Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO133G0010 Selaginella moellendorffii HOM05D007206 ORTHO05D002427 2.3e-93 345.5 170 100.0
SMO133G0035 Selaginella moellendorffii HOM05D005469 ORTHO05D001701 6.6e-24 114.8 117 50.4
SMO133G0029 Selaginella moellendorffii HOM05D002284 ORTHO05D002427 4.4e-20 102.1 121 46.3
Sabra02G0157200 Salix brachista HOM05D002284 ORTHO05D002427 9.3e-10 67.8 153 34.0
SMO241G0012 Selaginella moellendorffii HOM05D007206 ORTHO05D009176 1.2e-09 67.4 154 32.5
EL10Ac7g17569 Beta vulgaris HOM05D002284 ORTHO05D002427 2.1e-09 66.6 135 37.8
Aa31LG1G28870 Aethionema arabicum HOM05D002284 ORTHO05D002427 2.7e-09 66.2 147 31.3
Potri.002G201900 Populus trichocarpa HOM05D002284 ORTHO05D002427 1.0e-08 64.3 152 30.9
SMO232G0054 Selaginella moellendorffii HOM05D007206 ORTHO05D009176 1.0e-08 64.3 132 33.3
MD03G1291600 Malus domestica HOM05D002284 ORTHO05D002427 1.3e-08 63.9 131 31.3
PSO339G6731 Papaver somniferum HOM05D002284 ORTHO05D002427 1.3e-08 63.9 121 35.5
QL12p027850 Quercus lobata HOM05D002284 ORTHO05D002427 1.3e-08 63.9 165 31.5
AL4G47120 Arabidopsis lyrata HOM05D002284 ORTHO05D002427 2.3e-08 63.2 138 31.2
Nitab4.5_0003391g0070 Nicotiana tabacum HOM05D000087 ORTHO05D000793 2.3e-08 63.2 132 36.4
Nitab4.5_0000789g0080 Nicotiana tabacum HOM05D005469 ORTHO05D001701 3.0e-08 62.8 132 35.6
Sp4g29480 Schrenkiella parvula HOM05D002284 ORTHO05D002427 3.0e-08 62.8 137 31.4
CARHR084450 Cardamine hirsuta HOM05D007206 ORTHO05D009176 3.9e-08 62.4 99 39.4
CARHR142950 Cardamine hirsuta HOM05D002284 ORTHO05D002427 3.9e-08 62.4 136 30.9
A05p00380 Brassica napus HOM05D002284 ORTHO05D002427 5.1e-08 62.0 138 30.4
C04p00300 Brassica napus HOM05D002284 ORTHO05D002427 5.1e-08 62.0 138 30.4
BolC4t21673H Brassica oleracea HOM05D002284 ORTHO05D002427 5.1e-08 62.0 138 30.4
BraA05t19036Z Brassica rapa HOM05D002284 ORTHO05D002427 5.1e-08 62.0 138 30.4
TWI77G0103 Tripterygium wilfordii HOM05D007206 ORTHO05D009176 5.1e-08 62.0 103 36.9
Carub.0004s3028 Capsella rubella HOM05D002284 ORTHO05D002427 6.7e-08 61.6 142 28.9
Thhalv10001657m.g Eutrema salsugineum HOM05D002284 ORTHO05D002427 6.7e-08 61.6 135 30.4
PSO210G6121 Papaver somniferum HOM05D002284 ORTHO05D002427 6.7e-08 61.6 119 32.8
TWI14G0465 Tripterygium wilfordii HOM05D002284 ORTHO05D002427 6.7e-08 61.6 164 29.3
Atru.chr5.1091 Acer truncatum HOM05D002284 ORTHO05D002427 8.7e-08 61.2 119 31.9
Carub.0003s0903 Capsella rubella HOM05D007206 ORTHO05D009176 8.7e-08 61.2 99 39.4
Lalb_Chr02g0146521 Lupinus albus HOM05D002284 ORTHO05D002427 8.7e-08 61.2 143 34.3
ATR0174G015 Amborella trichopoda HOM05D005469 ORTHO05D001701 1.1e-07 60.8 124 35.5
AL3G21200 Arabidopsis lyrata HOM05D007206 ORTHO05D009176 1.1e-07 60.8 99 38.4
CANSAT80G1624 Cannabis sativa HOM05D007206 ORTHO05D009176 1.5e-07 60.5 124 32.3
DCAR_002859 Daucus carota HOM05D002284 ORTHO05D002427 1.5e-07 60.5 115 36.5
Manes.01G222400 Manihot esculenta HOM05D002284 ORTHO05D002427 1.5e-07 60.5 137 32.8
THA.LOC104812275 Tarenaya hassleriana HOM05D003009 ORTHO05D001701 1.5e-07 60.5 129 33.3
AT2G47540 Arabidopsis thaliana HOM05D002284 ORTHO05D002427 1.9e-07 60.1 123 30.1
PSO832G3995 Papaver somniferum HOM05D002284 ORTHO05D002427 1.9e-07 60.1 115 33.0
CiPaw.07G112000 Carya illinoinensis HOM05D002284 ORTHO05D002427 2.5e-07 59.7 123 33.3
Glyma.10G016700 Glycine max HOM05D002284 ORTHO05D002427 3.3e-07 59.3 138 34.1
Dinv33075 Davidia involucrata HOM05D002284 ORTHO05D002427 5.6e-07 58.5 172 29.1
Thecc.06G185700 Theobroma cacao HOM05D003009 ORTHO05D001701 5.6e-07 58.5 126 35.7
EL10Ac1g00892 Beta vulgaris HOM05D002284 ORTHO05D002427 9.6e-07 57.8 163 28.2
Duzib213G0647 Durio zibethinus HOM05D002284 ORTHO05D002427 1.3e-06 57.4 131 33.6
Oeu064785.1 Olea europaea HOM05D003009 ORTHO05D001701 1.3e-06 57.4 128 34.4
HPP92_008498 Vanilla planifolia HOM05D007206 ORTHO05D009176 1.3e-06 57.4 131 32.8
EL10Ac4g08274 Beta vulgaris HOM05D002284 ORTHO05D002427 1.6e-06 57.0 146 28.8
CiPaw.09G060900 Carya illinoinensis HOM05D003009 ORTHO05D001701 1.6e-06 57.0 129 36.4
ECA233G5177 Erigeron canadensis HOM05D007206 ORTHO05D009176 1.6e-06 57.0 101 32.7
Gorai.001G140900 Gossypium raimondii HOM05D002284 ORTHO05D002427 1.6e-06 57.0 131 32.1
Prupe.8G264700 Prunus persica HOM05D002284 ORTHO05D002427 1.6e-06 57.0 168 32.1
TWI14G0334 Tripterygium wilfordii HOM05D002284 ORTHO05D002427 1.6e-06 57.0 130 30.0
AT3G09925 Arabidopsis thaliana HOM05D007206 ORTHO05D009176 2.1e-06 56.6 99 37.4
COL.COLO4_23310 Corchorus olitorius HOM05D002284 ORTHO05D002427 2.1e-06 56.6 180 28.9
Prupe.4G048800 Prunus persica HOM05D003009 ORTHO05D001701 2.1e-06 56.6 132 31.8
Actinidia21027 Actinidia chinensis HOM05D002284 ORTHO05D002427 2.8e-06 56.2 123 30.9
Cfa000485 Carpinus fangiana HOM05D003009 ORTHO05D001701 2.8e-06 56.2 131 32.8
Hma1.2p1_0212F.1_g090275 Hydrangea macrophylla HOM05D002284 ORTHO05D002427 2.8e-06 56.2 151 30.5
Hma1.2p1_0212F.1_g090280 Hydrangea macrophylla HOM05D002284 ORTHO05D002427 2.8e-06 56.2 151 30.5
VMungo0720G1206 Vigna mungo HOM05D002284 ORTHO05D002427 2.8e-06 56.2 150 29.3
Aa31LG3G2410 Aethionema arabicum HOM05D007206 ORTHO05D009176 3.7e-06 55.8 99 38.4
EL10Ac4g08273 Beta vulgaris HOM05D002284 ORTHO05D002427 3.7e-06 55.8 155 28.4
CSS0013482 Camellia sinensis var. sinensis HOM05D003009 ORTHO05D001701 3.7e-06 55.8 128 35.2
Gohir.D07G130300 Gossypium hirsutum HOM05D002284 ORTHO05D002427 3.7e-06 55.8 131 30.5
Lsat_1_v5_gn_6_28201 Lactuca sativa HOM05D007206 ORTHO05D009176 4.8e-06 55.5 101 32.7
MD14G1096900 Malus domestica HOM05D007206 ORTHO05D009176 4.8e-06 55.5 173 28.3
Prupe.7G122800 Prunus persica HOM05D007206 ORTHO05D009176 4.8e-06 55.5 135 31.9
TAR636G0399 Trochodendron aralioides HOM05D002284 ORTHO05D002427 4.8e-06 55.5 168 29.2
Actinidia25819 Actinidia chinensis HOM05D002284 ORTHO05D002427 6.2e-06 55.1 121 28.9
Cpa.g.sc151.28 Carica papaya HOM05D002284 ORTHO05D002427 6.2e-06 55.1 146 26.7
HanXRQChr04g0105451 Helianthus annuus HOM05D002284 ORTHO05D002427 6.2e-06 55.1 141 29.8
CAN.G529.5 Capsicum annuum HOM05D003009 ORTHO05D001701 8.1e-06 54.7 129 34.1
ClCG03G008180 Citrullus lanatus HOM05D003009 ORTHO05D001701 8.1e-06 54.7 132 31.8
Thhalv10021649m.g Eutrema salsugineum HOM05D007206 ORTHO05D009176 8.1e-06 54.7 99 35.4
Glyma.10G016600 Glycine max HOM05D002284 ORTHO05D002427 8.1e-06 54.7 130 30.0
MD12G1102700 Malus domestica HOM05D007206 ORTHO05D009176 8.1e-06 54.7 173 30.6
PSO349G0113 Papaver somniferum HOM05D003009 ORTHO05D001701 8.1e-06 54.7 107 39.3
TAR636G1141 Trochodendron aralioides HOM05D002284 ORTHO05D002427 8.1e-06 54.7 130 30.0


User provided reference genes

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