Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.8e-113 412.5 202 100.0
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 6.6e-79 297.7 202 69.3
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 1.8e-76 289.7 202 69.3
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 6.3e-74 281.2 202 64.9
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.4e-73 280.0 202 64.4
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 3.2e-73 278.9 202 64.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 5.4e-73 278.1 202 64.9
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.2e-72 276.9 202 65.8
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 4.5e-72 275.0 202 63.9
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 5.9e-72 274.6 202 64.9
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 7.8e-72 274.2 202 63.9
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 7.8e-72 274.2 202 65.3
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 7.8e-72 274.2 202 65.3
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 7.8e-72 274.2 202 64.9
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.0e-71 273.9 202 64.9
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.7e-71 273.1 202 62.9
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 1.7e-71 273.1 202 62.9
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.7e-71 273.1 202 64.4
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.7e-71 273.1 202 65.3
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 1.7e-71 273.1 202 64.4
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 62.9
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 62.4
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 62.4
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 62.4
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 62.4
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 62.9
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 63.4
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 2.3e-71 272.7 202 65.3
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 2.3e-71 272.7 201 65.7
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 2.9e-71 272.3 202 63.9
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.0e-71 271.6 202 63.4
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.0e-71 271.6 202 63.4
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 5.0e-71 271.6 202 63.4
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 6.6e-71 271.2 202 63.9
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 6.6e-71 271.2 202 62.9
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 8.6e-71 270.8 202 64.4
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.1e-70 270.4 202 63.9
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 1.1e-70 270.4 202 63.9
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.1e-70 270.4 202 65.3
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.5e-70 270.0 204 64.7
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.5e-70 270.0 202 62.9
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.5e-70 270.0 202 62.9
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.5e-70 270.0 202 62.9
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 2.5e-70 269.2 202 64.9
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.5e-70 269.2 202 62.9
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.5e-70 269.2 202 62.9
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.5e-70 269.2 202 63.9
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 2.5e-70 269.2 202 63.9
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.5e-70 269.2 202 63.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 3.3e-70 268.9 202 62.4
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 4.3e-70 268.5 202 63.9
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 4.3e-70 268.5 202 62.9
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 4.3e-70 268.5 202 62.9
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 5.6e-70 268.1 202 62.9
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 5.6e-70 268.1 202 63.4
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 5.6e-70 268.1 202 63.4
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 7.3e-70 267.7 201 64.2
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 9.5e-70 267.3 202 63.4
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 9.5e-70 267.3 202 62.9
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 9.5e-70 267.3 202 62.9
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 9.5e-70 267.3 202 61.9
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 9.5e-70 267.3 202 63.4
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.2e-69 266.9 202 62.4
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.2e-69 266.9 202 64.9
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.6e-69 266.5 202 62.4
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.1e-69 266.2 202 62.9
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 2.1e-69 266.2 202 62.4
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 2.1e-69 266.2 202 62.9
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 2.1e-69 266.2 203 62.6
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 2.1e-69 266.2 204 62.7
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 2.1e-69 266.2 202 62.9
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 2.1e-69 266.2 202 63.4
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.8e-69 265.8 202 62.9
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 3.6e-69 265.4 201 61.7
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 3.6e-69 265.4 202 62.9
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.7e-69 265.0 204 61.8
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 4.7e-69 265.0 208 61.1
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 6.1e-69 264.6 202 62.9
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 8.0e-69 264.2 202 62.9
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 8.0e-69 264.2 202 62.9
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.0e-68 263.8 202 62.9
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.8e-68 263.1 202 61.9
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 2.3e-68 262.7 202 62.4
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 5.2e-68 261.5 203 61.6
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.2e-67 260.4 202 62.4
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.2e-67 260.4 202 61.4
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 2.0e-67 259.6 202 60.9
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 2.0e-67 259.6 202 60.9
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 5.8e-67 258.1 202 61.4
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 1.3e-66 256.9 194 63.9
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 2.2e-66 256.1 204 61.8
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 8.3e-66 254.2 189 62.4
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 8.3e-66 254.2 252 51.6
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.1e-65 253.8 204 60.8
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-65 253.1 204 60.8
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-65 253.1 204 60.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-65 253.1 204 60.8
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 5.4e-65 251.5 239 53.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 5.4e-65 251.5 224 55.8
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 5.0e-63 245.0 188 62.8
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 9.5e-62 240.7 202 58.9
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 4.0e-60 235.3 284 45.4
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.1e-54 217.2 202 53.5
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.9e-54 216.5 193 58.0
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.7e-48 196.1 212 50.5
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 7.8e-48 194.5 207 50.7
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.1e-46 190.7 148 60.8
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.6e-43 179.5 140 60.0
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 9.0e-28 127.9 152 43.4
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.7e-26 123.6 108 51.9
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 2.7e-24 116.3 118 42.4
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.7e-24 116.3 193 43.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 4.0e-20 102.4 58 72.4
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.3e-18 97.4 164 39.0
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 8.4e-18 94.7 79 64.6
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.6e-16 90.5 130 36.9
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 1.1e-14 84.3 79 57.0
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.1e-08 63.5 83 41.0


User provided reference genes

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