Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 9.1e-87 323.6 164 100.0
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 4.1e-47 191.8 134 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 1.0e-45 187.2 134 64.9
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 1.1e-44 183.7 138 62.3
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 1.0e-42 177.2 132 62.9
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 2.2e-40 169.5 132 60.6
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 2.9e-40 169.1 134 60.4
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 2.9e-40 169.1 134 59.0
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 3.7e-40 168.7 134 59.7
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 4.9e-40 168.3 132 59.8
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 4.9e-40 168.3 132 59.1
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 1.1e-39 167.2 139 56.1
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 1.4e-39 166.8 132 59.8
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 1.8e-39 166.4 129 62.8
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 4.1e-39 165.2 132 59.8
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 4.1e-39 165.2 137 56.2
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 5.4e-39 164.9 132 59.1
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 5.4e-39 164.9 129 62.8
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 7.0e-39 164.5 134 57.5
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 7.0e-39 164.5 132 56.1
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 7.0e-39 164.5 132 59.1
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 7.0e-39 164.5 134 56.0
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 9.2e-39 164.1 134 57.5
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 1.2e-38 163.7 135 55.6
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 1.2e-38 163.7 134 58.2
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 1.2e-38 163.7 132 57.6
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 1.6e-38 163.3 135 59.3
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 1.6e-38 163.3 132 57.6
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 1.6e-38 163.3 132 57.6
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 2.0e-38 162.9 135 58.5
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 2.7e-38 162.5 134 56.0
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 2.7e-38 162.5 134 56.0
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 2.7e-38 162.5 139 55.4
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 2.7e-38 162.5 130 57.7
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 2.7e-38 162.5 137 56.2
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 3.5e-38 162.2 134 57.5
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.5e-38 162.2 132 56.8
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 4.6e-38 161.8 135 58.5
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 4.6e-38 161.8 135 59.3
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 4.6e-38 161.8 131 56.5
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 4.6e-38 161.8 134 55.2
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 6.0e-38 161.4 132 57.6
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 6.0e-38 161.4 132 56.8
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 7.8e-38 161.0 132 58.3
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 7.8e-38 161.0 150 56.7
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 1.0e-37 160.6 132 57.6
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 1.0e-37 160.6 134 56.0
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 1.3e-37 160.2 132 57.6
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 1.7e-37 159.8 131 57.3
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 1.7e-37 159.8 132 57.6
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 1.7e-37 159.8 134 56.7
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 2.3e-37 159.5 134 55.2
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 2.3e-37 159.5 134 56.7
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 2.3e-37 159.5 132 57.6
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 3.0e-37 159.1 134 56.7
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 3.0e-37 159.1 135 57.8
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 5.0e-37 158.3 132 57.6
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 5.0e-37 158.3 134 56.0
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 5.0e-37 158.3 139 54.0
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 6.6e-37 157.9 131 57.3
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 6.6e-37 157.9 132 56.1
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 6.6e-37 157.9 126 61.9
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 6.6e-37 157.9 132 54.5
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 8.6e-37 157.5 131 55.7
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 1.1e-36 157.1 134 55.2
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 1.1e-36 157.1 132 55.3
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 1.5e-36 156.8 132 56.8
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 1.9e-36 156.4 131 56.5
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 2.5e-36 156.0 134 53.7
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 3.3e-36 155.6 130 56.2
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 3.3e-36 155.6 132 52.3
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 5.6e-36 154.8 133 55.6
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 5.6e-36 154.8 133 55.6
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 5.6e-36 154.8 133 55.6
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 5.6e-36 154.8 131 55.0
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 7.3e-36 154.5 131 55.7
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 9.5e-36 154.1 135 55.6
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 9.5e-36 154.1 131 56.5
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 9.5e-36 154.1 131 56.5
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 1.2e-35 153.7 126 56.3
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 1.2e-35 153.7 151 53.6
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 2.1e-35 152.9 133 54.9
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 2.1e-35 152.9 133 54.9
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 2.1e-35 152.9 132 54.5
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 2.8e-35 152.5 131 55.0
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 3.6e-35 152.1 131 55.0
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 3.6e-35 152.1 131 55.0
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 3.6e-35 152.1 131 54.2
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 4.7e-35 151.8 133 53.4
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 4.7e-35 151.8 131 55.0
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 4.7e-35 151.8 131 55.0
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 4.7e-35 151.8 133 54.9
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 4.7e-35 151.8 172 46.5
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 6.2e-35 151.4 133 54.9
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 6.2e-35 151.4 133 54.9
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 8.0e-35 151.0 133 53.4
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 8.0e-35 151.0 131 55.0
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 8.0e-35 151.0 131 55.0
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 8.0e-35 151.0 133 54.1
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 8.0e-35 151.0 135 54.1
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 1.1e-34 150.6 131 51.9
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 1.1e-34 150.6 133 54.1
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 2.0e-33 146.4 132 51.5
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 7.5e-33 144.4 132 51.5
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 2.9e-32 142.5 116 58.6
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 1.4e-31 140.2 191 41.9
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 2.4e-31 139.4 114 58.8
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 1.2e-30 137.1 110 56.4
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 3.5e-30 135.6 144 49.3
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 1.3e-29 133.7 111 56.8
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 6.8e-26 121.3 110 53.6
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 5.8e-25 118.2 134 49.3
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 1.4e-23 113.6 135 45.2
FAN17G1021 Fragaria x ananassa HOM05D005904 ORTHO05D007074 3.2e-23 112.5 89 61.8
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 5.1e-21 105.1 139 39.6
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 1.2e-19 100.5 90 54.4
Nitab4.5_0007429g0020 Nicotiana tabacum HOM05D005904 ORTHO05D007074 8.9e-18 94.4 76 53.9
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 7.6e-17 91.3 84 48.8
Haze_15945 Corylus avellana HOM05D005904 ORTHO05D007074 9.9e-17 90.9 85 49.4
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 4.2e-15 85.5 79 48.1
MCO11G030 Micromonas commoda HOM05D005904 ORTHO05D007074 7.1e-15 84.7 119 39.5
TPR.G6604 Trifolium pratense HOM05D005904 ORTHO05D007074 2.5e-12 76.3 58 58.6
Ca_01193_v3 Cicer arietinum L. HOM05D005904 ORTHO05D007074 6.2e-11 71.6 58 56.9
CARHR088470 Cardamine hirsuta HOM05D005904 ORTHO05D007074 1.1e-10 70.9 57 56.1
CSS0026651 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 9.9e-09 64.3 52 59.6
MCO01G154 Micromonas commoda HOM05D005904 ORTHO05D268674 3.2e-07 59.3 165 30.3
PGR044G2333 Punica granatum HOM05D005904 ORTHO05D007074 9.3e-07 57.8 43 53.5
Atru.chr1.3683 Acer truncatum HOM05D005904 ORTHO05D007074 2.1e-06 56.6 38 63.2


User provided reference genes

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