Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0070 Selaginella moellendorffii HOM05D000270 ORTHO05D016962 1.3e-26 122.1 52 100.0
SMO134G0200 Selaginella moellendorffii HOM05D000270 ORTHO05D016962 1.4e-25 118.6 52 98.1
SMO239G0050 Selaginella moellendorffii HOM05D000270 ORTHO05D000163 1.2e-13 79.0 51 68.6
Hund18633 Selenicereus undatus HOM05D000270 ORTHO05D000163 5.4e-09 63.5 45 57.8
Eucgr.I00734 Eucalyptus grandis HOM05D000270 ORTHO05D000163 9.1e-09 62.8 49 55.1
Ca_13238_v3 Cicer arietinum L. HOM05D000270 ORTHO05D000163 3.5e-08 60.8 45 60.0
Glyma.14G087200 Glycine max HOM05D000270 ORTHO05D000163 3.5e-08 60.8 45 57.8
Gohir.D02G206400 Gossypium hirsutum HOM05D000270 ORTHO05D000163 3.5e-08 60.8 45 60.0
Gorai.005G233800 Gossypium raimondii HOM05D000270 ORTHO05D000163 3.5e-08 60.8 45 60.0
Lalb_Chr22g0354781 Lupinus albus HOM05D000270 ORTHO05D000163 3.5e-08 60.8 51 52.9
Atru.chr5.2429 Acer truncatum HOM05D000270 ORTHO05D000163 4.5e-08 60.5 45 60.0
Lj5g0022476 Lotus japonicus HOM05D000270 ORTHO05D000163 4.5e-08 60.5 45 60.0
Psat6g014400 Pisum sativum HOM05D000270 ORTHO05D000163 4.5e-08 60.5 51 52.9
THA.LOC104825752 Tarenaya hassleriana HOM05D000270 ORTHO05D000163 4.5e-08 60.5 51 52.9
arahy.Tifrunner.gnm1.ann1.V4B8PK Arachis hypogaea HOM05D000270 ORTHO05D000163 7.7e-08 59.7 45 57.8
arahy.Tifrunner.gnm1.ann1.VES4LD Arachis hypogaea HOM05D000270 ORTHO05D000163 7.7e-08 59.7 45 57.8
CANSAT25G3523 Cannabis sativa HOM05D000270 ORTHO05D000163 7.7e-08 59.7 45 57.8
Gohir.A03G184900 Gossypium hirsutum HOM05D000270 ORTHO05D000163 7.7e-08 59.7 45 57.8
Lalb_Chr21g0308211 Lupinus albus HOM05D000270 ORTHO05D000163 7.7e-08 59.7 45 57.8
Medtr1g106915 Medicago truncatula HOM05D000270 ORTHO05D000163 7.7e-08 59.7 45 57.8
Gohir.D04G160800 Gossypium hirsutum HOM05D000270 ORTHO05D000163 1.0e-07 59.3 45 57.8
Gorai.012G148600 Gossypium raimondii HOM05D000270 ORTHO05D000163 1.0e-07 59.3 45 57.8
Solyc01g107370.3 Solanum lycopersicum HOM05D000270 ORTHO05D000163 1.0e-07 59.3 45 55.6
Sopen01g049610 Solanum pennellii HOM05D000270 ORTHO05D000163 1.0e-07 59.3 45 55.6
PGSC0003DMG400025759 Solanum tuberosum HOM05D000270 ORTHO05D000163 1.0e-07 59.3 45 55.6
TPR.G27094 Trifolium pratense HOM05D000270 ORTHO05D000163 1.0e-07 59.3 45 57.8
BcaB05g22592 Brassica carinata HOM05D000270 ORTHO05D000163 1.3e-07 58.9 52 51.9
A02p06790 Brassica napus HOM05D000270 ORTHO05D000163 1.3e-07 58.9 52 51.9
C02p12080 Brassica napus HOM05D000270 ORTHO05D000163 1.3e-07 58.9 52 51.9
AUR62003958 Chenopodium quinoa HOM05D000270 ORTHO05D000163 1.3e-07 58.9 45 57.8
Eucgr.F02269 Eucalyptus grandis HOM05D000270 ORTHO05D000163 1.3e-07 58.9 45 57.8
Gohir.A04G119100 Gossypium hirsutum HOM05D000270 ORTHO05D000163 1.3e-07 58.9 45 57.8
Hund12653 Selenicereus undatus HOM05D000270 ORTHO05D000163 1.3e-07 58.9 45 57.8
CAN.G1078.8 Capsicum annuum HOM05D000270 ORTHO05D000163 2.2e-07 58.2 43 60.5
Glyma.17G237100 Glycine max HOM05D000270 ORTHO05D000163 2.2e-07 58.2 45 57.8
Gohir.D02G065800 Gossypium hirsutum HOM05D020119 ORTHO05D016962 2.2e-07 58.2 52 48.1
Gorai.005G074600 Gossypium raimondii HOM05D020119 ORTHO05D016962 2.2e-07 58.2 52 48.1
Actinidia12003 Actinidia chinensis HOM05D000270 ORTHO05D000163 2.9e-07 57.8 43 58.1
Carub.0008s2062 Capsella rubella HOM05D000270 ORTHO05D000163 2.9e-07 57.8 51 51.0
DCAR_029100 Daucus carota HOM05D000270 ORTHO05D000163 2.9e-07 57.8 43 58.1
Gohir.A02G060300 Gossypium hirsutum HOM05D020119 ORTHO05D016962 2.9e-07 57.8 50 48.0
DCAR_001662 Daucus carota HOM05D000270 ORTHO05D000163 3.8e-07 57.4 45 53.3
Phvul.001G025800 Phaseolus vulgaris HOM05D000270 ORTHO05D000163 3.8e-07 57.4 45 57.8
SMO146G0342 Selaginella moellendorffii HOM05D000270 ORTHO05D000163 3.8e-07 57.4 43 58.1
vmacro02769 Vaccinium macrocarpon HOM05D000270 ORTHO05D000163 3.8e-07 57.4 45 53.3
AT2G39540 Arabidopsis thaliana HOM05D000270 ORTHO05D000163 5.0e-07 57.0 51 52.9
BcaC07g38576 Brassica carinata HOM05D000270 ORTHO05D000163 5.0e-07 57.0 52 53.8
A08p33880 Brassica napus HOM05D000270 ORTHO05D000163 5.0e-07 57.0 52 53.8
A10p17100 Brassica napus HOM05D000270 ORTHO05D000163 5.0e-07 57.0 53 50.9
A10p17110 Brassica napus HOM05D000270 ORTHO05D000163 5.0e-07 57.0 53 50.9
C08p13820 Brassica napus HOM05D000270 ORTHO05D000163 5.0e-07 57.0 52 53.8
BolC8t49017H Brassica oleracea HOM05D000270 ORTHO05D000163 5.0e-07 57.0 52 53.8
BraA08t35302Z Brassica rapa HOM05D000270 ORTHO05D000163 5.0e-07 57.0 52 53.8
BraA10t43790Z Brassica rapa HOM05D000270 ORTHO05D000163 5.0e-07 57.0 53 50.9
Cpa.g.c33708 Carica papaya HOM05D000270 ORTHO05D000163 5.0e-07 57.0 51 49.0
SHI08371 Sapria himalayana HOM05D000270 ORTHO05D000163 5.0e-07 57.0 43 60.5
Sp6g21530 Schrenkiella parvula HOM05D000270 ORTHO05D000163 5.0e-07 57.0 52 51.9
AL5G18160 Arabidopsis lyrata HOM05D000270 ORTHO05D000163 6.5e-07 56.6 45 57.8
CAN.G606.25 Capsicum annuum HOM05D000270 ORTHO05D000163 6.5e-07 56.6 43 55.8
Thhalv10015142m.g Eutrema salsugineum HOM05D000270 ORTHO05D000163 6.5e-07 56.6 52 51.9
BcaC01g06543 Brassica carinata HOM05D000270 ORTHO05D000163 8.5e-07 56.2 46 56.5
BcaC02g09345 Brassica carinata HOM05D000270 ORTHO05D000163 8.5e-07 56.2 46 56.5
BcaC04g19640 Brassica carinata HOM05D000270 ORTHO05D000163 8.5e-07 56.2 53 50.9
A03p11450 Brassica napus HOM05D000270 ORTHO05D000163 8.5e-07 56.2 46 56.5
C03p13250 Brassica napus HOM05D000270 ORTHO05D000163 8.5e-07 56.2 46 56.5
C04p41560 Brassica napus HOM05D000270 ORTHO05D000163 8.5e-07 56.2 46 56.5
C09p52370 Brassica napus HOM05D000270 ORTHO05D000163 8.5e-07 56.2 53 50.9
BolC3t13788H Brassica oleracea HOM05D000270 ORTHO05D000163 8.5e-07 56.2 46 56.5
BraA03t10459Z Brassica rapa HOM05D000270 ORTHO05D000163 8.5e-07 56.2 46 56.5
CARHR273430 Cardamine hirsuta HOM05D000270 ORTHO05D000163 8.5e-07 56.2 52 51.9
Duzib116G0570 Durio zibethinus HOM05D000270 ORTHO05D016962 8.5e-07 56.2 53 49.1
SMO146G0064 Selaginella moellendorffii HOM05D000270 ORTHO05D000163 8.5e-07 56.2 45 55.6
AagrBONN_evm.TU.Sc2ySwM_228.2427 Anthoceros agrestis HOM05D000270 ORTHO05D000163 1.1e-06 55.8 51 52.9
BcaC01g03630 Brassica carinata HOM05D000270 ORTHO05D000163 1.1e-06 55.8 45 53.3
A03p41220 Brassica napus HOM05D000270 ORTHO05D000163 1.1e-06 55.8 45 53.3
C03p50320 Brassica napus HOM05D000270 ORTHO05D000163 1.1e-06 55.8 45 53.3
BraA03t13275Z Brassica rapa HOM05D000270 ORTHO05D000163 1.1e-06 55.8 45 53.3
Thhalv10009615m.g Eutrema salsugineum HOM05D000270 ORTHO05D000163 1.1e-06 55.8 52 53.8
Thhalv10022254m.g Eutrema salsugineum HOM05D000270 ORTHO05D000163 1.1e-06 55.8 45 53.3
SMO351G0340 Selaginella moellendorffii HOM05D000270 ORTHO05D000163 1.1e-06 55.8 51 47.1
Aa31sc23G120 Aethionema arabicum HOM05D000270 ORTHO05D000163 1.5e-06 55.5 43 58.1
Medtr5g036860 Medicago truncatula HOM05D000270 ORTHO05D000163 1.5e-06 55.5 43 55.8
Peaxi162Scf00449g00013 Petunia axillaris HOM05D000270 ORTHO05D000163 1.5e-06 55.5 43 55.8
Psat2g067400 Pisum sativum HOM05D000270 ORTHO05D000163 1.5e-06 55.5 51 47.1
Sp1g09260 Schrenkiella parvula HOM05D000270 ORTHO05D000163 1.5e-06 55.5 52 51.9
AL8G36400 Arabidopsis lyrata HOM05D000270 ORTHO05D000163 1.9e-06 55.1 52 50.0
AT5G59845 Arabidopsis thaliana HOM05D000270 ORTHO05D000163 1.9e-06 55.1 52 50.0
BcaC07g38612 Brassica carinata HOM05D000270 ORTHO05D000163 1.9e-06 55.1 52 53.8
BcaC07g38613 Brassica carinata HOM05D000270 ORTHO05D000163 1.9e-06 55.1 52 53.8
Carub.0005s0930 Capsella rubella HOM05D000270 ORTHO05D000163 1.9e-06 55.1 43 58.1
Carub.0251s0002 Capsella rubella HOM05D000270 ORTHO05D000163 1.9e-06 55.1 43 58.1
Glyma.18G001200 Glycine max HOM05D000270 ORTHO05D000163 1.9e-06 55.1 43 55.8
C05p08900 Brassica napus HOM05D000270 ORTHO05D000163 2.5e-06 54.7 52 50.0
BolC5t29638H Brassica oleracea HOM05D000270 ORTHO05D000163 2.5e-06 54.7 52 50.0
Cpa.g.sc580.3 Carica papaya HOM05D000270 ORTHO05D000163 3.2e-06 54.3 51 47.1
CDE05G2805 Ceratophyllum demersum HOM05D000270 ORTHO05D000163 3.2e-06 54.3 51 45.1
Gohir.A05G207500 Gossypium hirsutum HOM05D000270 ORTHO05D000163 3.2e-06 54.3 45 57.8
Gohir.D05G210900 Gossypium hirsutum HOM05D000270 ORTHO05D000163 3.2e-06 54.3 45 57.8
Gorai.009G217400 Gossypium raimondii HOM05D000270 ORTHO05D000163 3.2e-06 54.3 45 57.8
BcaC05g24947 Brassica carinata HOM05D000270 ORTHO05D000163 4.2e-06 53.9 52 50.0
Carub.0001s1005 Capsella rubella HOM05D000270 ORTHO05D000163 4.2e-06 53.9 43 58.1
COL.COLO4_20145 Corchorus olitorius HOM05D000270 ORTHO05D000163 4.2e-06 53.9 43 53.5
COL.COLO4_32394 Corchorus olitorius HOM05D000270 ORTHO05D000163 4.2e-06 53.9 43 53.5
Eucgr.K02150 Eucalyptus grandis HOM05D000270 ORTHO05D000163 4.2e-06 53.9 43 53.5
Os10g0115550 Oryza sativa ssp. japonica HOM05D000270 ORTHO05D000163 4.2e-06 53.9 44 50.0
BcaC05g24860 Brassica carinata HOM05D000270 ORTHO05D000163 5.5e-06 53.5 52 50.0
A06p07400 Brassica napus HOM05D000270 ORTHO05D000163 5.5e-06 53.5 52 50.0
BraA06t23944Z Brassica rapa HOM05D000270 ORTHO05D000163 5.5e-06 53.5 52 50.0
Psat6g002880 Pisum sativum HOM05D000270 ORTHO05D000163 5.5e-06 53.5 49 44.9
arahy.Tifrunner.gnm1.ann1.6KJ02L Arachis hypogaea HOM05D000270 ORTHO05D000163 7.2e-06 53.1 51 45.1
arahy.Tifrunner.gnm1.ann1.RM9G1V Arachis hypogaea HOM05D000270 ORTHO05D000163 7.2e-06 53.1 51 45.1
EL10Ac4g09025 Beta vulgaris HOM05D000270 ORTHO05D000163 7.2e-06 53.1 45 53.3
MBI07_g06136_MAGBIO Magnolia biondii HOM05D000270 ORTHO05D000163 7.2e-06 53.1 43 55.8
Medtr1g025220 Medicago truncatula HOM05D000270 ORTHO05D000163 7.2e-06 53.1 49 44.9
Phvul.001G247600 Phaseolus vulgaris HOM05D000270 ORTHO05D000163 7.2e-06 53.1 46 50.0
Phvul.001G268100 Phaseolus vulgaris HOM05D000270 ORTHO05D000163 7.2e-06 53.1 46 50.0
Potri.001G315500 Populus trichocarpa HOM05D000270 ORTHO05D000163 7.2e-06 53.1 43 53.5
TPR.G26703 Trifolium pratense HOM05D000270 ORTHO05D000163 7.2e-06 53.1 43 53.5
BolC5t31027H Brassica oleracea HOM05D000270 ORTHO05D000163 9.5e-06 52.8 43 53.5
LjContig00155g0025465 Lotus japonicus HOM05D000270 ORTHO05D000163 9.5e-06 52.8 43 53.5
Medtr5g036640 Medicago truncatula HOM05D000270 ORTHO05D000163 9.5e-06 52.8 43 53.5
PSO017G4839 Papaver somniferum HOM05D000270 ORTHO05D000163 9.5e-06 52.8 43 53.5
TPR.G7290 Trifolium pratense HOM05D000270 ORTHO05D000163 9.5e-06 52.8 49 44.9


User provided reference genes

Program Settings