Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 3.0e-111 405.2 208 100.0
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 6.7e-79 297.7 207 70.5
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 5.7e-78 294.7 207 67.6
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 5.7e-78 294.7 206 70.9
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.8e-77 292.4 207 71.0
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 6.3e-77 291.2 207 70.0
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-76 290.4 207 70.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 1.4e-76 290.0 206 69.9
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.4e-76 290.0 206 70.4
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.8e-76 289.7 206 69.4
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 2.4e-76 289.3 207 69.1
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 2.4e-76 289.3 206 69.9
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 3.1e-76 288.9 206 70.4
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.1e-76 288.9 206 69.4
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 3.1e-76 288.9 206 69.4
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 3.1e-76 288.9 207 69.1
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 5.3e-76 288.1 206 67.0
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 5.3e-76 288.1 206 67.0
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 7.0e-76 287.7 206 69.4
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 9.1e-76 287.3 206 69.4
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 9.1e-76 287.3 206 68.9
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 9.1e-76 287.3 206 68.4
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.6e-75 286.6 206 69.4
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.6e-75 286.6 206 69.4
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 2.7e-75 285.8 206 68.4
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.5e-75 285.4 206 68.9
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 4.5e-75 285.0 206 67.5
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.5e-75 285.0 206 68.4
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 7.7e-75 284.3 206 67.5
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 7.7e-75 284.3 206 68.9
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 7.7e-75 284.3 206 67.0
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.0e-74 283.9 206 68.9
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.3e-74 283.5 206 66.0
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 2.2e-74 282.7 206 67.5
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 2.2e-74 282.7 206 67.0
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.2e-74 282.7 206 65.5
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 2.9e-74 282.3 206 68.4
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.9e-74 282.3 206 67.5
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 3.8e-74 282.0 206 66.5
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 3.8e-74 282.0 206 67.0
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 3.8e-74 282.0 206 66.0
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 3.8e-74 282.0 206 66.0
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 3.8e-74 282.0 206 68.4
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 5.0e-74 281.6 206 67.5
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 6.5e-74 281.2 206 66.0
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.1e-73 280.4 206 66.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.1e-73 280.4 206 66.0
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.5e-73 280.0 206 67.5
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.9e-73 279.6 206 66.0
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.9e-73 279.6 206 65.5
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.5e-73 279.3 206 66.5
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 2.5e-73 279.3 206 66.5
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.5e-73 279.3 206 68.0
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 3.2e-73 278.9 207 65.7
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 3.2e-73 278.9 206 65.0
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.2e-73 278.9 206 67.5
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.2e-73 278.9 206 67.5
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 5.5e-73 278.1 206 66.0
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 5.5e-73 278.1 206 66.0
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 7.2e-73 277.7 206 65.0
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 7.2e-73 277.7 206 65.0
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 7.2e-73 277.7 206 65.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 9.4e-73 277.3 206 65.5
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 9.4e-73 277.3 206 66.0
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 9.4e-73 277.3 206 66.0
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 2.1e-72 276.2 206 65.5
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 3.6e-72 275.4 206 64.1
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 6.1e-72 274.6 206 65.5
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.0e-71 273.9 199 67.3
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.8e-71 273.1 211 64.9
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.8e-71 273.1 206 64.1
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 4.0e-71 271.9 215 63.7
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.2e-70 270.4 234 59.8
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.2e-70 270.4 234 59.8
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.5e-70 270.0 206 64.6
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.0e-70 269.6 207 65.2
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.6e-70 269.2 197 68.5
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 5.7e-70 268.1 232 60.8
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 7.5e-70 267.7 206 62.6
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 9.8e-70 267.3 192 68.8
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.1e-68 263.8 232 58.6
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 1.8e-68 263.1 192 67.7
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 7.0e-68 261.2 192 66.1
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.6e-67 260.0 192 65.6
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 2.7e-67 259.2 192 65.1
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.7e-67 259.2 196 66.3
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.3e-66 256.9 206 64.1
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 1.7e-66 256.5 197 65.5
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 8.6e-66 254.2 206 64.1
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.2e-64 250.4 206 63.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 3.6e-64 248.8 214 60.3
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 4.7e-64 248.4 192 64.6
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.2e-62 243.8 183 63.9
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.2e-62 243.8 206 60.7
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 5.0e-58 228.4 172 68.6
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.2e-56 223.8 169 69.8
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.1e-56 223.0 206 58.3
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.0e-55 220.7 176 64.2
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 4.9e-53 211.8 205 56.1
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 3.2e-52 209.1 206 56.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 7.3e-49 198.0 221 50.2
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 8.0e-48 194.5 153 68.6
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.9e-44 183.3 136 72.1
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 3.2e-44 182.6 139 70.5
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 2.7e-43 179.5 140 61.4
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.5e-38 163.7 179 50.3
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 8.3e-37 157.9 113 73.5
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 9.2e-36 154.5 112 69.6
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 3.5e-35 152.5 205 40.5
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 6.0e-35 151.8 138 59.4
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 7.3e-33 144.8 119 63.9
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 4.7e-32 142.1 106 70.8
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 4.4e-30 135.6 209 39.7
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 9.9e-30 134.4 194 38.7
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.0e-26 124.4 85 61.2
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.9e-25 120.2 107 60.7
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.4e-20 104.0 83 65.1
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.9e-20 103.6 91 53.8
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 1.5e-17 94.0 85 61.2
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 1.2e-14 84.3 101 51.5
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 2.0e-14 83.6 101 50.5
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.8e-10 70.5 43 62.8


User provided reference genes

Program Settings