Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 3.9e-122 441.4 213 100.0
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 7.3e-20 101.7 263 29.7
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.6e-19 100.5 232 30.6
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 3.1e-18 96.3 213 31.5
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 8.9e-18 94.7 197 33.5
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.2e-17 94.4 226 31.4
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 3.4e-17 92.8 120 41.7
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 4.4e-17 92.4 230 30.9
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 7.5e-17 91.7 230 30.0
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.7e-16 90.5 227 26.0
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 2.2e-16 90.1 214 30.4
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 2.9e-16 89.7 176 34.1
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 2.9e-16 89.7 225 29.8
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 2.9e-16 89.7 112 37.5
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 4.9e-16 89.0 226 29.6
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 6.4e-16 88.6 230 30.0
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 8.3e-16 88.2 234 29.9
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 8.3e-16 88.2 233 26.6
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.1e-15 87.8 111 38.7
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.1e-15 87.8 111 38.7
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.4e-15 87.4 112 39.3
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.4e-15 87.4 113 38.9
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 1.9e-15 87.0 204 32.4
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 2.4e-15 86.7 110 39.1
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 2.4e-15 86.7 224 27.2
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 2.4e-15 86.7 112 39.3
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 4.1e-15 85.9 117 35.9
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 5.4e-15 85.5 116 37.1
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 7.0e-15 85.1 214 29.9
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 7.0e-15 85.1 112 37.5
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 7.0e-15 85.1 225 29.8
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 9.2e-15 84.7 109 36.7
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 9.2e-15 84.7 113 38.1
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 9.2e-15 84.7 228 28.9
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 9.2e-15 84.7 233 27.9
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 1.2e-14 84.3 204 30.4
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 1.2e-14 84.3 113 38.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.2e-14 84.3 111 36.9
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 1.2e-14 84.3 220 27.3
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.2e-14 84.3 106 38.7
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.2e-14 84.3 242 27.7
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.2e-14 84.3 226 30.1
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.2e-14 84.3 117 35.0
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.6e-14 84.0 232 30.6
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.6e-14 84.0 108 38.0
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.6e-14 84.0 104 40.4
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 2.0e-14 83.6 105 38.1
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 2.0e-14 83.6 230 27.8
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 2.0e-14 83.6 218 30.7
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 2.7e-14 83.2 105 40.0
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 3.5e-14 82.8 116 34.5
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 4.6e-14 82.4 109 35.8
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 4.6e-14 82.4 106 37.7
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 6.0e-14 82.0 218 29.4
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 6.0e-14 82.0 105 38.1
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 6.0e-14 82.0 105 37.1
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 6.0e-14 82.0 105 37.1
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 7.8e-14 81.6 115 34.8
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.0e-13 81.3 106 37.7
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 1.0e-13 81.3 106 37.7
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.0e-13 81.3 105 37.1
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.3e-13 80.9 104 39.4
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 1.3e-13 80.9 106 38.7
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.3e-13 80.9 113 37.2
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.7e-13 80.5 122 32.8
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.7e-13 80.5 218 27.5
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 2.3e-13 80.1 105 37.1
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 2.3e-13 80.1 106 35.8
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 2.3e-13 80.1 103 38.8
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 2.3e-13 80.1 111 36.9
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 3.0e-13 79.7 106 37.7
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 3.0e-13 79.7 172 30.8
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 3.0e-13 79.7 117 34.2
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 3.9e-13 79.3 216 27.3
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 3.9e-13 79.3 107 37.4
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 3.9e-13 79.3 105 37.1
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 3.9e-13 79.3 217 29.0
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 5.0e-13 79.0 213 26.8
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 5.0e-13 79.0 212 26.9
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 5.0e-13 79.0 105 36.2
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 5.0e-13 79.0 105 36.2
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 5.0e-13 79.0 128 34.4
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 6.6e-13 78.6 110 34.5
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 8.6e-13 78.2 225 26.2
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.1e-12 77.8 115 33.9
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 1.5e-12 77.4 104 36.5
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.5e-12 77.4 118 34.7
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 2.5e-12 76.6 222 28.8
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 3.3e-12 76.3 105 36.2
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 3.3e-12 76.3 106 37.7
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 4.3e-12 75.9 117 32.5
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 5.6e-12 75.5 108 33.3
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 9.5e-12 74.7 235 27.7
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 9.5e-12 74.7 105 36.2
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.2e-11 74.3 221 26.7
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 1.6e-11 73.9 182 31.3
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 2.3e-10 70.1 60 46.7
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 8.3e-08 61.6 105 32.4
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 7.1e-07 58.5 159 27.0


User provided reference genes

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