Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 3.8e-66 254.6 122 100.0
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 4.1e-44 181.4 111 72.1
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 7.1e-44 180.6 119 66.4
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 9.2e-44 180.3 111 71.2
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 9.2e-44 180.3 111 71.2
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.2e-43 179.9 111 72.1
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 1.2e-43 179.9 118 67.8
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 2.1e-43 179.1 118 67.8
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 2.7e-43 178.7 111 70.3
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 2.7e-43 178.7 118 66.9
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 2.7e-43 178.7 118 66.9
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 3.5e-43 178.3 111 70.3
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 3.5e-43 178.3 111 71.2
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 3.5e-43 178.3 118 66.9
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 3.5e-43 178.3 111 70.3
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 4.6e-43 177.9 118 66.9
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 6.0e-43 177.6 111 66.7
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 7.8e-43 177.2 111 70.3
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 7.8e-43 177.2 111 70.3
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 7.8e-43 177.2 118 66.1
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 1.0e-42 176.8 111 69.4
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 1.0e-42 176.8 118 66.9
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 1.0e-42 176.8 118 67.8
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 1.3e-42 176.4 115 67.0
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.7e-42 176.0 111 69.4
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 2.3e-42 175.6 118 66.9
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 2.3e-42 175.6 118 66.1
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.3e-42 175.6 111 69.4
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 2.3e-42 175.6 111 68.5
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 3.0e-42 175.3 118 64.4
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 3.0e-42 175.3 111 68.5
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 3.0e-42 175.3 118 66.9
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 3.9e-42 174.9 111 70.3
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 3.9e-42 174.9 111 68.5
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 3.9e-42 174.9 111 67.6
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 5.1e-42 174.5 111 69.4
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 5.1e-42 174.5 111 69.4
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 5.1e-42 174.5 111 69.4
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 5.1e-42 174.5 111 69.4
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 6.6e-42 174.1 119 65.5
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.6e-42 174.1 111 69.4
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 6.6e-42 174.1 111 69.4
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 8.6e-42 173.7 111 67.6
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 8.6e-42 173.7 111 67.6
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 1.1e-41 173.3 118 65.3
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 1.1e-41 173.3 118 65.3
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.1e-41 173.3 118 64.4
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 1.1e-41 173.3 118 66.9
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 1.5e-41 172.9 111 67.6
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 1.5e-41 172.9 118 63.6
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 1.9e-41 172.6 111 68.5
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.9e-41 172.6 111 68.5
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.9e-41 172.6 111 68.5
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.9e-41 172.6 111 68.5
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.9e-41 172.6 111 66.7
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 2.5e-41 172.2 119 64.7
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 3.3e-41 171.8 111 65.8
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 3.3e-41 171.8 111 65.8
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 3.3e-41 171.8 118 63.6
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 4.3e-41 171.4 118 66.1
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 4.3e-41 171.4 111 68.5
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 4.3e-41 171.4 111 67.6
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 4.3e-41 171.4 118 63.6
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 5.6e-41 171.0 111 66.7
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 5.6e-41 171.0 119 66.4
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 5.6e-41 171.0 118 64.4
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 9.5e-41 170.2 111 67.6
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 9.5e-41 170.2 111 67.6
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 9.5e-41 170.2 118 64.4
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 9.5e-41 170.2 111 64.9
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 1.2e-40 169.9 111 65.8
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 1.6e-40 169.5 111 63.1
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 1.6e-40 169.5 111 66.7
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.6e-40 169.5 124 63.7
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 2.1e-40 169.1 111 66.7
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 3.6e-40 168.3 111 64.9
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 4.7e-40 167.9 111 63.1
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 4.7e-40 167.9 111 65.8
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 6.2e-40 167.5 118 64.4
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 6.2e-40 167.5 111 64.0
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 8.1e-40 167.2 111 64.9
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 1.1e-39 166.8 111 64.0
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 1.8e-39 166.0 111 63.1
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 4.0e-39 164.9 111 61.3
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 4.0e-39 164.9 111 61.3
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 4.0e-39 164.9 111 61.3
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 4.0e-39 164.9 111 63.1
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 5.2e-39 164.5 111 62.2
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 2.0e-38 162.5 111 64.0
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 3.4e-38 161.8 111 64.0
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 4.4e-38 161.4 111 60.4
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 5.8e-38 161.0 111 63.1
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 5.8e-38 161.0 130 58.5
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 7.6e-38 160.6 111 60.4
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 7.6e-38 160.6 112 68.8
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 7.6e-38 160.6 111 59.5
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 7.6e-38 160.6 111 60.4
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 9.9e-38 160.2 111 61.3
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 3.7e-37 158.3 111 59.5
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 8.3e-37 157.1 119 58.8
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 8.3e-37 157.1 112 62.5
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 3.2e-36 155.2 111 57.7
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 2.8e-32 142.1 90 68.9
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 3.6e-32 141.7 111 60.4
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 6.2e-32 141.0 90 67.8
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 8.1e-32 140.6 111 59.5
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 5.8e-30 134.4 91 64.8
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 4.9e-29 131.3 111 54.1
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 5.1e-26 121.3 93 60.2
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 4.3e-25 118.2 111 47.7
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 6.2e-24 114.4 118 43.2
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 4.9e-21 104.8 68 66.2
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 4.9e-21 104.8 68 66.2
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 1.9e-20 102.8 111 45.0
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.7e-19 99.0 61 70.5
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 1.0e-18 97.1 68 63.2
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 3.4e-14 82.0 47 72.3
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 5.8e-14 81.3 108 33.3
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.7e-13 79.7 48 68.8
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.2e-13 79.3 51 64.7
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 8.4e-13 77.4 48 66.7
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 2.7e-11 72.4 48 60.4
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 5.1e-10 68.2 122 33.6
Cre03.g208049 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D139805 9.0e-07 57.4 76 42.1


User provided reference genes

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