Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0137 Selaginella moellendorffii HOM05D005477 ORTHO05D006721 2.9e-41 171.4 84 100.0
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 3.6e-15 84.7 74 51.4
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 4.7e-15 84.3 74 52.7
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 4.7e-15 84.3 74 51.4
Pp3c14_13800 Physcomitrium patens HOM05D005477 ORTHO05D006721 4.7e-15 84.3 79 48.1
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 8.1e-15 83.6 83 47.0
Pp3c1_24730 Physcomitrium patens HOM05D005477 ORTHO05D006721 8.1e-15 83.6 74 51.4
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.1e-14 83.2 78 51.3
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 1.4e-14 82.8 74 48.6
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 4.0e-14 81.3 77 48.1
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 4.0e-14 81.3 74 48.6
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 4.0e-14 81.3 79 46.8
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 5.2e-14 80.9 74 50.0
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 8.9e-14 80.1 74 50.0
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 1.2e-13 79.7 83 44.6
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 1.2e-13 79.7 77 46.8
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 1.2e-13 79.7 77 48.1
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 1.2e-13 79.7 74 48.6
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 1.2e-13 79.7 74 50.0
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.2e-13 79.7 74 48.6
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 1.2e-13 79.7 80 45.0
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 1.5e-13 79.3 74 48.6
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 1.5e-13 79.3 77 46.8
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 1.5e-13 79.3 77 46.8
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 1.5e-13 79.3 77 46.8
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.5e-13 79.3 74 48.6
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 1.5e-13 79.3 74 48.6
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 1.5e-13 79.3 77 45.5
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 2.0e-13 79.0 74 48.6
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 2.6e-13 78.6 78 46.2
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 2.6e-13 78.6 77 46.8
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 2.6e-13 78.6 74 48.6
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 2.6e-13 78.6 74 47.3
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 3.4e-13 78.2 69 50.7
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 3.4e-13 78.2 74 47.3
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 4.4e-13 77.8 78 46.2
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 4.4e-13 77.8 74 48.6
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 4.4e-13 77.8 74 48.6
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 4.4e-13 77.8 74 48.6
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 4.4e-13 77.8 74 48.6
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 4.4e-13 77.8 74 47.3
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 5.8e-13 77.4 74 47.3
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 5.8e-13 77.4 72 47.2
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 5.8e-13 77.4 72 47.2
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 5.8e-13 77.4 74 45.9
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 7.6e-13 77.0 74 45.9
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 7.6e-13 77.0 74 47.3
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 7.6e-13 77.0 74 47.3
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 7.6e-13 77.0 74 45.9
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 9.9e-13 76.6 74 47.3
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 9.9e-13 76.6 74 47.3
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 9.9e-13 76.6 77 42.9
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 9.9e-13 76.6 82 47.6
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 9.9e-13 76.6 74 45.9
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 48.6
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 45.9
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 47.3
CAN.G105.21 Capsicum annuum HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 45.9
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 45.9
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 47.3
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 47.3
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 47.3
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 47.3
Mapoly0053s0096 Marchantia polymorpha HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 50.0
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 45.9
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 45.9
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.3e-12 76.3 69 55.1
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 45.9
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 1.3e-12 76.3 74 47.3
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 1.7e-12 75.9 74 45.9
CBR_g39209 Chara braunii HOM05D005477 ORTHO05D006721 1.7e-12 75.9 74 48.6
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 1.7e-12 75.9 74 47.3
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 1.7e-12 75.9 77 42.9
PGSC0003DMG400011262 Solanum tuberosum HOM05D005477 ORTHO05D006721 1.7e-12 75.9 79 44.3
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.7e-12 75.9 69 53.6
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 2.2e-12 75.5 78 43.6
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 2.2e-12 75.5 78 43.6
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 2.2e-12 75.5 69 53.6
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 2.2e-12 75.5 69 52.2
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 2.2e-12 75.5 74 45.9
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 2.2e-12 75.5 74 45.9
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 2.2e-12 75.5 74 45.9
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 2.2e-12 75.5 74 45.9
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 2.2e-12 75.5 77 44.2
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 2.2e-12 75.5 74 45.9
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 2.9e-12 75.1 74 44.6
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 2.9e-12 75.1 74 44.6
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 2.9e-12 75.1 74 45.9
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 2.9e-12 75.1 74 45.9
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 3.8e-12 74.7 74 44.6
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 3.8e-12 74.7 74 47.3
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 4.9e-12 74.3 74 45.9
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 4.9e-12 74.3 74 45.9
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 4.9e-12 74.3 74 45.9
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.9e-12 74.3 74 45.9
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 4.9e-12 74.3 74 45.9
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 4.9e-12 74.3 74 45.9
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 4.9e-12 74.3 74 45.9
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 6.4e-12 73.9 74 45.9
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 6.4e-12 73.9 74 45.9
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 6.4e-12 73.9 74 45.9
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 6.4e-12 73.9 74 43.2
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 6.4e-12 73.9 68 47.1
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 8.4e-12 73.6 74 43.2
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 8.4e-12 73.6 74 44.6
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 1.1e-11 73.2 74 45.9
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 1.1e-11 73.2 77 42.9
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 1.4e-11 72.8 69 46.4
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 1.4e-11 72.8 74 48.6
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 1.4e-11 72.8 74 45.9
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 2.4e-11 72.0 74 44.6
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 2.4e-11 72.0 74 44.6
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 2.4e-11 72.0 74 44.6
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 3.2e-11 71.6 74 44.6
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 3.2e-11 71.6 74 43.2
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 4.1e-11 71.2 74 44.6
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 4.1e-11 71.2 83 42.2
Migut.M02030 Erythranthe guttata HOM05D005477 ORTHO05D006721 2.1e-10 68.9 69 46.4
MCO10G264 Micromonas commoda HOM05D005477 ORTHO05D006721 7.8e-10 67.0 69 52.2
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 1.3e-09 66.2 69 42.0
GSVIVG01010076001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.3e-09 66.2 45 68.9
TWI15G0858 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 5.1e-09 64.3 69 42.0
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 4.3e-08 61.2 74 41.9
Oeu039133.1 Olea europaea HOM05D005477 ORTHO05D006721 1.6e-07 59.3 47 51.1


User provided reference genes

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