Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 1.2e-151 540.0 330 100.0
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 5.7e-72 275.4 328 51.5
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.8e-70 270.4 327 52.3
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.5e-69 267.3 316 59.8
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 2.0e-69 266.9 327 53.2
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 3.5e-69 266.2 311 55.9
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 1.9e-67 260.4 326 59.2
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 2.7e-66 256.5 332 50.6
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 8.0e-66 255.0 315 52.1
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 8.0e-66 255.0 327 46.2
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 1.0e-65 254.6 327 53.2
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.4e-65 254.2 324 53.1
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 1.4e-65 254.2 324 50.9
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 2.3e-65 253.4 326 53.1
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 3.0e-65 253.1 331 58.6
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 3.9e-65 252.7 325 57.8
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 8.8e-65 251.5 321 54.5
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 8.8e-65 251.5 312 58.0
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.1e-64 251.1 338 51.5
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 3.3e-64 249.6 314 53.2
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 4.4e-64 249.2 322 51.9
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 5.7e-64 248.8 324 55.9
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 5.7e-64 248.8 327 54.4
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 7.4e-64 248.4 324 57.7
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.7e-63 247.3 327 54.1
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 2.2e-63 246.9 330 52.4
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.8e-63 246.5 324 55.2
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 2.8e-63 246.5 327 50.8
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 3.7e-63 246.1 327 51.1
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 6.3e-63 245.4 329 52.6
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 6.3e-63 245.4 317 55.2
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 8.2e-63 245.0 356 46.3
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 8.2e-63 245.0 328 52.7
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 8.2e-63 245.0 322 50.6
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 8.2e-63 245.0 335 50.4
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.1e-62 244.6 330 51.2
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.1e-62 244.6 316 60.1
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 1.4e-62 244.2 338 56.2
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 3.1e-62 243.0 327 45.6
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.1e-62 242.7 320 51.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 4.1e-62 242.7 326 52.1
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 5.3e-62 242.3 328 51.8
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 5.3e-62 242.3 314 51.3
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 7.0e-62 241.9 320 51.9
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.2e-61 241.1 320 51.2
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 1.2e-61 241.1 351 46.2
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 1.6e-61 240.7 327 56.0
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 2.6e-61 240.0 318 52.5
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 2.6e-61 240.0 329 51.7
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 4.5e-61 239.2 319 52.7
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 4.5e-61 239.2 318 52.2
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 4.5e-61 239.2 320 51.6
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 7.7e-61 238.4 352 45.7
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 7.7e-61 238.4 333 51.1
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.0e-60 238.0 323 52.3
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 1.0e-60 238.0 328 52.1
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.3e-60 237.7 327 51.4
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 1.7e-60 237.3 333 56.5
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 1.7e-60 237.3 333 56.5
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.7e-60 237.3 328 52.1
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.2e-60 236.9 325 50.8
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 2.2e-60 236.9 324 50.9
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 2.2e-60 236.9 320 50.6
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 2.9e-60 236.5 323 51.7
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 2.9e-60 236.5 323 51.1
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 2.9e-60 236.5 325 52.0
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 3.8e-60 236.1 323 57.6
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 3.8e-60 236.1 323 57.6
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 3.8e-60 236.1 327 51.7
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 3.8e-60 236.1 317 50.8
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 5.0e-60 235.7 330 55.5
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 6.5e-60 235.3 326 56.7
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 6.5e-60 235.3 318 55.3
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.1e-59 234.6 330 49.7
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.5e-59 234.2 323 50.8
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.5e-59 234.2 327 49.5
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 1.5e-59 234.2 324 49.7
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 2.5e-59 233.4 323 54.5
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 7.2e-59 231.9 330 47.3
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.7e-58 229.9 340 39.1
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 3.6e-58 229.6 323 56.7
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 6.1e-58 228.8 329 48.9
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 8.0e-58 228.4 323 46.7
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.4e-57 227.6 320 55.9
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.8e-57 227.3 323 49.5
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 2.3e-57 226.9 330 47.9
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 8.8e-57 224.9 335 50.1
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 1.5e-56 224.2 326 46.3
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.0e-56 223.8 333 43.2
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.4e-56 223.0 321 49.5
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 4.4e-56 222.6 321 49.8
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.2e-55 220.3 324 55.6
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 2.2e-55 220.3 313 51.1
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.4e-54 217.6 275 55.3
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 1.2e-53 214.5 328 51.8
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.5e-53 212.6 326 47.9
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 3.0e-49 199.9 317 51.1
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 2.0e-48 197.2 278 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 4.9e-47 192.6 214 72.0
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 1.3e-31 141.4 342 40.9
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 1.1e-30 138.3 140 47.9
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 2.3e-28 130.6 258 32.2
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.5e-27 127.1 163 38.0
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 2.5e-27 127.1 213 34.3
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.3e-27 126.3 163 42.9
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 5.6e-27 125.9 165 38.8
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 9.5e-27 125.2 170 49.4
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 1.6e-26 124.4 208 44.7
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 1.6e-26 124.4 165 37.6
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.8e-26 123.6 167 46.7
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.4e-25 121.3 164 39.6
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.3e-25 120.6 110 51.8
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.5e-24 117.9 110 53.6
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.0e-24 117.5 164 37.2
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.9e-23 112.8 159 37.1
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 6.4e-23 112.5 167 38.3
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.1e-22 111.7 210 32.9
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.1e-22 111.7 79 67.1
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 7.8e-21 105.5 82 61.0
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-20 104.4 213 31.5
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 1.2e-18 98.2 108 46.3
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 3.1e-17 93.6 69 63.8
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.2e-16 91.7 81 53.1
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 2.0e-16 90.9 65 64.6
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 3.0e-12 77.0 117 35.0
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 2.5e-11 73.9 260 38.5
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 5.8e-08 62.8 54 53.7


User provided reference genes

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