Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0184 Selaginella moellendorffii HOM05D001026 ORTHO05D005232 0.0e+00 1598.2 796 100.0
Mapoly0104s0038 Marchantia polymorpha HOM05D001026 ORTHO05D005232 5.5e-254 881.3 892 52.5
AagrBONN_evm.TU.Sc2ySwM_228.1520 Anthoceros agrestis HOM05D001026 ORTHO05D005232 1.2e-248 863.6 939 50.7
SMO356G0157 Selaginella moellendorffii HOM05D001026 ORTHO05D005232 1.1e-243 847.0 856 52.3
Pp3c2_15510 Physcomitrium patens HOM05D001026 ORTHO05D005232 3.1e-241 839.0 859 52.9
Pp3c1_27170 Physcomitrium patens HOM05D001026 ORTHO05D005232 2.0e-240 836.3 847 52.4
Duzib041G0801 Durio zibethinus HOM05D001026 ORTHO05D005232 5.3e-225 785.0 854 48.6
Cc10_g06660 Coffea canephora HOM05D001026 ORTHO05D005232 1.0e-223 780.8 928 44.4
Aqoxy6G00082 Aquilegia oxysepala HOM05D001026 ORTHO05D005232 1.3e-223 780.4 916 45.4
TAR381G1087 Trochodendron aralioides HOM05D001026 ORTHO05D005232 2.2e-223 779.6 887 46.1
GSVIVG01009085001 Vitis vinifera HOM05D001026 ORTHO05D005232 3.8e-223 778.9 846 48.5
Migut.C00225 Erythranthe guttata HOM05D001026 ORTHO05D005232 3.2e-222 775.8 861 47.5
CAN.G1173.1 Capsicum annuum HOM05D001026 ORTHO05D005232 1.2e-221 773.9 866 46.7
Manes.18G063378 Manihot esculenta HOM05D001026 ORTHO05D005232 1.2e-221 773.9 864 46.5
ClCG11G014330 Citrullus lanatus HOM05D001026 ORTHO05D005232 1.6e-221 773.5 892 46.2
Nn7g37838 Nelumbo nucifera HOM05D001026 ORTHO05D005232 6.1e-221 771.5 892 45.4
Medtr3g080120 Medicago truncatula HOM05D001026 ORTHO05D005232 1.4e-220 770.4 881 46.0
Cfa017894 Carpinus fangiana HOM05D001026 ORTHO05D005232 1.8e-220 770.0 876 45.9
Eucgr.B00041 Eucalyptus grandis HOM05D001026 ORTHO05D005232 5.2e-220 768.5 881 45.3
SalBow7G3028 Salvia bowleyana HOM05D001026 ORTHO05D005232 5.2e-220 768.5 849 47.9
CsaV3_3G047720 Cucumis sativus L. HOM05D001026 ORTHO05D005232 6.7e-220 768.1 867 46.9
Gohir.A03G045800 Gossypium hirsutum HOM05D001026 ORTHO05D005232 6.7e-220 768.1 879 46.5
Gohir.D03G121400 Gossypium hirsutum HOM05D001026 ORTHO05D005232 8.8e-220 767.7 879 46.3
Oeu029742.2 Olea europaea HOM05D001026 ORTHO05D005232 8.8e-220 767.7 862 46.3
Solyc04g074720.3 Solanum lycopersicum HOM05D001026 ORTHO05D005232 2.0e-219 766.5 869 46.5
Sopen04g029690 Solanum pennellii HOM05D001026 ORTHO05D005232 2.0e-219 766.5 869 46.5
Gorai.003G128400 Gossypium raimondii HOM05D001026 ORTHO05D005232 2.6e-219 766.1 879 46.2
Prupe.1G523400 Prunus persica HOM05D001026 ORTHO05D005232 2.6e-219 766.1 877 46.8
QL02p002343 Quercus lobata HOM05D001026 ORTHO05D005232 3.3e-219 765.8 879 45.8
MSTRG.24986 Avicennia marina HOM05D001026 ORTHO05D005232 4.4e-219 765.4 908 45.9
Manes.02G148900 Manihot esculenta HOM05D001026 ORTHO05D005232 4.4e-219 765.4 887 45.9
CiPaw.15G045700 Carya illinoinensis HOM05D001026 ORTHO05D005232 5.7e-219 765.0 886 45.4
MD08G1188800 Malus domestica HOM05D001026 ORTHO05D005232 1.3e-218 763.8 876 46.0
Ca_16276_v3 Cicer arietinum L. HOM05D001026 ORTHO05D005232 3.7e-218 762.3 868 46.2
TPR.G34506 Trifolium pratense HOM05D001026 ORTHO05D005232 3.7e-218 762.3 877 46.2
Atru.chr13.1116 Acer truncatum HOM05D001026 ORTHO05D005232 4.8e-218 761.9 887 44.9
Hma1.2p1_0593F.1_g185750 Hydrangea macrophylla HOM05D001026 ORTHO05D005232 4.8e-218 761.9 875 45.8
Sed0011558 Sechium edule HOM05D001026 ORTHO05D005232 4.8e-218 761.9 893 45.6
Sabra02G0079000 Salix brachista HOM05D001026 ORTHO05D005232 6.3e-218 761.5 885 45.1
CANSAT64G2709 Cannabis sativa HOM05D001026 ORTHO05D005232 8.2e-218 761.1 848 46.7
Ciclev10000130m.g Citrus clementina HOM05D001026 ORTHO05D005232 1.4e-217 760.4 901 44.7
RcHm_v2.0_Chr7g0238491 Rosa chinensis HOM05D001026 ORTHO05D005232 1.4e-217 760.4 884 45.9
Lj6g0009212 Lotus japonicus HOM05D001026 ORTHO05D005232 3.1e-217 759.2 883 45.6
FvH4_5g36450 Fragaria vesca HOM05D001026 ORTHO05D005232 5.3e-217 758.4 877 45.7
Lsat_1_v5_gn_9_73921 Lactuca sativa HOM05D001026 ORTHO05D005232 7.0e-217 758.1 794 48.5
arahy.Tifrunner.gnm1.ann1.SJ0MJA Arachis hypogaea HOM05D001026 ORTHO05D005232 9.1e-217 757.7 865 46.1
COL.COLO4_12005 Corchorus olitorius HOM05D001026 ORTHO05D005232 9.1e-217 757.7 905 46.2
Thecc.08G101700 Theobroma cacao HOM05D001026 ORTHO05D005232 9.1e-217 757.7 882 46.1
Potri.002G100800 Populus trichocarpa HOM05D001026 ORTHO05D005232 1.6e-216 756.9 888 45.0
Psat5g110840 Pisum sativum HOM05D001026 ORTHO05D005232 2.0e-216 756.5 927 43.8
arahy.Tifrunner.gnm1.ann1.H5V4Y1 Arachis hypogaea HOM05D001026 ORTHO05D005232 4.5e-216 755.4 865 46.0
Sed0018981 Sechium edule HOM05D001026 ORTHO05D005232 1.7e-215 753.4 900 45.3
TWI56G0493 Tripterygium wilfordii HOM05D001026 ORTHO05D005232 1.7e-215 753.4 873 46.3
Nitab4.5_0005108g0010 Nicotiana tabacum HOM05D001026 ORTHO05D005232 2.9e-215 752.7 870 45.7
PSO700G0312 Papaver somniferum HOM05D001026 ORTHO05D005232 2.9e-215 752.7 899 44.5
CBR_g5699 Chara braunii HOM05D001026 ORTHO05D005232 3.8e-215 752.3 977 45.4
SGA_v2.0_scaffold74G24568 Striga asiatica HOM05D001026 ORTHO05D005232 8.5e-215 751.1 902 45.6
Lalb_Chr18g0048141 Lupinus albus HOM05D001026 ORTHO05D005232 1.5e-214 750.4 879 45.3
Solyc12g057130.3 Solanum lycopersicum HOM05D001026 ORTHO05D005232 1.5e-214 750.4 877 46.2
PSO447G0261 Papaver somniferum HOM05D001026 ORTHO05D005232 1.9e-214 750.0 906 44.3
BcaB03g13886 Brassica carinata HOM05D001026 ORTHO05D005232 3.2e-214 749.2 873 44.4
MBI06_g22313_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D005232 1.6e-213 746.9 958 43.1
vmacro21290 Vaccinium macrocarpon HOM05D001026 ORTHO05D005232 2.1e-213 746.5 883 45.0
ECA232G4443 Erigeron canadensis HOM05D001026 ORTHO05D005232 3.6e-213 745.7 883 45.6
THA.LOC104816596 Tarenaya hassleriana HOM05D001026 ORTHO05D005232 4.7e-213 745.3 882 44.4
FAN18G1967 Fragaria x ananassa HOM05D001026 ORTHO05D005232 6.1e-213 745.0 906 44.5
Peaxi162Scf00030g02517 Petunia axillaris HOM05D001026 ORTHO05D005232 2.3e-212 743.0 963 43.2
CARHR286320 Cardamine hirsuta HOM05D001026 ORTHO05D005232 4.0e-212 742.3 891 43.9
Phvul.L003337 Phaseolus vulgaris HOM05D001026 ORTHO05D005232 4.0e-212 742.3 871 45.2
Zm00001eb288650 Zea mays HOM05D001026 ORTHO05D005232 4.0e-212 742.3 859 45.5
DCAR_009580 Daucus carota HOM05D001026 ORTHO05D005232 1.2e-211 740.7 854 44.7
C07p16280 Brassica napus HOM05D001026 ORTHO05D005232 1.5e-211 740.3 869 44.2
BolC7t42122H Brassica oleracea HOM05D001026 ORTHO05D005232 1.5e-211 740.3 869 44.2
FAN08G3634 Fragaria x ananassa HOM05D001026 ORTHO05D005232 1.5e-211 740.3 902 44.0
FAN13G1430 Fragaria x ananassa HOM05D001026 ORTHO05D005232 1.5e-211 740.3 895 44.4
ECA247G3686 Erigeron canadensis HOM05D001026 ORTHO05D005232 2.0e-211 740.0 832 46.0
FAN04G2218 Fragaria x ananassa HOM05D001026 ORTHO05D005232 2.6e-211 739.6 913 43.8
Aa31LG6G8880 Aethionema arabicum HOM05D001026 ORTHO05D005232 3.4e-211 739.2 861 43.9
BraA07t28862Z Brassica rapa HOM05D001026 ORTHO05D005232 3.4e-211 739.2 871 43.9
Carub.0001s3287 Capsella rubella HOM05D001026 ORTHO05D005232 3.4e-211 739.2 868 44.7
BcaC06g35430 Brassica carinata HOM05D001026 ORTHO05D005232 4.4e-211 738.8 869 44.2
HanXRQChr09g0248911 Helianthus annuus HOM05D001026 ORTHO05D005232 4.4e-211 738.8 820 46.7
Os01g0303200 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D005232 4.4e-211 738.8 832 46.4
ATR0684G075 Amborella trichopoda HOM05D001026 ORTHO05D005232 9.8e-211 737.6 845 46.9
Ah.05g169670 Amaranthus hybridus HOM05D001026 ORTHO05D005232 1.7e-210 736.9 881 45.3
Lsat_1_v5_gn_1_3061 Lactuca sativa HOM05D001026 ORTHO05D005232 2.2e-210 736.5 831 46.3
A07p10680 Brassica napus HOM05D001026 ORTHO05D005232 2.8e-210 736.1 869 43.8
Sc01g0000810 Simmondsia chinensis HOM05D001026 ORTHO05D005232 2.8e-210 736.1 883 44.5
Sp1g25380 Schrenkiella parvula HOM05D001026 ORTHO05D005232 3.7e-210 735.7 873 43.9
Rhsim06G0077700 Rhododendron simsii HOM05D001026 ORTHO05D005232 1.1e-209 734.2 887 44.4
Thhalv10006673m.g Eutrema salsugineum HOM05D001026 ORTHO05D005232 1.4e-209 733.8 873 43.9
HanXRQChr12g0379801 Helianthus annuus HOM05D001026 ORTHO05D005232 5.4e-209 731.9 789 47.1
AL1G49940 Arabidopsis lyrata HOM05D001026 ORTHO05D005232 1.2e-208 730.7 899 43.3
AT1G35220 Arabidopsis thaliana HOM05D001026 ORTHO05D005232 3.5e-208 729.2 873 44.0
Lalb_Chr17g0347341 Lupinus albus HOM05D001026 ORTHO05D005232 1.3e-207 727.2 888 44.7
LjContig00564g0017936 Lotus japonicus HOM05D001026 ORTHO05D005232 6.5e-207 724.9 895 43.6
VMungo0647G2280 Vigna mungo HOM05D001026 ORTHO05D005232 8.6e-207 724.5 902 42.5
Os05g0355133 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D005232 1.1e-206 724.2 861 44.4
Nitab4.5_0000786g0020 Nicotiana tabacum HOM05D001026 ORTHO05D005232 4.2e-206 722.2 866 45.4
Medtr5g085880 Medicago truncatula HOM05D001026 ORTHO05D005232 4.7e-205 718.8 938 42.4
Glyma.13G027300 Glycine max HOM05D001026 ORTHO05D005232 8.9e-204 714.5 839 44.6
Psat2g022120 Pisum sativum HOM05D001026 ORTHO05D005232 1.2e-203 714.1 890 43.1
VMungo0540G1065 Vigna mungo HOM05D001026 ORTHO05D005232 3.4e-203 712.6 946 41.5
Sopen12g029790 Solanum pennellii HOM05D001026 ORTHO05D005232 2.8e-202 709.5 834 45.8
HPP92_016948 Vanilla planifolia HOM05D001026 ORTHO05D005232 3.5e-200 702.6 881 43.9
EL10Ac1g01144 Beta vulgaris HOM05D001026 ORTHO05D005232 5.9e-200 701.8 876 43.8
TPR.G14449 Trifolium pratense HOM05D001026 ORTHO05D005232 4.4e-195 685.6 903 42.0
PGSC0003DMG400017755 Solanum tuberosum HOM05D001026 ORTHO05D005232 1.0e-191 674.5 877 43.3
MELO3C003550.2 Cucumis melo HOM05D001026 ORTHO05D005232 2.3e-191 673.3 965 40.2
Dinv07074 Davidia involucrata HOM05D001026 ORTHO05D005232 3.0e-191 672.9 808 44.8
AUR62018974 Chenopodium quinoa HOM05D001026 ORTHO05D005232 3.9e-191 672.5 881 43.2
Ca_06108_v3 Cicer arietinum L. HOM05D001026 ORTHO05D005232 9.5e-190 667.9 965 39.9
Lj4C96G17 Lonicera japonica HOM05D001026 ORTHO05D005232 1.1e-188 664.5 879 42.5
Gorai.010G037700 Gossypium raimondii HOM05D001026 ORTHO05D005232 2.3e-188 663.3 870 42.0
Zm00001eb130190 Zea mays HOM05D001026 ORTHO05D005232 3.1e-188 662.9 777 45.0
arahy.Tifrunner.gnm1.ann1.1274C3 Arachis hypogaea HOM05D001026 ORTHO05D005232 1.2e-187 661.0 1010 37.6
Hund16887 Selenicereus undatus HOM05D001026 ORTHO05D005232 1.4e-185 654.1 963 40.1
Phvul.008G211900 Phaseolus vulgaris HOM05D001026 ORTHO05D005232 1.2e-184 651.0 885 41.1
Glyma.02G270100 Glycine max HOM05D001026 ORTHO05D005232 1.3e-183 647.5 881 41.3
arahy.Tifrunner.gnm1.ann1.Z84UIM Arachis hypogaea HOM05D001026 ORTHO05D005232 1.9e-182 643.7 1043 36.3
Gohir.D06G034200 Gossypium hirsutum HOM05D001026 ORTHO05D005232 4.6e-176 622.5 775 43.6
CDE10G1069 Ceratophyllum demersum HOM05D001026 ORTHO05D005232 6.6e-175 618.6 876 41.4
AUR62027815 Chenopodium quinoa HOM05D001026 ORTHO05D005232 1.8e-172 610.5 865 41.4
unitig_46.g17923 Utricularia gibba HOM05D001026 ORTHO05D005232 8.9e-172 608.2 771 44.4
Actinidia30796 Actinidia chinensis HOM05D001026 ORTHO05D005232 9.2e-169 598.2 786 42.9
CSS0035277 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D005232 1.9e-150 537.3 786 39.9
Zm00001eb286080 Zea mays HOM05D001026 ORTHO05D005232 2.5e-150 537.0 717 42.7
Gohir.A06G033300 Gossypium hirsutum HOM05D001026 ORTHO05D005232 4.9e-146 522.7 718 41.5
Glyma.20G056600 Glycine max HOM05D001026 ORTHO05D005232 1.4e-129 468.0 398 55.8
MD15G1376700 Malus domestica HOM05D001026 ORTHO05D005232 1.8e-127 461.1 677 40.5
Dinv05858 Davidia involucrata HOM05D001026 ORTHO05D005232 7.9e-120 435.6 332 59.6
Manes.18G025208 Manihot esculenta HOM05D001026 ORTHO05D005232 4.5e-115 419.9 422 50.5
Hund26991 Selenicereus undatus HOM05D001026 ORTHO05D005232 6.5e-114 416.0 665 39.1
Psat0s5307g0040 Pisum sativum HOM05D001026 ORTHO05D005232 6.7e-103 379.4 415 49.2
Psat4g114320 Pisum sativum HOM05D001026 ORTHO05D005232 7.5e-102 375.9 385 50.6
SEGI_18178 Sequoiadendron giganteum HOM05D001026 ORTHO05D005232 1.6e-91 341.7 546 39.0
Cre10.g457150 Chlamydomonas reinhardtii HOM05D001026 ORTHO05D005232 6.6e-90 336.3 725 33.4
Haze_18258 Corylus avellana HOM05D001026 ORTHO05D005232 7.5e-86 322.8 564 36.2
Dinv05859 Davidia involucrata HOM05D001026 ORTHO05D005232 7.0e-84 316.2 505 37.0
Peaxi162Scf00571g00528 Petunia axillaris HOM05D001026 ORTHO05D005232 1.7e-82 311.6 531 36.9
Glyma.20G056500 Glycine max HOM05D001026 ORTHO05D005232 5.2e-79 300.1 515 35.7
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 9.5e-73 279.3 273 50.9
MD15G1376600 Malus domestica HOM05D001026 ORTHO05D005232 8.0e-72 276.2 205 56.6
SHI20583 Sapria himalayana HOM05D001026 ORTHO05D005232 6.8e-71 273.1 488 35.9
arahy.Tifrunner.gnm1.ann1.WH8Y2A Arachis hypogaea HOM05D001026 ORTHO05D005232 1.4e-68 265.4 247 55.1
Haze_18259 Corylus avellana HOM05D001026 ORTHO05D005232 1.2e-62 245.7 237 54.0
SHI20581 Sapria himalayana HOM05D001026 ORTHO05D005232 8.3e-61 239.6 238 50.0
Haze_18261 Corylus avellana HOM05D001026 ORTHO05D005232 1.8e-55 221.9 152 60.5
Hund26990 Selenicereus undatus HOM05D001026 ORTHO05D005232 1.5e-54 218.8 150 61.3
Psat1g107360 Pisum sativum HOM05D001026 ORTHO05D005232 3.5e-51 207.6 212 51.9
PRCOL_00002948 Prasinoderma coloniale HOM05D001026 ORTHO05D005232 1.8e-47 195.3 719 27.8
Psat0s2339g0080 Pisum sativum HOM05D001026 ORTHO05D005232 5.1e-34 150.6 169 48.5
SHI20572 Sapria himalayana HOM05D001026 ORTHO05D005232 1.6e-32 145.6 114 51.8
Psat0s3076g0120 Pisum sativum HOM05D003435 ORTHO05D004032 1.2e-27 129.4 181 41.4
QL02p059881 Quercus lobata HOM05D001026 ORTHO05D005232 4.6e-27 127.5 151 49.7
Psat3g007920 Pisum sativum HOM05D001026 ORTHO05D005232 1.9e-25 122.1 152 43.4
SEGI_36321 Sequoiadendron giganteum HOM05D001026 ORTHO05D005232 8.2e-24 116.7 102 49.0
SEGI_27036 Sequoiadendron giganteum HOM05D001026 ORTHO05D005232 6.9e-23 113.6 92 53.3
Psat4g129920 Pisum sativum HOM05D003435 ORTHO05D004032 2.2e-21 108.6 208 33.7
Psat0s3521g0080 Pisum sativum HOM05D000555 ORTHO05D001906 2.1e-19 102.1 113 48.7
HPP92_016951 Vanilla planifolia HOM05D001026 ORTHO05D005232 2.5e-17 95.1 77 50.6
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 7.4e-17 93.6 143 39.9
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 5.3e-15 87.4 82 53.7
AagrBONN_evm.TU.Sc2ySwM_368.2118 Anthoceros agrestis HOM05D001026 ORTHO05D005232 3.2e-12 78.2 48 83.3
Psat7g123360 Pisum sativum HOM05D002169 ORTHO05D006577 1.8e-10 72.4 118 31.4
SHI20575 Sapria himalayana HOM05D001026 ORTHO05D005232 8.8e-10 70.1 49 63.3
Psat0s1135g0080 Pisum sativum HOM05D001026 ORTHO05D005232 1.7e-08 65.9 52 51.9
Psat0s3199g0080 Pisum sativum HOM05D000071 ORTHO05D022797 5.3e-07 60.8 118 37.3


User provided reference genes

Program Settings