Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 3.0e-262 907.9 440 100.0
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 5.7e-136 488.4 447 61.3
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 3.1e-73 280.0 227 67.0
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 8.2e-50 202.2 227 49.8
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.2e-45 188.3 226 46.0
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 3.0e-44 183.7 226 43.4
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 3.0e-44 183.7 226 43.4
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 5.1e-44 183.0 226 42.5
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 6.7e-44 182.6 226 43.4
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.5e-43 180.6 226 43.4
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 7.4e-43 179.1 226 42.5
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.3e-42 178.3 226 43.8
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 3.7e-42 176.8 226 42.5
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 4.8e-42 176.4 226 42.0
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 4.8e-42 176.4 227 41.0
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 4.8e-42 176.4 226 43.4
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 6.3e-42 176.0 226 41.6
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 1.1e-41 175.3 226 42.5
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.1e-41 175.3 225 42.2
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 1.1e-41 175.3 226 40.7
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 1.8e-41 174.5 226 41.2
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.4e-41 174.1 234 42.3
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.1e-41 173.7 226 42.0
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 4.1e-41 173.3 226 44.7
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 5.3e-41 172.9 227 41.4
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 6.9e-41 172.6 225 41.3
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 9.0e-41 172.2 227 41.4
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 9.0e-41 172.2 226 42.9
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.2e-40 171.8 228 41.7
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.2e-40 171.8 225 40.4
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.2e-40 171.8 224 44.2
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 1.2e-40 171.8 226 42.5
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 1.2e-40 171.8 226 42.0
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 1.5e-40 171.4 225 40.4
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.5e-40 171.4 226 42.0
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 1.5e-40 171.4 226 40.7
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.0e-40 171.0 226 41.6
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.0e-40 171.0 226 40.7
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 2.6e-40 170.6 226 40.7
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 2.6e-40 170.6 226 43.4
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 2.6e-40 170.6 226 41.6
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 2.6e-40 170.6 226 39.8
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 4.5e-40 169.9 226 40.3
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 5.9e-40 169.5 224 40.6
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 5.9e-40 169.5 226 41.6
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.9e-40 169.5 226 41.6
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 5.9e-40 169.5 226 41.2
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 5.9e-40 169.5 226 40.3
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 7.7e-40 169.1 226 42.5
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 7.7e-40 169.1 226 41.2
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 1.3e-39 168.3 226 42.9
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.3e-39 168.3 227 41.0
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.3e-39 168.3 226 40.7
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.7e-39 167.9 226 41.2
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.7e-39 167.9 226 41.2
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 2.2e-39 167.5 226 39.8
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 2.2e-39 167.5 226 38.9
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 2.9e-39 167.2 236 39.4
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 2.9e-39 167.2 226 38.5
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 3.8e-39 166.8 229 40.6
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 3.8e-39 166.8 226 39.8
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 3.8e-39 166.8 226 39.8
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 5.0e-39 166.4 245 39.6
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 6.5e-39 166.0 224 39.7
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.4e-38 164.9 225 38.7
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.4e-38 164.9 226 38.9
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.4e-38 164.9 226 37.6
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.9e-38 164.5 225 39.1
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.5e-38 164.1 226 40.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 2.5e-38 164.1 226 40.3
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.5e-38 164.1 226 38.9
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 3.2e-38 163.7 226 39.8
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 5.5e-38 162.9 226 39.4
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 7.2e-38 162.5 226 40.3
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 9.4e-38 162.2 226 40.3
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 9.4e-38 162.2 226 40.7
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 9.4e-38 162.2 226 37.6
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.6e-37 161.4 226 39.4
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 1.6e-37 161.4 226 39.4
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 1.6e-37 161.4 226 39.4
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 2.7e-37 160.6 231 36.8
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 2.7e-37 160.6 225 40.0
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 3.6e-37 160.2 231 36.8
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 3.6e-37 160.2 224 39.3
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 4.6e-37 159.8 226 38.5
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 6.1e-37 159.5 228 39.5
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 7.9e-37 159.1 226 39.8
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.0e-36 158.7 225 39.6
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 1.4e-36 158.3 226 38.9
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 2.3e-36 157.5 226 38.9
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 3.0e-36 157.1 226 39.4
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 3.0e-36 157.1 226 38.5
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 3.0e-36 157.1 225 39.6
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 8.8e-36 155.6 226 38.1
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 1.5e-35 154.8 253 36.8
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 3.3e-35 153.7 226 38.9
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 3.3e-35 153.7 226 36.7
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 3.7e-34 150.2 226 38.9
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 6.3e-34 149.4 226 38.5
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 8.2e-34 149.1 242 37.2
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 3.4e-32 143.7 226 39.8
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 6.5e-31 139.4 190 38.4
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 2.3e-28 131.0 126 50.0
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 5.7e-27 126.3 185 39.5
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 3.1e-25 120.6 185 37.8
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.3e-23 115.2 248 35.1
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 4.7e-21 106.7 224 33.9
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 1.6e-16 91.7 213 32.9
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 1.3e-15 88.6 124 40.3
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 1.6e-13 81.6 73 49.3
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 1.6e-13 81.6 73 49.3
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 1.6e-13 81.6 73 49.3
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 1.6e-13 81.6 73 49.3
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 3.0e-12 77.4 223 30.9
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 5.2e-12 76.6 63 60.3
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 1.8e-09 68.2 63 49.2
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.4e-09 67.8 222 25.2


User provided reference genes

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