Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 2.4e-287 991.5 515 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.5e-116 424.1 540 44.6
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.0e-107 394.8 570 42.5
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.7e-102 377.5 564 41.5
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 3.7e-102 376.3 546 41.0
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.6e-100 370.9 560 40.4
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.0e-100 370.5 580 40.5
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.7e-99 367.5 556 40.3
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 2.2e-99 367.1 565 38.4
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.8e-99 366.3 564 39.5
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.8e-99 366.3 561 39.9
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.0e-99 365.9 551 39.9
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 5.0e-99 365.9 549 41.2
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 6.5e-99 365.5 548 40.0
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 6.5e-99 365.5 567 40.4
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 6.5e-99 365.5 557 39.3
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 8.5e-99 365.2 561 40.3
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.5e-98 364.4 550 40.2
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.9e-98 364.0 572 40.0
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.9e-98 364.0 542 41.1
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.9e-98 364.0 546 40.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 7.2e-98 362.1 566 40.8
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.2e-97 361.3 549 40.6
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.2e-97 361.3 549 39.7
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.2e-97 361.3 540 39.4
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.2e-97 361.3 540 39.4
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.6e-97 360.9 556 39.4
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.1e-97 360.5 563 38.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 2.1e-97 360.5 563 39.3
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.7e-97 360.1 542 40.0
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.7e-97 360.1 542 40.0
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.7e-97 360.1 552 39.5
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.7e-97 360.1 548 40.3
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 4.7e-97 359.4 551 40.5
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 6.1e-97 359.0 542 40.0
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.4e-96 357.8 571 38.5
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.4e-96 357.8 554 38.6
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.4e-96 357.8 558 39.4
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.8e-96 357.5 563 37.8
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 2.3e-96 357.1 550 39.8
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.3e-96 357.1 556 39.0
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 2.3e-96 357.1 561 39.0
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.0e-96 356.7 556 38.7
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 4.0e-96 356.3 557 38.8
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 6.8e-96 355.5 564 38.8
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.5e-95 354.4 560 38.9
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.5e-95 354.4 550 40.4
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.5e-95 354.4 560 39.1
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.5e-95 354.4 554 40.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 2.0e-95 354.0 552 40.4
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 3.4e-95 353.2 560 40.0
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 4.4e-95 352.8 564 39.2
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 4.4e-95 352.8 569 37.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 4.4e-95 352.8 561 38.9
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 5.7e-95 352.4 572 38.6
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 9.7e-95 351.7 551 40.5
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 9.7e-95 351.7 556 39.2
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.3e-94 351.3 563 37.3
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 2.2e-94 350.5 564 38.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-94 350.5 567 38.4
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 2.8e-94 350.1 567 37.7
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 2.8e-94 350.1 564 38.5
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 2.8e-94 350.1 566 38.2
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 8.3e-94 348.6 567 39.3
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.4e-93 347.8 561 38.5
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 1.8e-93 347.4 553 38.3
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-93 347.4 553 39.4
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 3.1e-93 346.7 554 38.4
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.1e-93 346.7 550 38.5
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 4.1e-93 346.3 566 37.5
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 4.1e-93 346.3 557 38.2
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 4.1e-93 346.3 564 36.9
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.3e-93 345.9 561 38.1
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 7.0e-93 345.5 562 38.1
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-92 344.7 553 39.4
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.2e-92 344.7 555 37.5
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.6e-92 344.4 559 38.3
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.7e-92 343.6 560 38.4
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.7e-92 343.6 569 37.3
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.5e-92 343.2 590 37.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 4.5e-92 342.8 569 37.1
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.3e-91 341.3 555 37.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 3.8e-91 339.7 574 38.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 6.5e-91 339.0 550 38.4
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.5e-90 337.8 558 37.6
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.5e-90 337.8 619 36.7
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 2.5e-90 337.0 597 36.9
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 4.7e-89 332.8 567 37.2
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 8.0e-89 332.0 519 41.2
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 5.2e-88 329.3 566 35.9
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.8e-86 323.6 622 35.0
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.8e-86 322.8 530 37.9
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 6.3e-86 322.4 559 36.9
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.3e-86 322.0 563 36.8
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 5.4e-85 319.3 530 38.1
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.6e-84 317.8 560 37.7
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 4.5e-84 316.2 601 35.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.2e-76 291.6 532 36.3
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.6e-76 291.2 481 37.8
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.3e-70 271.6 481 36.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 2.2e-62 244.2 437 38.0
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.5e-55 221.5 236 48.7
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.7e-54 218.0 323 39.0
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 2.1e-52 211.1 588 31.6
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 3.9e-51 206.8 226 46.0
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.6e-47 194.1 383 35.0
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 7.6e-47 192.6 171 55.0
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 6.4e-38 162.9 167 50.9
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.1e-37 159.5 168 50.0
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 6.6e-35 152.9 242 39.3
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 9.6e-34 149.1 185 45.4
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 1.4e-29 135.2 148 48.6
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 4.8e-25 120.2 348 31.3
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.5e-23 115.2 194 36.6
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.2e-13 80.9 67 50.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.1e-08 65.9 142 35.2
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 4.1e-08 63.9 102 37.3


User provided reference genes

Program Settings