Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0501 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 8.2e-123 443.7 224 100.0
Pp3c9_19720 Physcomitrium patens HOM05D004548 ORTHO05D005402 1.1e-63 247.3 202 59.4
SMO196G0274 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 1.9e-63 246.5 192 58.9
SGA_v2.0_scaffold77G25307 Striga asiatica HOM05D004548 ORTHO05D005402 2.3e-61 239.6 214 56.5
TAR374G1650 Trochodendron aralioides HOM05D004548 ORTHO05D005402 3.1e-61 239.2 212 57.5
COL.COLO4_06519 Corchorus olitorius HOM05D004548 ORTHO05D005402 6.8e-61 238.0 214 57.0
SalBow3G2027 Salvia bowleyana HOM05D004548 ORTHO05D005402 3.4e-60 235.7 215 55.3
Gohir.D09G002300 Gossypium hirsutum HOM05D004548 ORTHO05D005402 9.9e-60 234.2 212 54.7
Eucgr.J01653 Eucalyptus grandis HOM05D004548 ORTHO05D005402 1.3e-59 233.8 214 56.1
Lj1A1122T48 Lonicera japonica HOM05D004548 ORTHO05D005402 1.7e-59 233.4 214 53.3
MSTRG.17963 Avicennia marina HOM05D004548 ORTHO05D005402 2.2e-59 233.0 213 54.9
Gorai.006G002800 Gossypium raimondii HOM05D004548 ORTHO05D005402 2.2e-59 233.0 212 54.2
Aa31LG7G10030 Aethionema arabicum HOM05D004548 ORTHO05D005402 2.9e-59 232.6 219 54.3
Gohir.A09G002500 Gossypium hirsutum HOM05D004548 ORTHO05D005402 3.7e-59 232.3 212 53.8
ATR0665G198 Amborella trichopoda HOM05D004548 ORTHO05D005402 4.9e-59 231.9 203 58.6
CSS0047568 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 6.4e-59 231.5 212 55.7
MBI07_g42009_MAGBIO Magnolia biondii HOM05D004548 ORTHO05D005402 8.4e-59 231.1 211 54.5
RcHm_v2.0_Chr4g0428441 Rosa chinensis HOM05D004548 ORTHO05D005402 8.4e-59 231.1 207 56.5
Aqoxy1G02233 Aquilegia oxysepala HOM05D004548 ORTHO05D005402 1.4e-58 230.3 211 53.6
BraA07t29333Z Brassica rapa HOM05D004548 ORTHO05D005402 2.4e-58 229.6 214 56.1
GSVIVG01025270001 Vitis vinifera HOM05D004548 ORTHO05D005402 3.2e-58 229.2 212 53.3
A07p16050 Brassica napus HOM05D004548 ORTHO05D005402 5.4e-58 228.4 214 55.6
BcaB03g14416 Brassica carinata HOM05D004548 ORTHO05D005402 7.1e-58 228.0 214 55.1
Duzib187G0077 Durio zibethinus HOM05D004548 ORTHO05D005402 7.1e-58 228.0 212 53.3
Prupe.1G211800 Prunus persica HOM05D004548 ORTHO05D005402 1.2e-57 227.3 214 53.7
BcaB03g14346 Brassica carinata HOM05D004548 ORTHO05D005402 1.6e-57 226.9 214 55.1
FvH4_4g22210 Fragaria vesca HOM05D004548 ORTHO05D005402 1.6e-57 226.9 206 56.3
Carub.0001s1957 Capsella rubella HOM05D004548 ORTHO05D005402 2.1e-57 226.5 199 55.3
C07p23420 Brassica napus HOM05D004548 ORTHO05D005402 2.7e-57 226.1 214 55.1
BolC7t42875H Brassica oleracea HOM05D004548 ORTHO05D005402 2.7e-57 226.1 214 55.1
Oeu058204.1 Olea europaea HOM05D004548 ORTHO05D005402 2.7e-57 226.1 212 54.7
Rhsim12G0068000 Rhododendron simsii HOM05D004548 ORTHO05D005402 2.7e-57 226.1 214 53.7
Oeu058206.1 Olea europaea HOM05D004548 ORTHO05D005402 3.5e-57 225.7 212 54.2
FAN07G0049 Fragaria x ananassa HOM05D004548 ORTHO05D005402 6.0e-57 224.9 207 55.6
Migut.N00675 Erythranthe guttata HOM05D004548 ORTHO05D005402 1.0e-56 224.2 214 53.3
ECA236G1448 Erigeron canadensis HOM05D004548 ORTHO05D005402 1.3e-56 223.8 214 52.3
FAN12G2246 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.7e-56 223.4 206 54.9
Thecc.01G240000 Theobroma cacao HOM05D004548 ORTHO05D005402 1.7e-56 223.4 212 52.8
Sed0003942 Sechium edule HOM05D004548 ORTHO05D005402 3.0e-56 222.6 212 51.9
CDE04G3258 Ceratophyllum demersum HOM05D004548 ORTHO05D005402 3.9e-56 222.2 204 54.4
Sp1g17810 Schrenkiella parvula HOM05D004548 ORTHO05D005402 6.6e-56 221.5 213 53.5
HanXRQChr04g0124971 Helianthus annuus HOM05D004548 ORTHO05D005402 1.1e-55 220.7 214 52.3
Lsat_1_v5_gn_5_6480 Lactuca sativa HOM05D004548 ORTHO05D005402 1.1e-55 220.7 214 52.3
Lsat_1_v5_gn_8_83161 Lactuca sativa HOM05D004548 ORTHO05D005402 1.1e-55 220.7 214 52.3
Sopen06g034370 Solanum pennellii HOM05D004548 ORTHO05D005402 1.1e-55 220.7 211 52.1
Mapoly0026s0030 Marchantia polymorpha HOM05D004548 ORTHO05D005402 1.5e-55 220.3 209 54.1
HPP92_007022 Vanilla planifolia HOM05D004548 ORTHO05D005402 1.5e-55 220.3 214 52.8
Hma1.2p1_0738F.1_g210920 Hydrangea macrophylla HOM05D004548 ORTHO05D005402 1.9e-55 219.9 212 52.4
Manes.12G130500 Manihot esculenta HOM05D004548 ORTHO05D005402 1.9e-55 219.9 214 51.9
Nn4g22076 Nelumbo nucifera HOM05D004548 ORTHO05D005402 1.9e-55 219.9 213 54.0
CAN.G874.37 Capsicum annuum HOM05D004548 ORTHO05D005402 2.5e-55 219.5 211 52.6
Nitab4.5_0001348g0030 Nicotiana tabacum HOM05D004548 ORTHO05D005402 2.5e-55 219.5 211 52.6
PSO541G3463 Papaver somniferum HOM05D004548 ORTHO05D005402 3.3e-55 219.2 217 50.7
PSO675G5153 Papaver somniferum HOM05D004548 ORTHO05D005402 3.3e-55 219.2 217 51.2
Glyma.09G186700 Glycine max HOM05D004548 ORTHO05D005402 4.3e-55 218.8 214 52.8
Thhalv10008732m.g Eutrema salsugineum HOM05D004548 ORTHO05D005402 5.6e-55 218.4 214 54.2
PGR119G2305 Punica granatum HOM05D004548 ORTHO05D005402 5.6e-55 218.4 215 51.2
Atru.chr12.1469 Acer truncatum HOM05D004548 ORTHO05D005402 7.3e-55 218.0 202 55.0
AL1G32850 Arabidopsis lyrata HOM05D004548 ORTHO05D005402 7.3e-55 218.0 216 50.9
BraA06t24724Z Brassica rapa HOM05D004548 ORTHO05D005402 7.3e-55 218.0 217 51.6
MD13G1133800 Malus domestica HOM05D004548 ORTHO05D005402 7.3e-55 218.0 207 53.6
Peaxi162Scf00235g00217 Petunia axillaris HOM05D004548 ORTHO05D005402 7.3e-55 218.0 211 51.2
CANSAT80G0994 Cannabis sativa HOM05D004548 ORTHO05D005402 9.6e-55 217.6 218 50.0
CiPaw.06G111100 Carya illinoinensis HOM05D004548 ORTHO05D005402 9.6e-55 217.6 214 51.9
Peaxi162Scf01242g00029 Petunia axillaris HOM05D004548 ORTHO05D005402 9.6e-55 217.6 211 52.1
Solyc06g082980.3 Solanum lycopersicum HOM05D004548 ORTHO05D005402 9.6e-55 217.6 211 51.2
HPP92_007039 Vanilla planifolia HOM05D004548 ORTHO05D005402 1.2e-54 217.2 209 53.6
AagrBONN_evm.TU.Sc2ySwM_228.5752 Anthoceros agrestis HOM05D004548 ORTHO05D005402 1.6e-54 216.9 209 47.8
TWI18G0021 Tripterygium wilfordii HOM05D004548 ORTHO05D005402 1.6e-54 216.9 212 53.8
BolC5t30565H Brassica oleracea HOM05D004548 ORTHO05D005402 2.1e-54 216.5 215 53.0
PGSC0003DMG400027684 Solanum tuberosum HOM05D004548 ORTHO05D005402 2.1e-54 216.5 211 50.7
CSS0003180 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 2.8e-54 216.1 205 53.2
CSS0047688 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 2.8e-54 216.1 205 53.2
Nitab4.5_0007144g0020 Nicotiana tabacum HOM05D004548 ORTHO05D005402 3.6e-54 215.7 211 52.1
QL03p048368 Quercus lobata HOM05D004548 ORTHO05D005402 3.6e-54 215.7 212 53.3
Actinidia33989 Actinidia chinensis HOM05D004548 ORTHO05D005402 4.7e-54 215.3 221 53.4
Cfa019955 Carpinus fangiana HOM05D004548 ORTHO05D005402 6.2e-54 214.9 212 51.9
THA.LOC104807222 Tarenaya hassleriana HOM05D004548 ORTHO05D005402 1.1e-53 214.2 214 53.3
unitig_0.g417 Utricularia gibba HOM05D004548 ORTHO05D005402 1.4e-53 213.8 201 56.7
CARHR020520 Cardamine hirsuta HOM05D004548 ORTHO05D005402 1.8e-53 213.4 215 51.6
Cc01_g15960 Coffea canephora HOM05D004548 ORTHO05D005402 3.1e-53 212.6 213 48.8
Potri.003G160500 Populus trichocarpa HOM05D004548 ORTHO05D005402 6.8e-53 211.5 207 53.6
Lalb_Chr14g0371281 Lupinus albus HOM05D004548 ORTHO05D005402 8.9e-53 211.1 194 57.7
MELO3C017829.2 Cucumis melo HOM05D004548 ORTHO05D005402 1.2e-52 210.7 213 47.9
Zm00001eb334120 Zea mays HOM05D004548 ORTHO05D005402 1.5e-52 210.3 201 54.7
BcaB07g32020 Brassica carinata HOM05D004548 ORTHO05D005402 2.6e-52 209.5 216 53.2
CsaV3_4G002070 Cucumis sativus L. HOM05D004548 ORTHO05D005402 3.4e-52 209.1 213 47.4
BcaC05g25903 Brassica carinata HOM05D004548 ORTHO05D005402 5.8e-52 208.4 200 56.0
ClCG07G012080 Citrullus lanatus HOM05D004548 ORTHO05D005402 5.8e-52 208.4 212 48.6
Lj2g0001774 Lotus japonicus HOM05D004548 ORTHO05D005402 5.8e-52 208.4 211 51.7
SGA_v2.0_scaffold95G28703 Striga asiatica HOM05D004548 ORTHO05D005402 5.8e-52 208.4 178 57.9
SEGI_00448 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 9.9e-52 207.6 206 51.5
Ciclev10029256m.g Citrus clementina HOM05D004548 ORTHO05D005402 1.3e-51 207.2 212 52.8
VMungo0464G1792 Vigna mungo HOM05D004548 ORTHO05D005402 1.7e-51 206.8 215 51.2
AUR62013297 Chenopodium quinoa HOM05D004548 ORTHO05D005402 2.2e-51 206.5 194 52.6
Sc17g0004750 Simmondsia chinensis HOM05D004548 ORTHO05D005402 3.8e-51 205.7 215 51.6
AT1G20050 Arabidopsis thaliana HOM05D004548 ORTHO05D005402 4.9e-51 205.3 219 48.4
Glyma.09G186800 Glycine max HOM05D004548 ORTHO05D005402 4.9e-51 205.3 199 52.8
Hund23298 Selenicereus undatus HOM05D004548 ORTHO05D005402 4.9e-51 205.3 208 49.5
Phvul.004G160000 Phaseolus vulgaris HOM05D004548 ORTHO05D005402 8.4e-51 204.5 214 50.0
TPR.G38962 Trifolium pratense HOM05D004548 ORTHO05D005402 1.1e-50 204.1 211 51.7
A06p16180 Brassica napus HOM05D004548 ORTHO05D005402 1.4e-50 203.8 199 52.8
Os01g0103600 Oryza sativa ssp. japonica HOM05D004548 ORTHO05D005402 2.4e-50 203.0 205 53.2
EL10Ac8g18737 Beta vulgaris HOM05D004548 ORTHO05D005402 4.2e-50 202.2 205 51.2
Hund18283 Selenicereus undatus HOM05D004548 ORTHO05D005402 4.2e-50 202.2 212 48.1
Medtr6g084920 Medicago truncatula HOM05D004548 ORTHO05D005402 7.1e-50 201.4 214 52.3
FAN17G2493 Fragaria x ananassa HOM05D004548 ORTHO05D005402 3.5e-49 199.1 262 43.1
PGR119G0727 Punica granatum HOM05D004548 ORTHO05D005402 1.7e-48 196.8 214 45.8
Glyma.09G186900 Glycine max HOM05D004548 ORTHO05D005402 6.6e-48 194.9 214 45.8
TPR.G38981 Trifolium pratense HOM05D004548 ORTHO05D005402 1.5e-47 193.7 211 49.8
BcaB03g14342 Brassica carinata HOM05D004548 ORTHO05D005402 2.5e-47 193.0 214 50.5
BcaC05g25905 Brassica carinata HOM05D004548 ORTHO05D005402 6.2e-46 188.3 212 50.9
DCAR_019172 Daucus carota HOM05D004548 ORTHO05D005402 3.1e-45 186.0 154 57.8
Nn3g16208 Nelumbo nucifera HOM05D004548 ORTHO05D005402 4.0e-45 185.7 162 57.4
Ca_25508_v3 Cicer arietinum L. HOM05D004548 ORTHO05D005402 6.9e-45 184.9 179 54.2
BcaB03g14411 Brassica carinata HOM05D004548 ORTHO05D005402 2.0e-44 183.3 214 49.1
TPR.G21858 Trifolium pratense HOM05D004548 ORTHO05D005402 2.6e-44 183.0 162 58.0
arahy.Tifrunner.gnm1.ann1.Y6E3CC Arachis hypogaea HOM05D004548 ORTHO05D005402 3.4e-44 182.6 149 60.4
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 3.4e-44 182.6 150 60.7
arahy.Tifrunner.gnm1.ann1.L8Q3U6 Arachis hypogaea HOM05D004548 ORTHO05D005402 5.8e-44 181.8 165 57.0
AUR62011188 Chenopodium quinoa HOM05D004548 ORTHO05D005402 1.7e-43 180.3 159 54.7
Zm00001eb126960 Zea mays HOM05D004548 ORTHO05D005402 6.4e-43 178.3 210 46.2
MD16G1144400 Malus domestica HOM05D004548 ORTHO05D005402 9.3e-42 174.5 152 57.9
vmacro15975 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 1.6e-41 173.7 207 46.4
Ciclev10002435m.g Citrus clementina HOM05D004548 ORTHO05D005402 6.0e-41 171.8 205 46.3
Ciclev10029254m.g Citrus clementina HOM05D004548 ORTHO05D005402 8.7e-40 167.9 193 48.2
Mapoly0072s0066 Marchantia polymorpha HOM05D004548 ORTHO05D005402 9.6e-39 164.5 216 43.1
EL10Ac8g18743 Beta vulgaris HOM05D004548 ORTHO05D005402 4.8e-38 162.2 203 40.4
Psat1g039080 Pisum sativum HOM05D004548 ORTHO05D005402 1.1e-37 161.0 153 53.6
C05p18540 Brassica napus HOM05D004548 ORTHO05D005402 5.3e-37 158.7 214 45.3
Cre12.g557900 Chlamydomonas reinhardtii HOM05D004548 ORTHO05D005402 5.8e-36 155.2 209 36.4
Cfa009469 Carpinus fangiana HOM05D004548 ORTHO05D005402 4.9e-35 152.1 148 52.0
SEGI_03556 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 6.4e-35 151.8 103 69.9
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 4.6e-33 145.6 212 41.0
Ciclev10006027m.g Citrus clementina HOM05D004548 ORTHO05D005402 1.8e-32 143.7 160 43.8
BcaC05g25899 Brassica carinata HOM05D004548 ORTHO05D005402 1.9e-31 140.2 214 43.0
EL10Ac8g18747 Beta vulgaris HOM05D004548 ORTHO05D005402 1.8e-29 133.7 214 35.5
vmacro04885 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 1.8e-29 133.7 214 39.7
Sabra01G0049300 Salix brachista HOM05D004548 ORTHO05D000739 5.3e-29 132.1 98 68.4
EL10Ac8g18745 Beta vulgaris HOM05D004548 ORTHO05D005402 1.4e-26 124.0 203 34.5
Oeu051508.1 Olea europaea HOM05D004548 ORTHO05D005402 2.5e-26 123.2 81 67.9
Sabra03G0116700 Salix brachista HOM05D004548 ORTHO05D005402 9.3e-26 121.3 207 39.1
Ah.09g224580 Amaranthus hybridus HOM05D004548 ORTHO05D005402 3.5e-25 119.4 205 39.0
Ah.14g079290 Amaranthus hybridus HOM05D004548 ORTHO05D005402 3.9e-24 115.9 204 39.2
Actinidia09588 Actinidia chinensis HOM05D004548 ORTHO05D005402 1.3e-22 110.9 124 50.8
Potri.001G070301 Populus trichocarpa HOM05D004548 ORTHO05D005402 1.0e-19 101.3 86 58.1
EL10Ac8g18746 Beta vulgaris HOM05D004548 ORTHO05D005402 6.5e-19 98.6 194 33.5
EL10Ac8g18744 Beta vulgaris HOM05D004548 ORTHO05D005402 3.2e-18 96.3 194 33.0
COL.COLO4_05696 Corchorus olitorius HOM05D004548 ORTHO05D005402 1.6e-17 94.0 70 64.3
CBR_g55168 Chara braunii HOM05D004548 ORTHO05D005402 2.3e-16 90.1 118 39.8
Nitab4.5_0000038g0240 Nicotiana tabacum HOM05D004548 ORTHO05D005402 2.2e-14 83.6 79 53.2
Ah.16g106680 Amaranthus hybridus HOM05D004548 ORTHO05D005402 4.1e-13 79.3 73 53.4
FAN12G3080 Fragaria x ananassa HOM05D004548 ORTHO05D005402 9.0e-13 78.2 164 36.0
Psat5g295440 Pisum sativum HOM05D004548 ORTHO05D005402 2.9e-11 73.2 80 43.8
MELO3C030902.2 Cucumis melo HOM05D004548 ORTHO05D005402 1.1e-07 61.2 76 42.1


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