Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO133G0029 Selaginella moellendorffii HOM05D002284 ORTHO05D002427 5.2e-104 382.1 396 100.0
SMO133G0035 Selaginella moellendorffii HOM05D005469 ORTHO05D001701 3.9e-43 179.9 116 71.6
SMO133G0010 Selaginella moellendorffii HOM05D007206 ORTHO05D002427 3.9e-19 100.1 121 46.3
BcaB06g29443 Brassica carinata HOM05D002284 ORTHO05D002427 3.7e-09 67.0 133 35.3
AL4G47100 Arabidopsis lyrata HOM05D002284 ORTHO05D002427 8.2e-09 65.9 131 34.4
Migut.F00654 Erythranthe guttata HOM05D005469 ORTHO05D001701 1.1e-08 65.5 145 37.9
Peaxi162Scf00045g02525 Petunia axillaris HOM05D000087 ORTHO05D000793 1.1e-08 65.5 132 34.8
PSO210G6121 Papaver somniferum HOM05D002284 ORTHO05D002427 1.8e-08 64.7 120 32.5
Nitab4.5_0003391g0070 Nicotiana tabacum HOM05D000087 ORTHO05D000793 2.4e-08 64.3 131 35.1
Aqoxy2G02879 Aquilegia oxysepala HOM05D002284 ORTHO05D002427 3.1e-08 63.9 136 34.6
Thhalv10001783m.g Eutrema salsugineum HOM05D002284 ORTHO05D002427 3.1e-08 63.9 121 35.5
PGSC0003DMG400030033 Solanum tuberosum HOM05D005469 ORTHO05D001701 3.1e-08 63.9 141 34.0
PSO384G1533 Papaver somniferum HOM05D002284 ORTHO05D002427 5.3e-08 63.2 121 32.2
AT2G47530 Arabidopsis thaliana HOM05D002284 ORTHO05D002427 7.0e-08 62.8 125 33.6
PSO832G3995 Papaver somniferum HOM05D002284 ORTHO05D002427 9.1e-08 62.4 116 32.8
ATR0174G015 Amborella trichopoda HOM05D005469 ORTHO05D001701 1.2e-07 62.0 124 32.3
Thecc.01G305700 Theobroma cacao HOM05D002284 ORTHO05D002427 1.2e-07 62.0 126 30.2
PSO339G6731 Papaver somniferum HOM05D002284 ORTHO05D002427 2.0e-07 61.2 118 32.2
Sopen06g016860 Solanum pennellii HOM05D005469 ORTHO05D001701 2.0e-07 61.2 132 34.1
CARHR142940 Cardamine hirsuta HOM05D002284 ORTHO05D002427 2.6e-07 60.8 132 31.1
Nitab4.5_0000058g0190 Nicotiana tabacum HOM05D005469 ORTHO05D001701 2.6e-07 60.8 148 33.8
BraSC79t46688Z Brassica rapa HOM05D002284 ORTHO05D002427 3.5e-07 60.5 132 34.8
Cc02_g06130 Coffea canephora HOM05D005469 ORTHO05D001701 4.5e-07 60.1 147 33.3
COL.COLO4_23309 Corchorus olitorius HOM05D002284 ORTHO05D002427 4.5e-07 60.1 133 31.6
Nitab4.5_0000666g0120 Nicotiana tabacum HOM05D005469 ORTHO05D001701 5.9e-07 59.7 148 33.1
CSS0013482 Camellia sinensis var. sinensis HOM05D003009 ORTHO05D001701 7.7e-07 59.3 130 34.6
Carub.0004s3027 Capsella rubella HOM05D002284 ORTHO05D002427 1.0e-06 58.9 125 32.8
Peaxi162Scf00001g00353 Petunia axillaris HOM05D002284 ORTHO05D002427 1.0e-06 58.9 128 29.7
Thecc.01G305600 Theobroma cacao HOM05D002284 ORTHO05D002427 1.0e-06 58.9 137 27.7
Lj8C63T7 Lonicera japonica HOM05D005469 ORTHO05D001701 1.7e-06 58.2 131 33.6
CAN.G19.12 Capsicum annuum HOM05D005469 ORTHO05D001701 2.2e-06 57.8 133 34.6
Potri.002G201900 Populus trichocarpa HOM05D002284 ORTHO05D002427 2.2e-06 57.8 128 30.5
AL4G47120 Arabidopsis lyrata HOM05D002284 ORTHO05D002427 2.9e-06 57.4 128 28.9
Ciclev10023328m.g Citrus clementina HOM05D002284 ORTHO05D002427 2.9e-06 57.4 122 29.5
COL.COLO4_07369 Corchorus olitorius HOM05D002284 ORTHO05D002427 2.9e-06 57.4 136 30.1
DCAR_008035 Daucus carota HOM05D003009 ORTHO05D001701 2.9e-06 57.4 140 35.7
EL10Ac7g17569 Beta vulgaris HOM05D002284 ORTHO05D002427 3.8e-06 57.0 129 31.0
CAN.G862.64 Capsicum annuum HOM05D002284 ORTHO05D002427 3.8e-06 57.0 132 28.8
Ciclev10006960m.g Citrus clementina HOM05D007206 ORTHO05D009176 3.8e-06 57.0 122 29.5
Sabra10G0142600 Salix brachista HOM05D005469 ORTHO05D001701 3.8e-06 57.0 132 35.6
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 5.0e-06 56.6 126 35.7
DCAR_002859 Daucus carota HOM05D002284 ORTHO05D002427 6.5e-06 56.2 118 30.5
Thhalv10017961m.g Eutrema salsugineum HOM05D003009 ORTHO05D001701 6.5e-06 56.2 132 32.6
Manes.16G028850 Manihot esculenta HOM05D003009 ORTHO05D001701 6.5e-06 56.2 131 33.6
Potri.010G185400 Populus trichocarpa HOM05D005469 ORTHO05D001701 6.5e-06 56.2 140 33.6
Atru.chr12.377 Acer truncatum HOM05D002284 ORTHO05D002427 8.5e-06 55.8 122 31.1
BcaB02g09517 Brassica carinata HOM05D003009 ORTHO05D001701 8.5e-06 55.8 133 32.3
BcaB02g09518 Brassica carinata HOM05D003009 ORTHO05D001701 8.5e-06 55.8 133 32.3
Haze_17260 Corylus avellana HOM05D005469 ORTHO05D001701 8.5e-06 55.8 131 33.6
MELO3C018370.2 Cucumis melo HOM05D005469 ORTHO05D001701 8.5e-06 55.8 138 32.6
Potri.008G072000 Populus trichocarpa HOM05D005469 ORTHO05D001701 8.5e-06 55.8 139 34.5
Prupe.8G264700 Prunus persica HOM05D002284 ORTHO05D002427 8.5e-06 55.8 125 32.0
THA.LOC104802180 Tarenaya hassleriana HOM05D002284 ORTHO05D002427 8.5e-06 55.8 132 31.8
THA.LOC104817480 Tarenaya hassleriana HOM05D002284 ORTHO05D002427 8.5e-06 55.8 120 32.5


User provided reference genes

Program Settings