Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.2e-132 475.7 254 100.0
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.3e-128 461.5 252 97.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.4e-72 275.8 253 58.1
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.7e-72 275.0 254 59.4
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.7e-71 273.5 258 58.1
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.8e-70 270.0 253 57.3
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 9.2e-62 241.1 253 51.0
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 3.5e-61 239.2 253 50.6
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.8e-60 235.7 255 49.8
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 3.8e-60 235.7 253 49.4
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 8.6e-60 234.6 253 48.6
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 4.3e-59 232.3 253 49.8
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 5.6e-59 231.9 253 49.8
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 7.3e-59 231.5 253 50.6
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 7.3e-59 231.5 255 47.8
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 7.3e-59 231.5 255 47.8
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 7.3e-59 231.5 255 47.8
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 7.3e-59 231.5 253 49.0
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 9.5e-59 231.1 253 50.6
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 9.5e-59 231.1 253 49.4
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.2e-58 230.7 253 49.0
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.2e-58 230.7 253 47.4
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.2e-58 230.7 253 49.4
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.2e-58 230.7 253 50.6
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.2e-58 230.7 253 47.8
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.6e-58 230.3 252 49.6
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.1e-58 229.9 253 49.4
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.8e-58 229.6 253 49.8
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 3.6e-58 229.2 252 50.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 3.6e-58 229.2 253 49.0
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 4.7e-58 228.8 253 49.4
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 4.7e-58 228.8 253 47.0
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 4.7e-58 228.8 253 48.6
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 4.7e-58 228.8 253 48.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 4.7e-58 228.8 253 48.2
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 4.7e-58 228.8 282 48.2
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 4.7e-58 228.8 253 47.4
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 4.7e-58 228.8 253 48.6
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 6.1e-58 228.4 253 49.4
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 6.1e-58 228.4 253 48.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 6.1e-58 228.4 255 47.1
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 8.0e-58 228.0 253 47.0
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 8.0e-58 228.0 253 48.2
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.0e-57 227.6 253 49.4
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.4e-57 227.3 253 47.4
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.8e-57 226.9 253 47.4
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.8e-57 226.9 252 48.0
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 1.8e-57 226.9 253 46.6
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.8e-57 226.9 253 49.0
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.8e-57 226.9 253 48.2
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.3e-57 226.5 253 49.0
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.3e-57 226.5 253 49.0
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 2.3e-57 226.5 258 47.7
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 4.0e-57 225.7 253 49.0
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 4.0e-57 225.7 253 48.2
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.2e-57 225.3 253 47.0
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 5.2e-57 225.3 253 49.0
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 5.2e-57 225.3 254 47.6
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 5.2e-57 225.3 275 45.1
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 6.8e-57 224.9 253 47.0
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 6.8e-57 224.9 253 48.2
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 6.8e-57 224.9 253 48.2
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 6.8e-57 224.9 253 49.0
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 6.8e-57 224.9 253 47.4
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 8.9e-57 224.6 254 49.6
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 8.9e-57 224.6 253 47.8
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.5e-56 223.8 253 48.2
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.5e-56 223.8 253 47.8
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.5e-56 223.8 253 47.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 2.0e-56 223.4 253 47.0
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.0e-56 223.4 252 48.0
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 2.0e-56 223.4 253 48.6
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 4.4e-56 222.2 253 47.8
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.7e-56 221.9 255 48.2
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 9.8e-56 221.1 253 46.6
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.7e-55 220.3 242 46.3
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.7e-55 220.3 253 46.6
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 3.7e-55 219.2 278 44.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 4.9e-55 218.8 253 46.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.9e-55 218.8 253 46.6
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 6.4e-55 218.4 253 46.6
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 8.3e-55 218.0 253 46.6
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 8.3e-55 218.0 253 45.8
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 3.2e-54 216.1 253 45.5
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 5.4e-54 215.3 282 42.6
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 5.4e-54 215.3 253 45.1
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.2e-53 214.2 252 48.8
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.2e-53 214.2 252 46.0
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.2e-53 214.2 219 51.6
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.0e-53 213.4 253 44.7
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 7.8e-53 211.5 253 45.5
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 8.6e-52 208.0 273 45.1
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 8.6e-52 208.0 240 48.8
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 8.6e-52 208.0 239 46.0
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.1e-51 207.6 287 41.5
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.5e-51 206.5 301 41.9
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 4.7e-50 202.2 267 45.3
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.4e-49 200.7 253 49.8
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 5.2e-49 198.7 224 46.9
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.0e-48 196.8 224 48.7
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.6e-48 196.4 248 45.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 9.2e-46 188.0 254 41.3
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.6e-45 187.2 202 49.5
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.9e-43 180.3 225 44.0
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.1e-41 174.5 252 41.3
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 2.0e-40 170.2 224 42.9
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 4.4e-40 169.1 175 50.9
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.1e-38 162.5 175 50.3
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.6e-37 160.6 175 49.1
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 2.1e-37 160.2 175 50.3
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.3e-27 126.3 175 44.0
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 3.1e-25 119.8 248 32.7
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 5.4e-22 109.0 239 32.2
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.1e-21 107.1 133 42.9
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 7.8e-21 105.1 131 42.0
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.1e-18 97.1 92 54.3
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 3.3e-11 73.2 122 34.4


User provided reference genes

Program Settings