Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0146 Selaginella moellendorffii HOM05D004914 ORTHO05D006512 0.0e+00 1317.0 680 100.0
HanXRQChr13g0411091 Helianthus annuus HOM05D004914 ORTHO05D006512 2.0e-305 1052.0 655 80.9
Dinv37416 Davidia involucrata HOM05D004914 ORTHO05D006512 9.9e-305 1049.7 660 80.3
CSS0032490 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.7e-304 1048.9 655 80.9
CSS0049486 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.4e-303 1045.8 655 80.6
ATR0829G119 Amborella trichopoda HOM05D004914 ORTHO05D006512 2.7e-302 1041.6 661 79.6
Nn3g19257 Nelumbo nucifera HOM05D004914 ORTHO05D006512 2.7e-302 1041.6 657 80.7
ECA240G3397 Erigeron canadensis HOM05D004914 ORTHO05D006512 3.5e-302 1041.2 655 80.2
Solyc08g075570.4 Solanum lycopersicum HOM05D004914 ORTHO05D006512 4.6e-302 1040.8 655 79.2
Cc08_g05310 Coffea canephora HOM05D004914 ORTHO05D006512 6.0e-302 1040.4 657 79.8
Eucgr.E01217 Eucalyptus grandis HOM05D004914 ORTHO05D006512 6.0e-302 1040.4 658 80.4
MD06G1017300 Malus domestica HOM05D004914 ORTHO05D006512 1.3e-301 1039.3 658 80.1
Ciclev10000444m.g Citrus clementina HOM05D004914 ORTHO05D006512 1.8e-301 1038.9 657 79.9
Lj2g0015407 Lotus japonicus HOM05D004914 ORTHO05D006512 1.8e-301 1038.9 658 80.4
Sopen08g024250 Solanum pennellii HOM05D004914 ORTHO05D006512 3.0e-301 1038.1 655 79.2
Atru.chr6.2105 Acer truncatum HOM05D004914 ORTHO05D006512 3.9e-301 1037.7 664 79.7
TAR375G1103 Trochodendron aralioides HOM05D004914 ORTHO05D006512 5.1e-301 1037.3 661 79.0
SalBow4G0569 Salvia bowleyana HOM05D004914 ORTHO05D006512 1.5e-300 1035.8 655 80.2
Prupe.5G019100 Prunus persica HOM05D004914 ORTHO05D006512 3.3e-300 1034.6 658 79.9
CiPaw.13G121600 Carya illinoinensis HOM05D004914 ORTHO05D006512 4.3e-300 1034.2 656 79.9
Peaxi162Scf00053g00525 Petunia axillaris HOM05D004914 ORTHO05D006512 5.6e-300 1033.9 655 79.1
PGR042G1968 Punica granatum HOM05D004914 ORTHO05D006512 7.4e-300 1033.5 658 79.3
Nn1g02045 Nelumbo nucifera HOM05D004914 ORTHO05D006512 1.6e-299 1032.3 659 79.5
Potri.003G104000 Populus trichocarpa HOM05D004914 ORTHO05D006512 2.8e-299 1031.6 656 79.6
Medtr5g026640 Medicago truncatula HOM05D004914 ORTHO05D006512 4.8e-299 1030.8 658 78.6
Mapoly0022s0194 Marchantia polymorpha HOM05D004914 ORTHO05D006512 6.2e-299 1030.4 660 79.7
FvH4_5g24140 Fragaria vesca HOM05D004914 ORTHO05D006512 8.1e-299 1030.0 657 79.5
SEGI_38788 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.8e-298 1028.9 664 78.8
RcHm_v2.0_Chr7g0213721 Rosa chinensis HOM05D004914 ORTHO05D006512 2.4e-298 1028.5 657 79.5
GSVIVG01022810001 Vitis vinifera HOM05D004914 ORTHO05D006512 2.4e-298 1028.5 656 79.3
Oeu046797.1 Olea europaea HOM05D004914 ORTHO05D006512 3.1e-298 1028.1 662 78.7
MSTRG.25735 Avicennia marina HOM05D004914 ORTHO05D006512 6.9e-298 1026.9 655 78.5
Aqoxy7G00885 Aquilegia oxysepala HOM05D004914 ORTHO05D006512 9.0e-298 1026.5 663 78.6
TWI12G0750 Tripterygium wilfordii HOM05D004914 ORTHO05D006512 2.6e-297 1025.0 657 79.1
Lsat_1_v5_gn_5_55660 Lactuca sativa HOM05D004914 ORTHO05D006512 3.4e-297 1024.6 655 78.3
CANSAT35G0949 Cannabis sativa HOM05D004914 ORTHO05D006512 1.3e-296 1022.7 657 77.6
Manes.17G007000 Manihot esculenta HOM05D004914 ORTHO05D006512 1.3e-296 1022.7 659 78.9
RcHm_v2.0_Chr7g0213811 Rosa chinensis HOM05D004914 ORTHO05D006512 1.3e-296 1022.7 657 79.3
TPR.G17253 Trifolium pratense HOM05D004914 ORTHO05D006512 2.2e-296 1021.9 658 78.4
Psat2g142640 Pisum sativum HOM05D004914 ORTHO05D006512 4.9e-296 1020.8 660 78.0
Phvul.002G127200 Phaseolus vulgaris HOM05D004914 ORTHO05D006512 1.4e-295 1019.2 660 78.2
Duzib205G0746 Durio zibethinus HOM05D004914 ORTHO05D006512 4.2e-295 1017.7 660 78.0
VMungo1215G3133 Vigna mungo HOM05D004914 ORTHO05D006512 4.2e-295 1017.7 660 78.0
CSS0043328 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 5.5e-295 1017.3 655 79.1
Eucgr.E01215 Eucalyptus grandis HOM05D004914 ORTHO05D006512 1.2e-294 1016.1 658 78.7
Thecc.03G324700 Theobroma cacao HOM05D004914 ORTHO05D006512 1.6e-294 1015.8 660 78.3
PSO717G0130 Papaver somniferum HOM05D004914 ORTHO05D006512 2.7e-294 1015.0 669 77.0
Lalb_Chr05g0215361 Lupinus albus HOM05D004914 ORTHO05D006512 3.5e-294 1014.6 657 78.2
HPP92_015125 Vanilla planifolia HOM05D004914 ORTHO05D006512 4.6e-294 1014.2 657 78.5
MELO3C013790.2 Cucumis melo HOM05D004914 ORTHO05D006512 2.3e-293 1011.9 659 77.1
Gorai.005G228700 Gossypium raimondii HOM05D004914 ORTHO05D006512 2.3e-293 1011.9 660 77.0
Pp3c1_21890 Physcomitrium patens HOM05D004914 ORTHO05D006512 3.0e-293 1011.5 655 77.9
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 5.1e-293 1010.7 658 77.7
CDE12G0485 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 8.7e-293 1010.0 660 77.4
Sabra03G0071100 Salix brachista HOM05D004914 ORTHO05D006512 1.1e-292 1009.6 684 75.9
Glyma.04G123700 Glycine max HOM05D004914 ORTHO05D006512 1.9e-292 1008.8 658 78.4
CsaV3_3G001000 Cucumis sativus L. HOM05D004914 ORTHO05D006512 3.3e-292 1008.1 657 76.7
CARHR176690 Cardamine hirsuta HOM05D004914 ORTHO05D006512 7.4e-292 1006.9 659 76.9
Os10g0580400 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D006512 2.8e-291 1005.0 657 78.2
RcHm_v2.0_Chr4g0401521 Rosa chinensis HOM05D004914 ORTHO05D006512 2.8e-291 1005.0 657 77.5
RcHm_v2.0_Chr4g0401421 Rosa chinensis HOM05D004914 ORTHO05D006512 5.3e-290 1000.7 657 76.9
BraA09t37776Z Brassica rapa HOM05D004914 ORTHO05D006512 6.9e-290 1000.3 658 77.1
A09p21740 Brassica napus HOM05D004914 ORTHO05D006512 9.0e-290 1000.0 658 76.9
Pp3c14_7160 Physcomitrium patens HOM05D004914 ORTHO05D006512 9.0e-290 1000.0 660 76.8
Aa31LG9G7630 Aethionema arabicum HOM05D004914 ORTHO05D006512 1.2e-289 999.6 662 76.1
BcaB07g30888 Brassica carinata HOM05D004914 ORTHO05D006512 1.2e-289 999.6 658 77.2
Carub.0008s0273 Capsella rubella HOM05D004914 ORTHO05D006512 2.0e-289 998.8 659 76.9
BcaC04g21765 Brassica carinata HOM05D004914 ORTHO05D006512 7.6e-289 996.9 658 76.7
C09p27840 Brassica napus HOM05D004914 ORTHO05D006512 7.6e-289 996.9 658 76.7
BolC9t55648H Brassica oleracea HOM05D004914 ORTHO05D006512 7.6e-289 996.9 658 76.7
Gohir.D02G202952 Gossypium hirsutum HOM05D004914 ORTHO05D006512 2.2e-288 995.3 660 75.9
Sp2g10330 Schrenkiella parvula HOM05D004914 ORTHO05D006512 4.9e-288 994.2 658 75.7
ClCG10G000930 Citrullus lanatus HOM05D004914 ORTHO05D006512 6.5e-288 993.8 656 76.2
Sed0010004 Sechium edule HOM05D004914 ORTHO05D006512 8.4e-288 993.4 659 75.4
Zm00001eb279810 Zea mays HOM05D004914 ORTHO05D006512 6.0e-286 987.3 663 76.2
CSS0023780 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.0e-285 986.5 655 77.7
BcaB07g30458 Brassica carinata HOM05D004914 ORTHO05D006512 1.3e-285 986.1 659 76.0
Thhalv10000803m.g Eutrema salsugineum HOM05D004914 ORTHO05D006512 3.0e-285 984.9 656 74.7
AT5G45380 Arabidopsis thaliana HOM05D004914 ORTHO05D006512 1.1e-284 983.0 659 75.0
Actinidia01258 Actinidia chinensis HOM05D004914 ORTHO05D006512 1.9e-284 982.2 655 76.8
A02p29100 Brassica napus HOM05D004914 ORTHO05D006512 2.5e-284 981.9 659 75.4
BraA02t07943Z Brassica rapa HOM05D004914 ORTHO05D006512 9.6e-284 979.9 659 75.1
arahy.Tifrunner.gnm1.ann1.AE6EEZ Arachis hypogaea HOM05D004914 ORTHO05D006512 1.6e-283 979.2 659 76.6
arahy.Tifrunner.gnm1.ann1.Q0IN0Q Arachis hypogaea HOM05D004914 ORTHO05D006512 1.6e-283 979.2 659 76.6
Eucgr.E01216 Eucalyptus grandis HOM05D004914 ORTHO05D006512 2.1e-283 978.8 615 80.8
BcaC03g16746 Brassica carinata HOM05D004914 ORTHO05D006512 6.9e-282 973.8 659 75.0
C02p46180 Brassica napus HOM05D004914 ORTHO05D006512 6.9e-282 973.8 659 75.0
BolC2t10674H Brassica oleracea HOM05D004914 ORTHO05D006512 6.9e-282 973.8 659 75.0
Rhsim11G0034500 Rhododendron simsii HOM05D004914 ORTHO05D006512 5.0e-280 967.6 658 76.1
Migut.A00542 Erythranthe guttata HOM05D004914 ORTHO05D006512 1.1e-279 966.5 653 75.2
Ca_25087_v3 Cicer arietinum L. HOM05D004914 ORTHO05D006512 5.5e-279 964.1 618 79.8
DCAR_006313 Daucus carota HOM05D004914 ORTHO05D006512 9.3e-279 963.4 663 75.1
vmacro00075 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 6.7e-277 957.2 661 75.8
CSS0040630 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.2e-275 952.2 684 72.7
QL12p001913 Quercus lobata HOM05D004914 ORTHO05D006512 4.1e-274 948.0 657 74.3
QL12p001923 Quercus lobata HOM05D004914 ORTHO05D006512 6.5e-272 940.6 657 74.3
EL10Ac5g11909 Beta vulgaris HOM05D004914 ORTHO05D006512 6.1e-270 934.1 660 71.8
CAN.G1731.1 Capsicum annuum HOM05D004914 ORTHO05D006512 1.0e-269 933.3 658 73.1
AL8G13420 Arabidopsis lyrata HOM05D004914 ORTHO05D006512 3.3e-268 928.3 659 71.9
FAN04G0884 Fragaria x ananassa HOM05D004914 ORTHO05D006512 3.3e-268 928.3 678 72.3
FAN13G2505 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.1e-266 923.3 678 71.8
SGA_v2.0_scaffold96G29079 Striga asiatica HOM05D004914 ORTHO05D006512 4.2e-263 911.4 656 73.3
Gohir.A03G179800 Gossypium hirsutum HOM05D004914 ORTHO05D006512 1.6e-262 909.4 588 78.4
unitig_92.g28131 Utricularia gibba HOM05D004914 ORTHO05D006512 1.0e-256 890.2 659 69.5
Nitab4.5_0016045g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 1.3e-256 889.8 542 82.7
Mapoly0244s0005 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.2e-249 866.7 537 82.9
AUR62027313 Chenopodium quinoa HOM05D004914 ORTHO05D006512 1.5e-247 859.8 659 67.8
AagrBONN_evm.TU.Sc2ySwM_344.881 Anthoceros agrestis HOM05D004914 ORTHO05D006512 3.8e-240 835.1 527 80.8
CSS0001315 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 6.1e-238 827.8 682 65.5
FAN18G4324 Fragaria x ananassa HOM05D004914 ORTHO05D006512 9.8e-236 820.5 527 79.9
CDE01G0684 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 1.5e-231 806.6 660 65.3
vmacro00050 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 1.6e-222 776.5 653 65.2
Lj8C331T9 Lonicera japonica HOM05D004914 ORTHO05D006512 3.4e-220 768.8 656 65.7
PGSC0003DMG401007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 2.8e-214 749.2 446 84.5
AUR62007419 Chenopodium quinoa HOM05D004914 ORTHO05D006512 5.1e-208 728.4 483 76.8
MCO16G134 Micromonas commoda HOM05D004914 ORTHO05D006512 3.8e-203 712.2 671 55.3
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 9.3e-194 681.0 570 59.8
SEGI_28013 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 2.4e-186 656.4 393 85.0
SEGI_09515 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 7.1e-186 654.8 401 83.8
CSS0015562 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.9e-183 646.7 549 65.8
COL.COLO4_37234 Corchorus olitorius HOM05D004914 ORTHO05D006512 1.4e-181 640.6 609 58.0
Cre08.g360200 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 9.6e-175 617.8 651 50.2
Cre08.g360250 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 8.2e-166 588.2 643 48.5
Cre17.g703800 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 2.6e-164 583.2 665 47.7
Nitab4.5_0011552g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 4.1e-157 559.3 518 60.4
CSS0048600 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.5e-143 514.2 392 70.7
AagrBONN_evm.TU.Sc2ySwM_117.1801 Anthoceros agrestis HOM05D004914 ORTHO05D006512 2.6e-143 513.5 641 43.1
Mapoly0006s0303 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.4e-141 507.7 649 42.2
AagrBONN_evm.TU.Sc2ySwM_117.1769 Anthoceros agrestis HOM05D004914 ORTHO05D006512 3.0e-136 490.0 649 42.1
AagrBONN_evm.TU.Sc2ySwM_228.2050 Anthoceros agrestis HOM05D004914 ORTHO05D006512 4.1e-133 479.6 645 43.4
Mapoly0339s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.5e-111 407.9 248 82.7
AagrBONN_evm.TU.Sc2ySwM_228.2053 Anthoceros agrestis HOM05D004914 ORTHO05D006512 2.5e-106 390.6 403 52.1
SEGI_18257 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 2.5e-106 390.6 271 73.8
CSS0040069 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.4e-95 353.6 399 54.6
Oeu046798.1 Olea europaea HOM05D004914 ORTHO05D006512 1.3e-94 351.7 666 35.7
SEGI_16876 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 9.3e-69 265.8 225 62.7
PGSC0003DMG402007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 7.1e-61 239.6 170 67.1
CSS0006727 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 4.6e-52 210.3 170 69.4
FAN18G1875 Fragaria x ananassa HOM05D004914 ORTHO05D006512 2.5e-50 204.5 124 77.4
AagrBONN_evm.TU.Sc2ySwM_117.1738 Anthoceros agrestis HOM05D004914 ORTHO05D038447 1.1e-29 136.0 101 69.3
CSS0011428 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.2e-29 134.4 78 82.1
Mapoly1910s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.0e-27 129.4 96 66.7
arahy.Tifrunner.gnm1.ann1.N8W4DB Arachis hypogaea HOM05D004914 ORTHO05D000389 4.8e-25 120.6 63 85.7
arahy.Tifrunner.gnm1.ann1.3D8EL1 Arachis hypogaea HOM05D004914 ORTHO05D000389 2.6e-23 114.8 59 88.1
CBR_g12519 Chara braunii HOM05D004914 ORTHO05D006512 7.2e-21 106.7 95 55.8
Os02g0689066 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D038447 3.5e-15 87.8 56 78.6
CSS0022246 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D112219 1.4e-08 65.9 54 55.6
arahy.Tifrunner.gnm1.ann1.D5QS8R Arachis hypogaea HOM05D000487 ORTHO05D000389 2.3e-06 58.5 30 76.7


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