Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO140G0075 Selaginella moellendorffii HOM05D002150 ORTHO05D002191 9.4e-144 513.8 328 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4306 Anthoceros agrestis HOM05D002150 ORTHO05D002191 1.6e-10 71.2 138 41.3
Haze_24076 Corylus avellana HOM05D002150 ORTHO05D002191 8.9e-09 65.5 163 36.2
SEGI_07847 Sequoiadendron giganteum HOM05D002150 ORTHO05D002191 8.9e-09 65.5 120 40.0
CANSAT54G0127 Cannabis sativa HOM05D002150 ORTHO05D002191 1.5e-08 64.7 155 34.8
MSTRG.18585 Avicennia marina HOM05D002150 ORTHO05D002191 3.4e-08 63.5 141 38.3
Duzib128G1760 Durio zibethinus HOM05D002150 ORTHO05D002191 3.4e-08 63.5 165 31.5
MBI14_g20632_MAGBIO Magnolia biondii HOM05D002150 ORTHO05D002191 3.4e-08 63.5 168 31.5
Duzib150G1281 Durio zibethinus HOM05D002150 ORTHO05D002191 9.8e-08 62.0 159 36.5
SGA_v2.0_scaffold230G43396 Striga asiatica HOM05D002150 ORTHO05D002191 1.3e-07 61.6 116 37.9
Sed0006133 Sechium edule HOM05D002150 ORTHO05D002191 2.2e-07 60.8 149 36.2
COL.COLO4_18490 Corchorus olitorius HOM05D002150 ORTHO05D002191 3.7e-07 60.1 142 35.9
Sed0027687 Sechium edule HOM05D002150 ORTHO05D002191 3.7e-07 60.1 148 35.1
Thecc.09G324000 Theobroma cacao HOM05D002150 ORTHO05D002191 3.7e-07 60.1 159 34.6
Duzib168G0932 Durio zibethinus HOM05D002150 ORTHO05D002191 4.9e-07 59.7 156 35.3
Manes.11G131700 Manihot esculenta HOM05D002150 ORTHO05D002191 4.9e-07 59.7 156 35.9
Gohir.A05G096500 Gossypium hirsutum HOM05D002150 ORTHO05D002191 6.4e-07 59.3 135 37.0
SEGI_31580 Sequoiadendron giganteum HOM05D002150 ORTHO05D002191 6.4e-07 59.3 130 36.9
Gohir.D05G096700 Gossypium hirsutum HOM05D002150 ORTHO05D002191 8.3e-07 58.9 135 37.0
Gorai.009G100200 Gossypium raimondii HOM05D002150 ORTHO05D002191 8.3e-07 58.9 135 37.0
Oeu054158.1 Olea europaea HOM05D002150 ORTHO05D002191 8.3e-07 58.9 133 39.8
PGR119G1724 Punica granatum HOM05D002150 ORTHO05D002191 8.3e-07 58.9 150 34.7
Gohir.A07G096700 Gossypium hirsutum HOM05D002150 ORTHO05D002191 1.1e-06 58.5 176 32.4
Lalb_Chr10g0091741 Lupinus albus HOM05D002150 ORTHO05D002191 1.1e-06 58.5 157 29.9
Glyma.02G093100 Glycine max HOM05D002150 ORTHO05D002191 1.4e-06 58.2 176 28.4
Phvul.008G012900 Phaseolus vulgaris HOM05D002150 ORTHO05D002191 1.4e-06 58.2 176 29.5
Duzib170G0504 Durio zibethinus HOM05D002150 ORTHO05D002191 1.9e-06 57.8 141 34.8
Glyma.18G289200 Glycine max HOM05D002150 ORTHO05D002191 1.9e-06 57.8 143 32.9
Gohir.D07G101201 Gossypium hirsutum HOM05D002150 ORTHO05D002191 1.9e-06 57.8 176 31.2
ClCG02G020280 Citrullus lanatus HOM05D002150 ORTHO05D002191 2.4e-06 57.4 157 33.1
Hma1.2p1_1263F.1_g271270 Hydrangea macrophylla HOM05D002150 ORTHO05D002191 2.4e-06 57.4 147 35.4
CSS0018575 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 3.2e-06 57.0 161 33.5
Lj1g0013000 Lotus japonicus HOM05D002150 ORTHO05D002191 3.2e-06 57.0 144 34.0
Nn2g10398 Nelumbo nucifera HOM05D002150 ORTHO05D002191 3.2e-06 57.0 183 30.1
VMungo1383G0536 Vigna mungo HOM05D002150 ORTHO05D002191 3.2e-06 57.0 179 29.6
Manes.04G033700 Manihot esculenta HOM05D002150 ORTHO05D002191 4.1e-06 56.6 152 34.2
Ciclev10032119m.g Citrus clementina HOM05D002150 ORTHO05D002191 5.4e-06 56.2 161 31.1
Lj1P935T28 Lonicera japonica HOM05D002150 ORTHO05D002191 5.4e-06 56.2 139 33.8
Manes.07G114700 Manihot esculenta HOM05D002150 ORTHO05D002191 5.4e-06 56.2 142 34.5
SMO146G0026 Selaginella moellendorffii HOM05D004777 ORTHO05D006240 5.4e-06 56.2 140 31.4
TWI38G0694 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 5.4e-06 56.2 160 35.6
ATR0559G086 Amborella trichopoda HOM05D002150 ORTHO05D002191 7.0e-06 55.8 173 30.6
MELO3C013692.2 Cucumis melo HOM05D002150 ORTHO05D002191 7.0e-06 55.8 155 32.9
FvH4_3g35750 Fragaria vesca HOM05D002150 ORTHO05D002191 7.0e-06 55.8 148 32.4
FAN11G3229 Fragaria x ananassa HOM05D002150 ORTHO05D002191 7.0e-06 55.8 148 32.4
FAN21G2799 Fragaria x ananassa HOM05D002150 ORTHO05D002191 7.0e-06 55.8 148 32.4
FAN25G2559 Fragaria x ananassa HOM05D002150 ORTHO05D002191 7.0e-06 55.8 148 32.4
HanXRQChr07g0201131 Helianthus annuus HOM05D002150 ORTHO05D002191 7.0e-06 55.8 160 32.5


User provided reference genes

Program Settings