Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 1.0e-70 270.0 143 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 6.5e-49 197.6 141 70.9
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 2.4e-43 179.1 140 63.6
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 7.0e-43 177.6 140 61.4
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 8.0e-39 164.1 143 59.4
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 1.5e-37 159.8 143 57.3
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 1.5e-37 159.8 135 60.7
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 2.0e-37 159.5 139 59.0
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 4.4e-37 158.3 143 56.6
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 7.5e-37 157.5 143 55.2
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 1.3e-36 156.8 141 57.4
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 2.2e-36 156.0 143 55.9
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 2.2e-36 156.0 140 58.6
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.2e-36 156.0 139 57.6
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 2.8e-36 155.6 140 57.1
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 2.8e-36 155.6 142 58.5
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 4.9e-36 154.8 133 60.9
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 8.3e-36 154.1 140 55.7
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 1.4e-35 153.3 140 55.7
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.4e-35 153.3 137 56.2
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 1.8e-35 152.9 143 55.2
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.8e-35 152.9 137 56.2
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 2.4e-35 152.5 141 56.0
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 2.4e-35 152.5 143 54.5
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 2.4e-35 152.5 143 55.9
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 2.4e-35 152.5 137 55.5
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 2.4e-35 152.5 139 58.3
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 2.4e-35 152.5 139 55.4
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 3.1e-35 152.1 140 57.9
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 4.1e-35 151.8 142 56.3
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 4.1e-35 151.8 141 55.3
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 5.4e-35 151.4 143 55.2
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 5.4e-35 151.4 141 55.3
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 5.4e-35 151.4 140 55.0
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 7.0e-35 151.0 140 55.0
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 9.2e-35 150.6 141 53.2
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 9.2e-35 150.6 139 54.0
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 1.2e-34 150.2 139 56.8
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 1.2e-34 150.2 141 54.6
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 1.6e-34 149.8 141 54.6
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 1.6e-34 149.8 139 56.8
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 3.5e-34 148.7 143 53.8
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 4.5e-34 148.3 135 54.1
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 5.9e-34 147.9 141 54.6
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 5.9e-34 147.9 138 57.2
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 7.8e-34 147.5 141 54.6
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 7.8e-34 147.5 140 55.7
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 1.0e-33 147.1 141 53.2
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 1.0e-33 147.1 135 55.6
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 1.0e-33 147.1 140 56.4
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 1.3e-33 146.7 137 54.7
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 1.3e-33 146.7 137 54.0
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 1.3e-33 146.7 143 53.1
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 1.7e-33 146.4 140 55.7
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 2.3e-33 146.0 144 52.1
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 2.3e-33 146.0 135 54.8
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 2.3e-33 146.0 142 52.8
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 2.9e-33 145.6 137 56.2
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 2.9e-33 145.6 142 54.2
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 2.9e-33 145.6 142 54.2
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 5.0e-33 144.8 136 56.6
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 5.0e-33 144.8 139 55.4
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 5.0e-33 144.8 140 55.0
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 8.6e-33 144.1 156 51.3
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 8.6e-33 144.1 137 53.3
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 8.6e-33 144.1 139 53.2
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 8.6e-33 144.1 144 52.8
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 8.6e-33 144.1 140 55.0
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.1e-32 143.7 137 53.3
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 1.1e-32 143.7 142 54.9
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 1.9e-32 142.9 140 52.1
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 2.5e-32 142.5 140 52.1
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 2.5e-32 142.5 142 52.8
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 2.5e-32 142.5 142 52.8
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 2.5e-32 142.5 118 61.0
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 7.3e-32 141.0 140 51.4
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 1.2e-31 140.2 140 52.1
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 1.6e-31 139.8 140 52.1
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.0e-30 137.1 147 50.3
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 1.4e-30 136.7 140 49.3
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 4.0e-30 135.2 135 48.9
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 1.2e-29 133.7 140 50.0
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 1.2e-29 133.7 139 50.4
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 1.5e-29 133.3 145 51.7
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 2.6e-29 132.5 135 50.4
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 2.6e-29 132.5 138 49.3
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 7.5e-29 131.0 135 50.4
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 2.2e-28 129.4 136 52.9
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 2.2e-28 129.4 139 48.2
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 1.1e-27 127.1 138 52.9
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 3.2e-27 125.6 150 48.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 7.0e-27 124.4 114 57.9
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 1.6e-26 123.2 138 51.4
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 4.6e-26 121.7 136 51.5
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 3.9e-25 118.6 171 41.5
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 1.1e-24 117.1 101 55.4
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 1.5e-24 116.7 218 37.6
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 2.5e-24 115.9 90 64.4
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 2.5e-24 115.9 110 56.4
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 1.4e-22 110.2 103 53.4
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.8e-22 109.8 111 51.4
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 4.4e-21 105.1 101 52.5
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 2.5e-16 89.4 81 53.1
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 2.3e-14 82.8 84 47.6
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 2.2e-12 76.3 143 32.2
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 1.9e-11 73.2 86 47.7
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 4.7e-07 58.5 52 57.7


User provided reference genes

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