Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0046 Selaginella moellendorffii HOM05D005730 ORTHO05D007038 1.8e-40 168.7 79 100.0
Pp3c25_300 Physcomitrium patens HOM05D005730 ORTHO05D007038 2.6e-15 85.1 74 50.0
TWI63G0907 Tripterygium wilfordii HOM05D005730 ORTHO05D007038 5.4e-13 77.4 70 51.4
Pp3c16_220 Physcomitrium patens HOM05D005730 ORTHO05D007038 1.2e-12 76.3 74 44.6
Lalb_Chr14g0361711 Lupinus albus HOM05D005730 ORTHO05D007038 3.5e-12 74.7 71 46.5
Cfa020734 Carpinus fangiana HOM05D005730 ORTHO05D007038 4.6e-12 74.3 71 50.7
Migut.J00829 Erythranthe guttata HOM05D005730 ORTHO05D007038 4.6e-12 74.3 70 48.6
Migut.L00209 Erythranthe guttata HOM05D005730 ORTHO05D007038 4.6e-12 74.3 70 48.6
GSVIVG01029731001 Vitis vinifera HOM05D005730 ORTHO05D007038 4.6e-12 74.3 71 52.1
CDE06G0649 Ceratophyllum demersum HOM05D005730 ORTHO05D007038 1.8e-11 72.4 71 46.5
Duzib177G0654 Durio zibethinus HOM05D005730 ORTHO05D007038 2.3e-11 72.0 71 47.9
unitig_26.g9132 Utricularia gibba HOM05D005730 ORTHO05D007038 3.0e-11 71.6 70 45.7
Os01g0750800 Oryza sativa ssp. japonica HOM05D005730 ORTHO05D007038 3.9e-11 71.2 71 49.3
QL11p009271 Quercus lobata HOM05D005730 ORTHO05D007038 3.9e-11 71.2 71 46.5
Aqoxy7G02690 Aquilegia oxysepala HOM05D005730 ORTHO05D007038 5.1e-11 70.9 71 47.9
CiPaw.16G103100 Carya illinoinensis HOM05D005730 ORTHO05D007038 5.1e-11 70.9 71 49.3
Lj2g0002952 Lotus japonicus HOM05D005730 ORTHO05D007038 5.1e-11 70.9 71 47.9
Psat1g051120 Pisum sativum HOM05D005730 ORTHO05D007038 5.1e-11 70.9 70 48.6
arahy.Tifrunner.gnm1.ann1.8U1ME7 Arachis hypogaea HOM05D005730 ORTHO05D007038 6.7e-11 70.5 71 45.1
arahy.Tifrunner.gnm1.ann1.YLZA1F Arachis hypogaea HOM05D005730 ORTHO05D007038 6.7e-11 70.5 71 45.1
MD16G1239700 Malus domestica HOM05D005730 ORTHO05D007038 6.7e-11 70.5 71 45.1
Mapoly0005s0214 Marchantia polymorpha HOM05D005730 ORTHO05D007038 6.7e-11 70.5 71 42.3
Prupe.1G065800 Prunus persica HOM05D005730 ORTHO05D007038 6.7e-11 70.5 71 46.5
Aa31LG5G7440 Aethionema arabicum HOM05D005730 ORTHO05D007038 8.7e-11 70.1 71 43.7
Os01g0732100 Oryza sativa ssp. japonica HOM05D005730 ORTHO05D007038 8.7e-11 70.1 71 47.9
Zm00001eb368480 Zea mays HOM05D005730 ORTHO05D007038 8.7e-11 70.1 71 47.9
CsaV3_1G004610 Cucumis sativus L. HOM05D005730 ORTHO05D007038 1.1e-10 69.7 70 47.1
MD13G1234900 Malus domestica HOM05D005730 ORTHO05D007038 1.1e-10 69.7 71 46.5
PGR142G0999 Punica granatum HOM05D005730 ORTHO05D007038 1.1e-10 69.7 71 45.1
THA.LOC104815318 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 1.1e-10 69.7 71 45.1
THA.LOC109116496 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 1.1e-10 69.7 71 45.1
THA.LOC109117265 Tarenaya hassleriana HOM05D005730 ORTHO05D007038 1.1e-10 69.7 71 45.1
Thhalv10017500m.g Eutrema salsugineum HOM05D005730 ORTHO05D007038 1.5e-10 69.3 71 45.1
FvH4_4g06270 Fragaria vesca HOM05D005730 ORTHO05D007038 1.5e-10 69.3 71 46.5
FAN12G2290 Fragaria x ananassa HOM05D005730 ORTHO05D007038 1.5e-10 69.3 71 46.5
RcHm_v2.0_Chr4g0397991 Rosa chinensis HOM05D005730 ORTHO05D007038 1.5e-10 69.3 71 46.5
Sp4g13950 Schrenkiella parvula HOM05D005730 ORTHO05D007038 1.5e-10 69.3 71 45.1
SGA_v2.0_scaffold143G35734 Striga asiatica HOM05D005730 ORTHO05D007038 1.5e-10 69.3 70 48.6
Atru.chr10.916 Acer truncatum HOM05D005730 ORTHO05D007038 1.9e-10 68.9 71 45.1
Atru.chr10.931 Acer truncatum HOM05D005730 ORTHO05D007038 1.9e-10 68.9 71 45.1
Cc00_g00480 Coffea canephora HOM05D005730 ORTHO05D007038 1.9e-10 68.9 71 45.1
Duzib170G0040 Durio zibethinus HOM05D005730 ORTHO05D007038 1.9e-10 68.9 71 45.1
Nitab4.5_0004188g0020 Nicotiana tabacum HOM05D005730 ORTHO05D007038 1.9e-10 68.9 71 45.1
Thecc.06G194900 Theobroma cacao HOM05D005730 ORTHO05D007038 1.9e-10 68.9 71 43.7
Actinidia38519 Actinidia chinensis HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 45.1
AL4G26750 Arabidopsis lyrata HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
AT2G31490 Arabidopsis thaliana HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
BcaC02g07993 Brassica carinata HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
A03p17640 Brassica napus HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
A04p24230 Brassica napus HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
C03p20730 Brassica napus HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
BolC3t14450H Brassica oleracea HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
BolC4t23397H Brassica oleracea HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
BolC4t27587H Brassica oleracea HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
BraA03t11029Z Brassica rapa HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
Carub.0004s1281 Capsella rubella HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
CARHR125130 Cardamine hirsuta HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
Ciclev10010105m.g Citrus clementina HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 45.1
Sed0021240 Sechium edule HOM05D005730 ORTHO05D007038 2.5e-10 68.6 68 45.6
TAR383G0493 Trochodendron aralioides HOM05D005730 ORTHO05D007038 2.5e-10 68.6 71 43.7
CSS0014288 Camellia sinensis var. sinensis HOM05D005730 ORTHO05D007038 3.3e-10 68.2 71 43.7
Gohir.A03G029700 Gossypium hirsutum HOM05D005730 ORTHO05D007038 4.3e-10 67.8 71 43.7
MELO3C017388.2 Cucumis melo HOM05D005730 ORTHO05D007038 5.6e-10 67.4 70 45.7
Phvul.004G177400 Phaseolus vulgaris HOM05D005730 ORTHO05D007038 5.6e-10 67.4 71 43.7
Phvul.010G060700 Phaseolus vulgaris HOM05D005730 ORTHO05D007038 5.6e-10 67.4 71 45.1
Sc09g0007480 Simmondsia chinensis HOM05D005730 ORTHO05D007038 5.6e-10 67.4 71 45.1
Sopen05g027690 Solanum pennellii HOM05D005730 ORTHO05D007038 5.6e-10 67.4 71 43.7
Ah.10g033660 Amaranthus hybridus HOM05D005730 ORTHO05D007038 7.4e-10 67.0 71 42.3
TPR.G21357 Trifolium pratense HOM05D005730 ORTHO05D007038 7.4e-10 67.0 70 45.7
VMungo0464G0384 Vigna mungo HOM05D002151 ORTHO05D002142 7.4e-10 67.0 78 39.7
Gohir.D03G138800 Gossypium hirsutum HOM05D005730 ORTHO05D007038 9.6e-10 66.6 71 43.7
Gorai.003G145600 Gossypium raimondii HOM05D005730 ORTHO05D007038 9.6e-10 66.6 71 43.7
Lsat_1_v5_gn_7_59680 Lactuca sativa HOM05D005730 ORTHO05D007038 9.6e-10 66.6 71 43.7
PSO063G5181 Papaver somniferum HOM05D005730 ORTHO05D007038 9.6e-10 66.6 70 41.4
Glyma.07G130200 Glycine max HOM05D005730 ORTHO05D007038 1.3e-09 66.2 71 43.7
PSO170G3580 Papaver somniferum HOM05D005730 ORTHO05D007038 1.3e-09 66.2 70 40.0
Dinv06659 Davidia involucrata HOM05D005730 ORTHO05D007038 1.6e-09 65.9 71 42.3
HanXRQChr03g0064531 Helianthus annuus HOM05D005730 ORTHO05D007038 1.6e-09 65.9 71 42.3
HanXRQChr09g0243241 Helianthus annuus HOM05D005730 ORTHO05D007038 1.6e-09 65.9 71 42.3
Manes.04G088600 Manihot esculenta HOM05D005730 ORTHO05D007038 1.6e-09 65.9 71 43.7
Eucgr.D02622 Eucalyptus grandis HOM05D005730 ORTHO05D007038 2.8e-09 65.1 71 43.7
Potri.006G077400 Populus trichocarpa HOM05D005730 ORTHO05D007038 2.8e-09 65.1 71 42.3
Manes.11G087000 Manihot esculenta HOM05D005730 ORTHO05D007038 4.8e-09 64.3 71 40.8
CANSAT01G0847 Cannabis sativa HOM05D005730 ORTHO05D007038 6.2e-09 63.9 71 40.8
ClCG06G014030 Citrullus lanatus HOM05D005730 ORTHO05D007038 6.2e-09 63.9 69 42.0
Nn2g12785 Nelumbo nucifera HOM05D005730 ORTHO05D007038 8.1e-09 63.5 71 40.8
BcaB01g04043 Brassica carinata HOM05D005730 ORTHO05D007038 1.1e-08 63.2 67 43.3
BcaB02g10394 Brassica carinata HOM05D005730 ORTHO05D007038 1.1e-08 63.2 67 43.3
RcHm_v2.0_Chr6g0293611 Rosa chinensis HOM05D005730 ORTHO05D007038 1.1e-08 63.2 71 42.3
BcaB06g28537 Brassica carinata HOM05D005730 ORTHO05D007038 1.8e-08 62.4 67 41.8
Zm00001eb370910 Zea mays HOM05D005730 ORTHO05D007038 1.2e-07 59.7 71 45.1
SHI37948 Sapria himalayana HOM05D005730 ORTHO05D007038 3.4e-07 58.2 67 43.3
Peaxi162Scf00320g00055 Petunia axillaris HOM05D005730 ORTHO05D007038 7.6e-07 57.0 60 45.0
HPP92_021358 Vanilla planifolia HOM05D005730 ORTHO05D007038 7.6e-07 57.0 71 40.8
RcHm_v2.0_Chr6g0293601 Rosa chinensis HOM05D005730 ORTHO05D007038 1.7e-06 55.8 67 41.8
SEGI_08291 Sequoiadendron giganteum HOM05D005730 ORTHO05D007038 1.7e-06 55.8 56 44.6
Solyc09g059220.1 Solanum lycopersicum HOM05D005730 ORTHO05D007038 2.2e-06 55.5 70 35.7
Peaxi162Scf00906g00224 Petunia axillaris HOM05D005730 ORTHO05D007038 3.8e-06 54.7 56 46.4
Ca_25629_v3 Cicer arietinum L. HOM05D005730 ORTHO05D007038 4.9e-06 54.3 57 43.9
Peaxi162Scf00204g00039 Petunia axillaris HOM05D005730 ORTHO05D007038 4.9e-06 54.3 71 39.4


User provided reference genes

Program Settings