Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 7.0e-104 380.6 184 100.0
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.1e-56 223.8 185 57.3
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.0e-54 217.2 184 51.1
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.7e-54 216.5 185 56.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 3.0e-54 215.7 184 53.3
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 8.7e-54 214.2 185 54.6
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.5e-53 213.4 185 56.2
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 7.3e-53 211.1 185 53.5
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 9.6e-53 210.7 185 54.1
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 9.6e-53 210.7 184 51.6
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.6e-52 209.9 185 54.1
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 3.6e-52 208.8 185 54.1
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 3.6e-52 208.8 185 53.0
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 6.2e-52 208.0 185 53.0
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 8.1e-52 207.6 185 53.0
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 8.1e-52 207.6 185 53.0
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 8.1e-52 207.6 185 53.5
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.4e-51 206.8 185 55.1
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 1.4e-51 206.8 185 54.1
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 5.3e-51 204.9 185 52.4
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.2e-50 203.8 185 53.0
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 1.5e-50 203.4 185 53.0
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 3.4e-50 202.2 185 52.4
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 4.5e-50 201.8 184 52.7
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 4.5e-50 201.8 185 53.5
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 9.9e-50 200.7 185 50.8
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.3e-49 200.3 185 50.3
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.7e-49 199.9 207 48.3
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 1.7e-49 199.9 185 50.8
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 2.2e-49 199.5 185 53.0
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.2e-49 199.5 185 51.9
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.2e-49 199.5 201 50.2
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 2.9e-49 199.1 185 50.3
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 6.4e-49 198.0 185 49.2
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 6.4e-49 198.0 185 51.9
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 6.4e-49 198.0 184 49.5
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 6.4e-49 198.0 184 49.5
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 8.4e-49 197.6 185 51.4
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.1e-48 197.2 185 49.2
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.1e-48 197.2 185 50.3
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 1.1e-48 197.2 185 50.8
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 1.4e-48 196.8 185 51.4
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 4.2e-48 195.3 185 50.3
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 7.1e-48 194.5 187 48.1
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 7.1e-48 194.5 181 51.4
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 7.1e-48 194.5 185 48.1
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 9.3e-48 194.1 177 52.0
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.2e-47 193.7 187 48.1
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.2e-47 193.7 181 49.2
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.2e-47 193.7 185 50.3
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 1.6e-47 193.4 187 49.2
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 2.1e-47 193.0 187 48.1
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 2.7e-47 192.6 185 49.2
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 3.5e-47 192.2 187 48.1
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 3.5e-47 192.2 185 49.7
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.0e-46 190.7 187 47.1
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.0e-46 190.7 185 49.7
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.8e-46 189.9 187 47.1
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.8e-46 189.9 216 45.8
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 3.0e-46 189.1 185 50.3
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 3.9e-46 188.7 185 49.2
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 5.1e-46 188.3 187 46.0
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 8.7e-46 187.6 185 48.6
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 8.7e-46 187.6 187 46.5
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.1e-45 187.2 185 47.0
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.9e-45 186.4 185 47.6
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 2.5e-45 186.0 181 50.3
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 2.5e-45 186.0 185 49.7
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 4.3e-45 185.3 185 45.9
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 5.6e-45 184.9 185 49.2
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 5.6e-45 184.9 186 49.5
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.3e-44 183.7 197 45.2
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.8e-43 179.9 185 49.2
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.8e-43 179.9 213 42.7
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 4.0e-43 178.7 156 56.4
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 7.6e-42 174.5 191 47.6
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 1.0e-41 174.1 185 47.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 5.5e-40 168.3 272 36.0
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 7.1e-40 167.9 139 59.0
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.6e-39 166.8 140 52.9
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 7.9e-39 164.5 190 46.3
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.3e-38 163.7 141 54.6
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.1e-37 160.6 148 53.4
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.1e-37 160.6 183 43.2
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.1e-37 160.6 150 50.0
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.3e-37 158.7 145 53.1
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 4.8e-36 155.2 214 39.7
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.4e-35 153.7 150 49.3
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 5.3e-35 151.8 194 40.7
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.9e-32 143.3 165 44.8
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 6.1e-31 138.3 144 43.1
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 4.3e-29 132.1 166 42.2
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 4.1e-27 125.6 185 41.1
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.9e-25 119.4 110 50.0
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.9e-25 119.4 155 42.6
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 2.0e-21 106.7 100 49.0
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 1.3e-17 94.0 198 32.3
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 3.9e-14 82.4 208 29.8
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 8.8e-14 81.3 85 48.2
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.0e-13 80.1 98 43.9
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.2e-12 76.6 65 52.3
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 4.5e-10 68.9 53 52.8
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.5e-08 63.9 55 54.5


User provided reference genes

Program Settings