb159890 Zea mays HOM05D001995 ORTHO05D001952 3.3e-07 61.2 572 26.6
Ciclev10007592m.g Citrus clementina HOM05D001995 ORTHO05D001952 4.4e-07 60.8 749 25.4
Gohir.D07G023200 Gossypium hirsutum HOM05D001995 ORTHO05D001952 4.4e-07 60.8 726 24.0
Actinidia30297 Actinidia chinensis HOM05D001995 ORTHO05D001952 5.7e-07 60.5 46 60.9
Gohir.A09G080800 Gossypium hirsutum HOM05D001995 ORTHO05D001952 5.7e-07 60.5 375 26.7
TPR.G8759 Trifolium pratense HOM05D001995 ORTHO05D001952 7.4e-07 60.1 36 69.4
Gorai.001G024000 Gossypium raimondii HOM05D001995 ORTHO05D001952 9.7e-07 59.7 726 23.8
PGR031G2454 Punica granatum HOM05D001995 ORTHO05D001952 9.7e-07 59.7 494 24.9
THA.LOC104818577 Tarenaya hassleriana HOM05D001995 ORTHO05D001952 1.3e-06 59.3 39 66.7
ClCG08G016870 Citrullus lanatus HOM05D001995 ORTHO05D001952 1.7e-06 58.9 57 54.4
Rhsim07G0144400 Rhododendron simsii HOM05D001995 ORTHO05D001952 1.7e-06 58.9 166 31.3
CBR_g6559 Chara braunii HOM05D048098 ORTHO05D001952 2.2e-06 58.5 46 63.0
arahy.Tifrunner.gnm1.ann1.MX5F6R Arachis hypogaea HOM05D001995 ORTHO05D001952 2.8e-06 58.2 703 23.6
Ca_15878_v3 Cicer arietinum L. HOM05D001995 ORTHO05D001952 2.8e-06 58.2 378 27.5
Ca_23288_v3 Cicer arietinum L. HOM05D001995 ORTHO05D001952 2.8e-06 58.2 33 72.7
Gohir.D07G023300 Gossypium hirsutum HOM05D001995 ORTHO05D001952 2.8e-06 58.2 725 23.4
Lsat_1_v5_gn_3_25981 Lactuca sativa HOM05D001995 ORTHO05D001952 2.8e-06 58.2 523 26.2
Gorai.001G024100 Gossypium raimondii HOM05D001995 ORTHO05D001952 3.7e-06 57.8 723 23.5
Lalb_Chr25g0280481 Lupinus albus HOM05D001995 ORTHO05D001952 3.7e-06 57.8 36 66.7
Medtr3g103970 Medicago truncatula HOM05D001995 ORTHO05D001952 3.7e-06 57.8 717 23.4
Nitab4.5_0008736g0010 Nicotiana tabacum HOM05D001995 ORTHO05D001952 4.8e-06 57.4 348 27.9
Gohir.A07G022156 Gossypium hirsutum HOM05D001995 ORTHO05D001952 6.3e-06 57.0 723 22.7
MBI04_g12187_MAGBIO Magnolia biondii HOM05D001995 ORTHO05D001952 8.2e-06 56.6 639 24.1


User provided reference genes

Program Settings