Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.6e-236 820.1 405 100.0
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.5e-130 469.5 278 87.1
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.5e-127 458.8 384 65.6
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-125 453.8 293 80.2
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.3e-98 362.8 245 76.7
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.3e-81 307.8 228 71.5
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.7e-74 282.3 207 71.5
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.5e-69 266.9 332 50.9
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.8e-67 258.5 224 62.5
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.1e-64 251.5 241 59.8
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.7e-62 244.2 209 65.6
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.5e-55 219.9 260 49.6
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.4e-50 203.0 131 81.7
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.3e-45 186.4 124 72.6
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.6e-39 166.4 145 60.7
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.1e-36 157.5 180 52.8
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 3.6e-36 156.8 323 32.2
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 3.6e-36 156.8 371 31.8
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 4.7e-36 156.4 326 29.4
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 6.2e-36 156.0 326 31.9
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 2.3e-35 154.1 322 32.6
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 2.3e-35 154.1 322 32.6
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 3.1e-35 153.7 322 33.2
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 4.0e-35 153.3 374 31.0
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 1.5e-34 151.4 327 33.3
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 2.6e-34 150.6 215 35.3
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 2.6e-34 150.6 218 37.6
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 4.4e-34 149.8 220 38.2
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 7.5e-34 149.1 325 32.6
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 9.9e-34 148.7 329 32.2
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.3e-33 148.3 324 32.4
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.9e-33 146.4 304 31.2
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 4.9e-33 146.4 212 40.1
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 4.9e-33 146.4 220 38.2
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 6.4e-33 146.0 240 35.4
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 8.3e-33 145.6 233 35.6
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 1.1e-32 145.2 314 30.9
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 1.4e-32 144.8 327 32.7
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 1.4e-32 144.8 242 35.5
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 1.9e-32 144.4 213 35.7
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 1.9e-32 144.4 229 35.8
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 1.9e-32 144.4 246 35.8
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 2.4e-32 144.1 332 32.5
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 2.4e-32 144.1 214 37.4
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 2.4e-32 144.1 229 34.1
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 2.4e-32 144.1 211 37.9
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 4.1e-32 143.3 233 35.2
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 9.2e-32 142.1 330 28.8
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 9.2e-32 142.1 331 32.3
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 1.2e-31 141.7 239 35.1
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.6e-31 141.4 224 34.4
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 2.7e-31 140.6 237 35.9
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 2.7e-31 140.6 237 35.9
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 2.7e-31 140.6 217 36.4
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 2.7e-31 140.6 325 31.4
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 2.7e-31 140.6 222 35.1
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 3.5e-31 140.2 336 29.5
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 3.5e-31 140.2 214 37.4
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 6.0e-31 139.4 242 34.7
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 7.8e-31 139.0 240 35.8
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 7.8e-31 139.0 240 35.8
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 7.8e-31 139.0 240 35.0
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 7.8e-31 139.0 260 35.8
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 7.8e-31 139.0 323 31.3
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 1.0e-30 138.7 258 34.9
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 1.0e-30 138.7 240 35.4
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 1.0e-30 138.7 222 34.2
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 1.0e-30 138.7 260 35.8
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 1.0e-30 138.7 324 33.0
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.3e-30 138.3 204 36.3
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 1.3e-30 138.3 212 35.4
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 1.3e-30 138.3 220 35.5
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.3e-30 138.3 216 38.4
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 1.3e-30 138.3 323 30.0
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 2.3e-30 137.5 230 34.8
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 5.1e-30 136.3 242 34.7
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 6.6e-30 136.0 240 34.6
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 6.6e-30 136.0 314 34.1
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 6.6e-30 136.0 216 33.8
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 8.6e-30 135.6 213 37.1
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 1.9e-29 134.4 219 36.5
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 2.5e-29 134.0 209 36.8
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 2.5e-29 134.0 321 33.3
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 4.3e-29 133.3 219 36.5
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 7.3e-29 132.5 215 33.5
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 7.3e-29 132.5 209 35.4
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 1.2e-28 131.7 327 33.6
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 1.2e-28 131.7 405 30.1
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 1.6e-28 131.3 326 29.4
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 2.1e-28 131.0 206 35.0
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 3.6e-28 130.2 211 33.2
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 4.7e-28 129.8 209 35.9
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 8.1e-28 129.0 234 32.9
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.4e-27 128.3 255 35.3
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.8e-27 127.9 365 27.4
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 2.4e-27 127.5 203 37.9
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 3.1e-27 127.1 219 37.4
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 3.1e-27 127.1 225 33.8
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 4.0e-27 126.7 212 35.4
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 5.2e-27 126.3 297 30.0
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.2e-26 125.2 324 29.6
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 2.0e-26 124.4 212 35.8
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 7.6e-26 122.5 327 27.8
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 1.7e-25 121.3 222 34.7
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.9e-25 120.6 220 32.7
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 2.9e-25 120.6 209 34.9
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 2.4e-24 117.5 222 31.1
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 3.2e-24 117.1 201 32.3
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 1.9e-21 107.8 319 28.8
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 5.8e-18 96.3 307 28.0
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 9.9e-18 95.5 300 25.0
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 1.7e-17 94.7 141 35.5
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 5.4e-16 89.7 141 37.6
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 7.1e-16 89.4 132 35.6
SMO009G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.7e-14 84.7 107 49.5
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 2.9e-09 67.4 165 29.7
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 5.4e-08 63.2 211 26.1
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 1.0e-06 58.9 91 35.2
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 3.9e-06 57.0 97 34.0
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 5.1e-06 56.6 73 38.4


User provided reference genes

Program Settings