Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 1.4e-113 412.9 196 100.0
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 3.9e-28 129.0 162 43.8
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 9.0e-25 117.9 177 45.2
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 3.4e-24 115.9 130 49.2
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 1.6e-21 107.1 153 42.5
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 4.6e-21 105.5 163 40.5
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 6.0e-21 105.1 131 45.0
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.3e-20 104.0 131 43.5
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.8e-20 103.6 153 41.8
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.8e-20 103.6 153 41.8
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.8e-20 103.6 153 41.8
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 1.8e-20 103.6 153 41.8
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 3.0e-20 102.8 155 39.4
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 3.9e-20 102.4 133 43.6
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 3.9e-20 102.4 131 41.2
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 5.1e-20 102.1 167 38.3
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 6.7e-20 101.7 153 41.2
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 6.7e-20 101.7 150 40.0
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 8.7e-20 101.3 124 43.5
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 1.1e-19 100.9 172 36.6
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 1.5e-19 100.5 168 35.7
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.5e-19 99.8 133 41.4
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 3.3e-19 99.4 131 44.3
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 3.3e-19 99.4 133 42.9
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 5.7e-19 98.6 131 42.0
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 9.7e-19 97.8 131 44.3
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 9.7e-19 97.8 133 42.1
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 9.7e-19 97.8 133 41.4
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 9.7e-19 97.8 136 41.9
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 1.3e-18 97.4 133 40.6
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.6e-18 97.1 133 40.6
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.6e-18 97.1 158 38.0
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 2.2e-18 96.7 131 41.2
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.2e-18 96.7 133 41.4
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 2.2e-18 96.7 131 42.0
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 3.7e-18 95.9 131 42.0
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 3.7e-18 95.9 133 42.9
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 4.8e-18 95.5 131 42.0
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 4.8e-18 95.5 131 42.7
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 4.8e-18 95.5 131 42.0
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 6.3e-18 95.1 131 42.0
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 6.3e-18 95.1 131 42.0
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 6.3e-18 95.1 131 42.7
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 8.2e-18 94.7 133 40.6
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 8.2e-18 94.7 133 40.6
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.1e-17 94.4 133 39.8
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 1.4e-17 94.0 131 41.2
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.4e-17 94.0 156 37.2
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 1.8e-17 93.6 131 40.5
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 1.8e-17 93.6 131 41.2
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 3.1e-17 92.8 131 39.7
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 4.1e-17 92.4 133 39.8
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 4.1e-17 92.4 133 39.8
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 5.3e-17 92.0 131 39.7
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 5.3e-17 92.0 154 36.4
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 5.3e-17 92.0 156 37.8
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 6.9e-17 91.7 131 40.5
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 6.9e-17 91.7 133 39.1
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 9.0e-17 91.3 133 39.1
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 1.2e-16 90.9 133 39.8
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 1.5e-16 90.5 131 40.5
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 1.5e-16 90.5 131 40.5
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.0e-16 90.1 131 40.5
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.0e-16 90.1 131 40.5
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 2.6e-16 89.7 131 39.7
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 3.4e-16 89.4 131 39.7
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 4.5e-16 89.0 131 38.9
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 4.5e-16 89.0 131 41.2
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 5.9e-16 88.6 131 38.9
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 5.9e-16 88.6 131 39.7
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 7.7e-16 88.2 109 43.1
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 7.7e-16 88.2 131 39.7
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 7.7e-16 88.2 158 36.1
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 1.3e-15 87.4 131 42.0
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 1.7e-15 87.0 130 40.8
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 3.8e-15 85.9 131 38.2
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 3.8e-15 85.9 133 36.8
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 3.8e-15 85.9 133 36.8
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 5.0e-15 85.5 131 38.2
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 5.0e-15 85.5 131 38.2
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 5.0e-15 85.5 131 38.2
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 8.5e-15 84.7 131 39.7
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 1.1e-14 84.3 132 40.2
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 1.1e-14 84.3 131 38.9
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 2.5e-14 83.2 131 38.9
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 7.2e-14 81.6 131 38.9
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.2e-13 80.9 131 37.4
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.7e-13 79.7 89 48.3
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 7.9e-13 78.2 131 36.6
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 1.8e-12 77.0 105 40.0
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.4e-11 71.6 69 49.3
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.4e-11 71.6 69 49.3
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 4.1e-09 65.9 172 32.0
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 5.3e-09 65.5 69 44.9
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 2.6e-08 63.2 93 37.6
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 7.2e-06 55.1 99 39.4


User provided reference genes

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