Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.8e-76 289.7 199 100.0
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 2.6e-27 126.3 164 70.1
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 2.2e-26 123.2 190 61.1
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 4.9e-26 122.1 188 61.2
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 6.6e-23 111.7 142 70.4
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 1.3e-18 97.4 146 66.4
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 4.9e-18 95.5 146 65.1
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 2.0e-16 90.1 146 63.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 5.9e-16 88.6 146 62.3
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 2.3e-15 86.7 141 64.5
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 2.3e-15 86.7 141 64.5
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 2.3e-15 86.7 146 61.6
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 2.3e-15 86.7 137 63.5
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 2.3e-15 86.7 146 63.0
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 3.0e-15 86.3 141 65.2
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 3.9e-15 85.9 141 64.5
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 3.9e-15 85.9 146 61.0
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 5.0e-15 85.5 143 59.4
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 6.6e-15 85.1 142 61.3
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 8.6e-15 84.7 130 67.7
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 8.6e-15 84.7 142 61.3
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 8.6e-15 84.7 126 69.8
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 8.6e-15 84.7 131 67.2
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 1.1e-14 84.3 124 70.2
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 1.1e-14 84.3 124 70.2
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 1.9e-14 83.6 124 69.4
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.9e-14 83.6 124 69.4
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.9e-14 83.6 124 69.4
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 3.3e-14 82.8 124 69.4
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 3.3e-14 82.8 146 61.6
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 5.6e-14 82.0 194 49.5
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 5.6e-14 82.0 137 64.2
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 5.6e-14 82.0 137 64.2
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 5.6e-14 82.0 116 73.3
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 5.6e-14 82.0 126 63.5
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 5.6e-14 82.0 131 65.6
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 5.6e-14 82.0 123 69.1
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 7.3e-14 81.6 128 68.0
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 7.3e-14 81.6 151 60.3
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 7.3e-14 81.6 170 52.9
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 9.5e-14 81.3 126 66.7
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 1.2e-13 80.9 123 69.1
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.6e-13 80.5 124 68.5
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 2.1e-13 80.1 123 66.7
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.8e-13 79.7 120 70.0
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 3.6e-13 79.3 127 66.1
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 3.6e-13 79.3 142 59.9
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 3.6e-13 79.3 142 59.9
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 3.6e-13 79.3 68 64.7
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 4.7e-13 79.0 149 59.1
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 4.7e-13 79.0 172 55.8
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 4.7e-13 79.0 124 67.7
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 4.7e-13 79.0 124 67.7
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 4.7e-13 79.0 137 66.4
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 4.7e-13 79.0 128 65.6
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 4.7e-13 79.0 148 58.8
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 6.2e-13 78.6 133 63.9
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 8.0e-13 78.2 173 54.3
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 8.0e-13 78.2 142 59.9
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 1.1e-12 77.8 130 63.1
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 1.1e-12 77.8 124 66.9
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.1e-12 77.8 146 58.9
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.4e-12 77.4 130 63.1
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.4e-12 77.4 139 61.2
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 1.4e-12 77.4 139 61.9
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.8e-12 77.0 142 59.9
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 1.8e-12 77.0 144 60.4
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.3e-12 76.6 120 68.3
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 2.3e-12 76.6 120 68.3
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 2.3e-12 76.6 146 58.2
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 4.0e-12 75.9 127 64.6
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 4.0e-12 75.9 123 65.0
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 5.2e-12 75.5 133 63.9
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 6.8e-12 75.1 88 69.3
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 6.8e-12 75.1 128 66.4
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 6.8e-12 75.1 124 66.1
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 8.9e-12 74.7 146 56.2
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 8.9e-12 74.7 142 59.2
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 8.9e-12 74.7 118 67.8
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 8.9e-12 74.7 145 57.9
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 1.5e-11 73.9 88 69.3
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 1.5e-11 73.9 146 60.3
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 2.0e-11 73.6 146 58.2
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 2.6e-11 73.2 142 59.2
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.6e-11 73.2 128 63.3
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 2.6e-11 73.2 145 56.6
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 3.4e-11 72.8 119 66.4
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 3.4e-11 72.8 116 67.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 3.4e-11 72.8 202 50.5
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 5.8e-11 72.0 64 64.1
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 5.8e-11 72.0 67 61.2
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 5.8e-11 72.0 88 68.2
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 7.5e-11 71.6 88 68.2
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 9.8e-11 71.2 119 65.5
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 9.8e-11 71.2 122 64.8
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 1.3e-10 70.9 116 68.1
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 1.3e-10 70.9 120 65.8
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.7e-10 70.5 119 66.4
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 6.4e-10 68.6 67 62.7
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 1.1e-09 67.8 128 63.3
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.4e-09 67.4 88 65.9
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.4e-09 67.4 119 63.0
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 7.0e-09 65.1 64 56.2
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 9.2e-09 64.7 121 38.0
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 7.8e-08 61.6 144 54.2
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 1.9e-06 57.0 67 50.7


User provided reference genes

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