Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 0.0e+00 1327.0 678 100.0
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 2.7e-121 440.3 750 37.7
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 2.1e-113 414.1 720 36.2
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 6.8e-112 409.1 709 38.4
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 2.0e-111 407.5 765 36.5
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 4.4e-111 406.4 707 36.9
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 9.8e-111 405.2 722 36.7
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 8.3e-110 402.1 713 35.9
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 3.1e-109 400.2 718 35.2
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 5.4e-109 399.4 699 37.6
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 2.0e-108 397.5 718 36.2
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 3.5e-108 396.7 707 36.5
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 3.5e-108 396.7 704 35.8
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 5.9e-108 396.0 714 36.7
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 2.3e-107 394.0 700 35.7
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 3.8e-107 393.3 704 36.4
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 6.6e-107 392.5 720 36.0
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.1e-106 391.7 711 36.3
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 9.5e-106 388.7 703 36.7
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 1.2e-105 388.3 698 37.5
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 1.6e-105 387.9 719 35.3
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.1e-105 387.5 714 37.1
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 2.1e-105 387.5 725 36.1
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 2.1e-105 387.5 720 35.1
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 2.1e-105 387.5 705 36.2
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 2.8e-105 387.1 731 37.6
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 3.6e-105 386.7 667 37.8
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 3.6e-105 386.7 725 36.1
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 4.7e-105 386.3 695 36.4
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 6.1e-105 386.0 724 36.3
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 1.0e-104 385.2 722 36.6
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 1.8e-104 384.4 722 36.1
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 2.3e-104 384.0 724 36.2
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 3.0e-104 383.6 722 36.4
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 4.0e-104 383.3 730 36.0
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 5.2e-104 382.9 696 36.9
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 5.2e-104 382.9 720 36.1
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 5.2e-104 382.9 705 35.9
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 8.9e-104 382.1 706 36.0
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 8.9e-104 382.1 700 37.0
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 8.9e-104 382.1 718 35.4
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 1.5e-103 381.3 725 35.6
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 1.5e-103 381.3 717 35.6
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 2.6e-103 380.6 717 34.9
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.6e-103 380.6 725 35.4
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 4.4e-103 379.8 699 36.8
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 5.7e-103 379.4 719 34.9
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 9.8e-103 378.6 722 35.0
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 2.9e-102 377.1 717 36.5
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 8.3e-102 375.6 710 36.5
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 1.1e-101 375.2 690 35.4
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 1.4e-101 374.8 697 34.6
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 2.4e-101 374.0 709 35.8
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 4.1e-101 373.2 716 36.0
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 4.1e-101 373.2 733 36.0
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 5.4e-101 372.9 706 36.5
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 7.0e-101 372.5 704 35.2
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.2e-100 371.7 727 34.5
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 2.0e-100 370.9 701 35.2
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.7e-100 370.5 692 36.3
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 5.9e-100 369.4 699 35.6
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 7.8e-100 369.0 712 36.4
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 7.8e-100 369.0 699 35.6
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 1.0e-99 368.6 699 34.8
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 1.0e-99 368.6 712 34.6
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.7e-99 367.9 678 36.3
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 2.3e-99 367.5 723 34.4
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 5.0e-99 366.3 693 35.2
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 1.1e-98 365.2 718 34.4
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 1.1e-98 365.2 715 34.8
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 3.3e-98 363.6 711 35.3
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 3.3e-98 363.6 713 35.2
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 3.3e-98 363.6 694 35.6
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 3.3e-98 363.6 761 34.7
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.3e-98 363.6 694 36.5
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 4.3e-98 363.2 703 35.6
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 7.3e-98 362.5 727 34.9
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 1.2e-97 361.7 706 35.0
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 1.6e-97 361.3 722 33.8
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 3.6e-97 360.1 716 35.8
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 1.1e-96 358.6 735 35.1
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 2.3e-96 357.5 628 35.8
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.3e-96 357.5 761 33.8
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 2.3e-96 357.5 697 34.9
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 8.9e-96 355.5 763 33.2
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 3.4e-95 353.6 735 33.9
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.7e-94 350.1 754 33.3
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 1.4e-93 348.2 708 34.5
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 5.4e-93 346.3 766 33.2
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 7.0e-93 345.9 630 35.9
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 2.7e-92 344.0 610 36.2
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 1.3e-91 341.7 712 34.7
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 2.3e-91 340.9 720 34.0
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 9.5e-90 335.5 611 37.0
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 9.5e-90 335.5 655 35.4
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 1.1e-88 332.0 482 40.9
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 1.4e-88 331.6 664 34.5
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 8.9e-88 328.9 727 32.5
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 8.9e-88 328.9 688 33.6
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 2.0e-87 327.8 699 34.5
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 4.4e-87 326.6 615 35.8
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.7e-86 324.7 594 36.5
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.9e-86 323.9 774 30.6
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 8.3e-86 322.4 481 40.3
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.9e-85 321.2 701 33.5
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 2.1e-84 317.8 646 34.4
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 5.1e-83 313.2 645 33.2
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 7.3e-82 309.3 600 35.5
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.1e-77 295.4 603 35.3
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 4.0e-72 276.9 405 39.3
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 7.3e-66 256.1 499 33.3
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 2.4e-64 251.1 416 36.8
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 2.8e-57 227.6 314 41.7
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 1.1e-56 225.7 493 34.5
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 1.9e-53 214.9 697 30.4
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.8e-51 208.4 461 32.5
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 9.0e-48 196.1 318 36.8
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 4.5e-47 193.7 623 27.8
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 5.9e-39 166.8 495 30.7
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.5e-34 152.1 283 37.5
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.3e-33 149.1 222 39.6
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 1.5e-26 125.6 266 32.0
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 2.6e-26 124.8 284 34.5
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 4.1e-16 90.9 160 32.5
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.1e-13 82.8 81 50.6
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 4.2e-13 80.9 242 27.7
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 3.0e-11 74.7 120 33.3
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 4.8e-09 67.4 72 45.8
Cre03.g201664 Chlamydomonas reinhardtii HOM05D005666 ORTHO05D143906 2.4e-08 65.1 594 21.9
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 5.0e-06 57.4 122 31.1


User provided reference genes

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