Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.3e-57 226.1 110 100.0
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 4.0e-38 161.4 109 69.7
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 2.0e-37 159.1 112 67.0
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 3.7e-36 154.8 109 70.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 6.4e-36 154.1 109 65.1
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 1.1e-35 153.3 109 65.1
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 3.2e-35 151.8 109 65.1
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 4.1e-35 151.4 109 63.3
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 9.2e-35 150.2 109 63.3
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.6e-34 149.4 109 65.1
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-34 149.4 109 64.2
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.1e-34 149.1 109 63.3
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 2.1e-34 149.1 104 66.3
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.7e-34 148.7 109 64.2
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 3.5e-34 148.3 109 64.2
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 3.5e-34 148.3 109 62.4
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.5e-34 148.3 109 62.4
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 4.6e-34 147.9 109 64.2
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 4.6e-34 147.9 109 63.3
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 6.0e-34 147.5 109 63.3
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 7.8e-34 147.1 109 62.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 7.8e-34 147.1 109 63.3
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 7.8e-34 147.1 109 63.3
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 7.8e-34 147.1 109 62.4
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 7.8e-34 147.1 109 64.2
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 7.8e-34 147.1 109 62.4
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.0e-33 146.7 109 63.3
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 1.0e-33 146.7 109 62.4
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.3e-33 146.4 109 60.6
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 1.3e-33 146.4 109 63.3
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 1.7e-33 146.0 109 59.6
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.7e-33 146.0 109 61.5
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.7e-33 146.0 109 63.3
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.7e-33 146.0 109 61.5
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.7e-33 146.0 109 60.6
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 1.7e-33 146.0 109 62.4
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.3e-33 145.6 109 64.2
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.3e-33 145.6 109 58.7
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.3e-33 145.6 109 62.4
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 3.0e-33 145.2 109 59.6
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 3.0e-33 145.2 109 64.2
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 3.0e-33 145.2 109 60.6
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 3.9e-33 144.8 109 62.4
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 3.9e-33 144.8 109 60.6
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 5.0e-33 144.4 109 60.6
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 5.0e-33 144.4 109 60.6
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 5.0e-33 144.4 109 59.6
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 5.0e-33 144.4 109 60.6
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 6.6e-33 144.1 109 62.4
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 6.6e-33 144.1 109 61.5
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 8.6e-33 143.7 109 59.6
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 8.6e-33 143.7 109 59.6
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 8.6e-33 143.7 109 60.6
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 8.6e-33 143.7 109 59.6
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 8.6e-33 143.7 109 58.7
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 8.6e-33 143.7 109 65.1
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.1e-32 143.3 109 62.4
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.1e-32 143.3 109 62.4
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.1e-32 143.3 109 59.6
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.1e-32 143.3 109 60.6
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.5e-32 142.9 109 59.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 1.9e-32 142.5 109 58.7
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.9e-32 142.5 109 57.8
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.9e-32 142.5 109 59.6
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.5e-32 142.1 109 60.6
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 2.5e-32 142.1 109 59.6
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.5e-32 142.1 109 59.6
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 2.5e-32 142.1 109 58.7
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 3.3e-32 141.7 109 60.6
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 3.3e-32 141.7 104 59.6
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 3.3e-32 141.7 109 60.6
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 3.3e-32 141.7 109 60.6
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 3.3e-32 141.7 109 61.5
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 3.3e-32 141.7 109 60.6
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 3.3e-32 141.7 109 59.6
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 3.3e-32 141.7 109 56.9
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 4.3e-32 141.4 109 60.6
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 4.3e-32 141.4 109 58.7
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 4.3e-32 141.4 109 61.5
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 4.3e-32 141.4 109 58.7
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 5.6e-32 141.0 109 60.6
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 7.3e-32 140.6 109 59.6
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 9.5e-32 140.2 109 60.6
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 9.5e-32 140.2 109 60.6
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 9.5e-32 140.2 109 61.5
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.2e-31 139.8 109 58.7
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.2e-31 139.8 109 58.7
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.6e-31 139.4 101 62.4
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 2.1e-31 139.0 109 60.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 2.1e-31 139.0 109 58.7
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.8e-31 138.7 109 58.7
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 3.6e-31 138.3 109 59.6
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 3.6e-31 138.3 121 55.4
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 4.7e-31 137.9 109 57.8
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 4.7e-31 137.9 109 58.7
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 6.2e-31 137.5 109 59.6
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 8.1e-31 137.1 109 59.6
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.3e-30 135.6 130 52.3
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 3.1e-30 135.2 109 61.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 8.9e-30 133.7 131 51.1
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.2e-29 133.3 109 56.0
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.5e-29 132.9 102 58.8
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 2.0e-29 132.5 109 59.6
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 2.6e-29 132.1 96 63.5
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 4.4e-29 131.3 138 47.8
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 5.8e-29 131.0 135 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 2.9e-28 128.6 100 64.0
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 8.3e-28 127.1 105 56.2
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.4e-27 126.3 96 60.4
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.6e-26 122.9 89 66.3
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 4.6e-26 121.3 97 58.8
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 6.0e-26 120.9 114 52.6
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.1e-24 116.7 107 49.5
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 4.3e-24 114.8 160 40.0
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 4.3e-24 114.8 90 58.9
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 8.9e-22 107.1 76 64.5
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 3.4e-21 105.1 109 51.4
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 5.8e-21 104.4 93 51.6
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.3e-20 103.2 68 67.6
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.7e-20 102.8 67 67.2
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 2.9e-20 102.1 110 48.2
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 6.4e-20 100.9 70 64.3
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 8.4e-20 100.5 67 64.2
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 8.4e-20 100.5 67 64.2
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.4e-19 99.8 67 62.7
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.4e-19 99.8 67 62.7
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 5.8e-13 77.8 110 39.1
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 5.4e-11 71.2 56 57.1
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.2e-10 70.1 67 55.2


User provided reference genes

Program Settings