Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 1.2e-247 859.4 429 100.0
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 9.7e-72 275.0 774 29.3
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 7.7e-69 265.4 773 28.2
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 6.7e-65 252.3 604 31.6
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 2.2e-63 247.3 695 29.2
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 3.1e-62 243.4 733 28.0
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 5.3e-62 242.7 762 27.6
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 1.5e-61 241.1 761 27.6
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 2.0e-61 240.7 770 27.8
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.4e-61 240.0 730 27.8
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 7.7e-61 238.8 769 27.3
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 1.0e-60 238.4 770 26.9
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 1.7e-60 237.7 769 27.2
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.7e-60 237.7 765 27.3
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 1.1e-59 235.0 763 27.1
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 1.1e-59 235.0 763 27.1
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 1.9e-59 234.2 748 27.7
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 1.9e-59 234.2 770 27.0
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 9.4e-59 231.9 736 27.0
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 2.1e-58 230.7 751 26.6
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 2.7e-58 230.3 770 27.1
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 4.7e-58 229.6 685 28.6
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 1.0e-57 228.4 770 26.9
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 1.8e-57 227.6 770 26.6
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 1.8e-57 227.6 770 27.3
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 2.3e-57 227.3 765 27.1
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 3.0e-57 226.9 774 26.7
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 3.0e-57 226.9 740 28.4
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 3.9e-57 226.5 763 26.5
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 3.9e-57 226.5 765 25.9
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 5.1e-57 226.1 767 26.3
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 6.7e-57 225.7 739 27.3
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 8.8e-57 225.3 746 26.7
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 1.5e-56 224.6 768 26.4
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 4.4e-56 223.0 765 26.4
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 5.7e-56 222.6 766 26.4
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 7.4e-56 222.2 765 26.4
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 7.4e-56 222.2 763 26.5
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 9.7e-56 221.9 768 26.6
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 9.7e-56 221.9 767 27.6
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 9.7e-56 221.9 765 26.3
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 2.8e-55 220.3 769 26.7
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 4.8e-55 219.5 765 27.1
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 1.1e-54 218.4 765 26.3
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 1.1e-54 218.4 758 26.4
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 1.1e-54 218.4 785 25.9
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 1.1e-54 218.4 771 26.3
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 1.4e-54 218.0 767 26.5
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 1.4e-54 218.0 770 26.8
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 1.4e-54 218.0 425 33.9
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 1.8e-54 217.6 763 26.6
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 2.4e-54 217.2 430 33.7
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 3.1e-54 216.9 770 25.8
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 3.1e-54 216.9 767 26.2
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 4.1e-54 216.5 774 26.2
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 4.1e-54 216.5 767 26.1
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 5.3e-54 216.1 770 26.2
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 7.0e-54 215.7 761 26.7
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 1.2e-53 214.9 771 26.1
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 2.6e-53 213.8 778 24.9
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 3.5e-53 213.4 768 26.3
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 1.0e-52 211.8 771 25.9
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 2.9e-52 210.3 771 25.6
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 3.8e-52 209.9 411 34.1
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 3.8e-52 209.9 775 26.1
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 6.5e-52 209.1 437 32.7
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 8.5e-52 208.8 789 25.7
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 1.1e-51 208.4 776 26.0
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.5e-51 208.0 772 26.3
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 3.2e-51 206.8 425 33.2
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 4.2e-51 206.5 777 25.6
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 4.2e-51 206.5 772 25.9
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 7.2e-51 205.7 433 33.3
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 2.7e-50 203.8 430 32.8
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 6.1e-50 202.6 403 33.7
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 8.0e-50 202.2 763 25.7
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 8.0e-50 202.2 783 25.7
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.8e-49 201.1 405 33.8
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 3.0e-49 200.3 723 26.3
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 2.6e-48 197.2 729 27.0
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 3.3e-48 196.8 741 27.3
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.3e-47 194.9 430 31.4
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.2e-47 194.1 432 31.2
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.8e-47 193.7 430 31.4
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 1.2e-45 188.3 870 23.9
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 1.3e-44 184.9 771 25.2
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 6.5e-44 182.6 451 28.6
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 2.7e-42 177.2 861 23.9
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 6.1e-42 176.0 702 24.9
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 1.8e-41 174.5 771 24.3
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.3e-41 174.1 435 30.1
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 6.8e-41 172.6 771 23.9
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 1.2e-40 171.8 769 24.6
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 2.6e-40 170.6 769 24.4
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.2e-37 161.8 368 31.5
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 5.0e-36 156.4 212 42.5
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 8.5e-36 155.6 421 28.3
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 8.0e-34 149.1 370 29.7
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 2.2e-31 141.0 170 45.3
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 3.5e-29 133.7 323 31.3
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.1e-26 124.4 260 31.9
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 3.7e-23 113.6 438 25.3
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 9.2e-22 109.0 426 25.1
TAR369G0180 Trochodendron aralioides HOM05D004656 ORTHO05D005404 2.7e-21 107.5 69 63.8
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 2.7e-21 107.5 391 25.1
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.8e-21 105.9 99 52.5
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 1.5e-19 101.7 178 37.1
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 4.0e-17 93.6 84 50.0
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 1.2e-16 92.0 84 50.0
Cre12.g556650 Chlamydomonas reinhardtii HOM05D004656 ORTHO05D005404 2.0e-16 91.3 66 57.6
Zm00001eb374130 Zea mays HOM05D004656 ORTHO05D005404 1.7e-15 88.2 54 66.7
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 1.4e-14 85.1 282 28.0
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 7.0e-14 82.8 357 25.2
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea HOM05D004656 ORTHO05D005404 3.5e-13 80.5 169 32.5
MCO05G135 Micromonas commoda HOM05D004656 ORTHO05D005404 1.7e-12 78.2 200 29.5
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 3.9e-12 77.0 166 30.7
Os02g0785900 Oryza sativa ssp. japonica HOM05D004656 ORTHO05D005404 2.5e-11 74.3 43 69.8
PRCOL_00000091 Prasinoderma coloniale HOM05D004656 ORTHO05D005404 9.5e-11 72.4 456 21.5
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 2.8e-10 70.9 66 56.1
Hma1.2p1_0144F.1_g064710 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 8.9e-09 65.9 35 74.3
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 9.8e-08 62.4 57 50.9
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 1.3e-07 62.0 168 29.8
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.9e-07 60.1 82 42.7
Haze_06207 Corylus avellana HOM05D004656 ORTHO05D005404 6.4e-07 59.7 35 68.6
Hma1.2p1_1241F.1_g269830 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 2.4e-06 57.8 35 65.7
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.4e-06 56.6 78 43.6
MELO3C032683.2 Cucumis melo HOM05D004656 ORTHO05D005404 9.2e-06 55.8 34 64.7


User provided reference genes

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