Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 6.1e-115 417.5 216 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.3e-32 144.1 162 50.0
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 7.9e-30 134.8 163 47.2
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 2.3e-21 106.7 166 40.4
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 5.6e-20 102.1 126 49.2
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 7.4e-20 101.7 166 37.3
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 9.6e-20 101.3 167 39.5
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 9.6e-20 101.3 164 40.2
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 1.3e-19 100.9 167 40.7
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 3.7e-19 99.4 163 41.1
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 4.8e-19 99.0 173 38.2
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 1.4e-18 97.4 164 42.1
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.8e-18 97.1 164 40.2
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.8e-18 97.1 174 37.4
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.8e-18 97.1 197 34.5
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 1.8e-18 97.1 162 37.7
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 2.4e-18 96.7 164 41.5
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 2.4e-18 96.7 164 41.5
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 2.4e-18 96.7 164 39.6
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 4.0e-18 95.9 164 37.8
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 4.0e-18 95.9 171 39.2
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.3e-18 95.5 164 39.6
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.3e-18 95.5 172 37.8
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.3e-18 95.5 172 37.8
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.3e-18 95.5 172 38.4
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 5.3e-18 95.5 166 39.2
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 6.9e-18 95.1 164 40.9
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 6.9e-18 95.1 164 40.9
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 6.9e-18 95.1 162 35.2
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 6.9e-18 95.1 162 35.2
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 9.0e-18 94.7 172 37.2
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.0e-18 94.7 172 37.2
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.0e-18 94.7 172 37.2
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.0e-18 94.7 172 37.2
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 9.0e-18 94.7 162 35.2
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.2e-17 94.4 164 39.0
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.2e-17 94.4 164 39.6
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.2e-17 94.4 166 39.2
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.2e-17 94.4 193 37.8
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 1.5e-17 94.0 166 39.2
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.5e-17 94.0 166 37.3
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 1.5e-17 94.0 166 38.6
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 2.0e-17 93.6 162 38.3
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.0e-17 93.6 170 40.6
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.6e-17 93.2 165 38.2
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.6e-17 93.2 165 36.4
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 2.6e-17 93.2 173 37.0
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 5.8e-17 92.0 165 37.0
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 5.8e-17 92.0 165 37.6
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 7.6e-17 91.7 169 36.7
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 1.0e-16 91.3 168 38.1
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 1.0e-16 91.3 170 36.5
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 1.0e-16 91.3 169 37.3
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.0e-16 91.3 173 37.0
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 1.0e-16 91.3 173 37.0
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.3e-16 90.9 164 36.6
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 1.7e-16 90.5 164 35.4
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 2.2e-16 90.1 164 39.0
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 2.2e-16 90.1 162 34.6
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.9e-16 89.7 168 39.9
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 3.8e-16 89.4 167 37.1
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 3.8e-16 89.4 164 37.2
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 4.9e-16 89.0 186 36.0
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 4.9e-16 89.0 164 38.4
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 4.9e-16 89.0 166 39.8
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 4.9e-16 89.0 173 35.8
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 4.9e-16 89.0 165 38.2
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 6.5e-16 88.6 164 38.4
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 6.5e-16 88.6 162 37.7
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 6.5e-16 88.6 168 35.7
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 6.5e-16 88.6 165 38.2
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 8.4e-16 88.2 164 36.0
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 8.4e-16 88.2 168 35.7
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.1e-15 87.8 171 37.4
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.1e-15 87.8 164 34.8
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.4e-15 87.4 164 34.8
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 1.4e-15 87.4 166 40.4
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 1.9e-15 87.0 175 34.9
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.5e-15 86.7 169 37.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.5e-15 86.7 169 37.3
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 3.2e-15 86.3 166 33.7
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.2e-15 86.3 164 33.5
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 3.2e-15 86.3 167 35.9
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 4.2e-15 85.9 147 37.4
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 7.1e-15 85.1 162 35.2
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.2e-14 84.3 164 32.9
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.6e-14 84.0 163 33.7
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 1.6e-14 84.0 165 37.6
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 2.1e-14 83.6 162 35.8
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 2.1e-14 83.6 162 37.7
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 3.5e-14 82.8 164 33.5
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 4.6e-14 82.4 156 32.7
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 4.6e-14 82.4 163 36.2
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.6e-14 82.4 192 33.9
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 6.0e-14 82.0 164 36.6
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 7.9e-14 81.6 166 35.5
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 7.9e-14 81.6 164 32.9
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.3e-13 80.9 164 32.9
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 1.3e-13 80.9 164 32.9
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 1.3e-13 80.9 164 32.9
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 1.3e-13 80.9 164 32.9
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.3e-13 80.9 164 32.9
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 1.8e-13 80.5 164 37.2
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 2.3e-13 80.1 168 35.7
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 2.3e-13 80.1 179 35.2
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 2.3e-13 80.1 127 41.7
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 5.1e-13 79.0 163 36.2
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 6.7e-13 78.6 183 30.6
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 6.7e-13 78.6 163 38.0
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 1.1e-12 77.8 162 35.2
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 1.9e-12 77.0 139 39.6
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 3.3e-12 76.3 131 38.9
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 3.3e-12 76.3 178 33.1
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 9.6e-12 74.7 178 33.1
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.3e-11 74.3 178 34.3
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.6e-11 73.9 166 33.7
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 2.1e-11 73.6 162 34.6
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 8.2e-11 71.6 166 34.9
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 9.0e-10 68.2 167 34.7
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 1.3e-08 64.3 129 34.9
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 1.7e-08 63.9 149 35.6
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 5.0e-08 62.4 136 34.6


User provided reference genes

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