Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 2.4e-190 668.7 346 100.0
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 1.6e-56 224.2 366 39.9
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 3.5e-56 223.0 370 41.4
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 3.5e-56 223.0 361 42.1
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.3e-55 221.1 368 41.0
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 3.9e-55 219.5 385 38.7
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 8.7e-55 218.4 362 40.1
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 1.1e-54 218.0 368 40.8
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.5e-54 217.6 364 40.9
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 1.5e-54 217.6 368 41.0
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 1.9e-54 217.2 364 40.7
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 4.3e-54 216.1 425 38.6
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 5.6e-54 215.7 364 41.2
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 9.6e-54 214.9 354 40.1
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 1.2e-53 214.5 354 40.1
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.2e-53 214.5 365 41.1
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.6e-53 214.2 362 41.4
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.6e-53 214.2 354 40.1
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 2.1e-53 213.8 364 40.9
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 3.6e-53 213.0 366 40.2
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 4.7e-53 212.6 358 39.4
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 4.7e-53 212.6 358 39.4
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 6.2e-53 212.2 362 39.8
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 8.1e-53 211.8 358 39.4
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 8.1e-53 211.8 354 40.1
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 1.4e-52 211.1 363 40.8
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 3.1e-52 209.9 366 39.3
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 4.0e-52 209.5 358 40.5
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 4.0e-52 209.5 359 39.0
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 4.0e-52 209.5 366 39.1
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 5.3e-52 209.1 369 39.8
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 5.3e-52 209.1 358 38.8
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.3e-52 209.1 355 39.7
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 5.3e-52 209.1 358 39.7
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 5.3e-52 209.1 359 40.7
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 9.0e-52 208.4 365 38.9
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 9.0e-52 208.4 392 41.1
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 1.2e-51 208.0 363 39.1
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 1.2e-51 208.0 366 39.1
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.2e-51 208.0 362 40.1
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 1.5e-51 207.6 360 38.1
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 1.5e-51 207.6 385 38.7
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 2.0e-51 207.2 365 38.6
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 2.0e-51 207.2 364 38.5
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 2.6e-51 206.8 362 40.1
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 2.6e-51 206.8 398 36.7
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 4.4e-51 206.1 372 39.5
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 4.4e-51 206.1 386 37.3
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 4.4e-51 206.1 360 38.3
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 5.8e-51 205.7 362 40.1
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 7.6e-51 205.3 359 39.3
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 9.9e-51 204.9 362 40.3
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 1.3e-50 204.5 367 38.4
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 1.3e-50 204.5 360 39.4
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 2.2e-50 203.8 363 38.3
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 3.8e-50 203.0 362 38.7
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 3.8e-50 203.0 377 37.4
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 4.9e-50 202.6 364 38.5
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 6.4e-50 202.2 363 37.5
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 8.4e-50 201.8 373 38.9
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 1.1e-49 201.4 362 38.4
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 1.1e-49 201.4 367 38.4
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 1.1e-49 201.4 389 40.1
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 1.1e-49 201.4 360 38.9
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 1.4e-49 201.1 343 39.4
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 1.9e-49 200.7 360 37.5
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 1.9e-49 200.7 408 37.7
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 1.9e-49 200.7 377 38.7
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 3.2e-49 199.9 364 38.5
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 4.2e-49 199.5 388 37.4
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 4.2e-49 199.5 360 38.9
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 5.4e-49 199.1 377 38.2
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 5.4e-49 199.1 364 38.2
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 7.1e-49 198.7 360 38.9
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 7.1e-49 198.7 364 38.7
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 9.3e-49 198.4 376 38.8
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 1.2e-48 198.0 359 38.4
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 1.2e-48 198.0 360 39.4
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 3.5e-48 196.4 317 41.6
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 4.6e-48 196.1 360 37.8
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 4.6e-48 196.1 401 36.7
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 4.6e-48 196.1 382 39.3
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 1.3e-47 194.5 381 36.5
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 1.7e-47 194.1 372 36.6
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 2.3e-47 193.7 373 38.9
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 3.0e-47 193.4 261 46.0
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 3.0e-47 193.4 364 37.9
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 3.9e-47 193.0 318 40.6
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 5.1e-47 192.6 375 37.3
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 1.1e-46 191.4 362 39.0
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 3.3e-46 189.9 383 37.6
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 4.3e-46 189.5 404 36.9
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 5.6e-46 189.1 360 37.8
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 1.3e-45 188.0 521 32.1
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 1.3e-45 188.0 267 44.6
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 1.6e-45 187.6 387 37.2
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 2.1e-45 187.2 395 36.5
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 2.1e-45 187.2 408 36.0
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 8.1e-45 185.3 349 38.7
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 1.4e-44 184.5 474 34.4
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 3.1e-44 183.3 387 36.7
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 4.5e-43 179.5 391 34.8
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 7.6e-43 178.7 397 35.8
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 7.6e-43 178.7 401 35.9
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 1.3e-42 177.9 397 35.8
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 2.2e-42 177.2 389 36.5
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 4.9e-42 176.0 393 35.1
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 3.2e-41 173.3 351 36.8
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 3.2e-41 173.3 321 38.3
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 2.7e-40 170.2 326 39.0
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 3.5e-40 169.9 392 35.2
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 5.1e-39 166.0 399 34.8
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 6.7e-39 165.6 354 35.3
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 1.3e-37 161.4 366 35.5
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 5.3e-36 156.0 376 34.3
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.1e-32 144.1 355 34.4
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 1.4e-28 131.3 323 36.2
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 7.4e-22 109.0 235 32.8
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 7.4e-22 109.0 235 32.8
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 7.4e-22 109.0 235 32.8
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 4.8e-21 106.3 137 46.7
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 9.0e-20 102.1 282 33.3
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 1.7e-18 97.8 332 31.6
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 2.5e-17 94.0 137 44.5
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 2.1e-16 90.9 277 30.0
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 7.9e-16 89.0 142 40.1
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 1.4e-12 78.2 134 38.8
AagrBONN_evm.TU.Sc2ySwM_344.4702 Anthoceros agrestis HOM05D005438 ORTHO05D006744 9.1e-12 75.5 119 40.3
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 7.7e-11 72.4 72 52.8
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 2.9e-10 70.5 173 32.9
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 2.9e-10 70.5 173 32.9
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 6.7e-07 59.3 44 56.8
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 1.5e-06 58.2 38 68.4
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 5.7e-06 56.2 130 32.3


User provided reference genes

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