Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 1.2e-274 949.1 446 100.0
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.9e-187 659.4 438 71.7
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 2.3e-185 652.5 441 69.6
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 6.5e-180 634.4 434 70.5
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.1e-179 633.6 439 66.3
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.0e-177 627.1 436 65.8
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.0e-177 627.1 439 66.5
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.0e-177 627.1 437 66.4
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.0e-177 627.1 436 66.5
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 1.4e-177 626.7 434 67.1
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 3.0e-177 625.5 434 66.8
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 6.7e-177 624.4 434 66.1
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.2e-176 623.6 435 66.9
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.5e-176 623.2 431 67.5
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.0e-176 622.9 435 65.7
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.0e-176 622.9 433 66.5
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.6e-176 622.5 438 66.2
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 2.6e-176 622.5 435 65.7
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 3.3e-176 622.1 433 65.8
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 4.4e-176 621.7 435 66.0
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 4.4e-176 621.7 443 66.1
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 5.7e-176 621.3 436 66.1
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 5.7e-176 621.3 432 66.0
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 5.7e-176 621.3 447 65.8
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 7.5e-176 620.9 437 65.4
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.7e-175 619.8 435 65.3
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.2e-175 619.4 435 65.1
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.8e-175 619.0 431 66.6
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.8e-175 619.0 437 65.4
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 4.8e-175 618.2 436 65.4
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 4.8e-175 618.2 434 66.1
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 8.2e-175 617.5 433 66.3
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 8.2e-175 617.5 435 65.3
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.4e-174 616.7 440 65.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.4e-174 616.7 433 65.8
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.4e-174 615.9 435 65.7
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.1e-174 615.5 435 66.0
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 5.3e-174 614.8 431 65.7
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 7.0e-174 614.4 433 65.6
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 9.1e-174 614.0 432 66.4
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.6e-173 613.2 433 66.3
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.6e-173 613.2 452 63.7
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.0e-173 612.8 433 65.6
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 3.5e-173 612.1 442 64.5
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 3.5e-173 612.1 435 64.6
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 4.5e-173 611.7 433 65.4
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 7.7e-173 610.9 435 65.5
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.7e-173 610.9 432 65.5
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.7e-172 609.8 436 65.1
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 2.2e-172 609.4 442 64.0
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.2e-172 609.4 441 64.2
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.2e-172 609.4 432 66.0
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.9e-172 609.0 436 65.1
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 2.9e-172 609.0 455 63.5
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 6.5e-172 607.8 434 64.5
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 6.5e-172 607.8 436 64.9
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 6.5e-172 607.8 436 64.2
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 6.5e-172 607.8 437 65.7
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.5e-171 606.7 433 64.7
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.5e-171 606.7 430 64.9
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.5e-171 605.9 432 64.8
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 5.5e-171 604.7 433 64.7
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 9.4e-171 604.0 435 63.4
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.2e-170 603.6 433 64.4
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.2e-170 603.6 433 64.4
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.2e-170 603.6 433 64.4
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 2.1e-170 602.8 471 60.5
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 2.1e-170 602.8 471 60.5
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 2.7e-170 602.4 451 63.4
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.7e-170 602.4 432 64.4
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 4.7e-170 601.7 446 63.7
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 6.1e-170 601.3 436 64.0
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.4e-169 600.1 432 64.6
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.8e-169 599.7 430 65.1
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.8e-169 599.7 433 64.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.3e-169 599.4 434 64.1
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 4.0e-169 598.6 437 62.9
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 6.8e-169 597.8 435 65.5
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.5e-168 596.7 436 63.3
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.5e-168 596.7 435 63.2
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.5e-168 596.7 435 63.2
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.6e-168 595.9 437 62.9
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 2.6e-168 595.9 433 63.7
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 2.6e-168 595.9 433 63.5
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 3.4e-168 595.5 436 63.3
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 5.7e-168 594.7 447 63.5
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.8e-167 592.4 479 59.7
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 8.3e-167 590.9 461 61.8
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 8.3e-167 590.9 434 65.0
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.4e-166 589.3 439 62.2
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.6e-165 586.6 376 70.7
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 8.6e-164 580.9 380 69.2
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.7e-160 568.2 440 60.7
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 2.4e-158 562.8 442 61.3
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.0e-158 561.2 459 59.5
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.8e-154 549.3 470 57.2
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 5.2e-153 545.0 462 58.4
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 4.1e-150 535.4 433 58.7
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 2.8e-146 522.7 439 58.1
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.4e-142 510.4 398 59.8
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 1.0e-140 504.2 432 56.7
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.5e-136 490.3 436 55.5
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.5e-123 447.2 410 54.6
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 9.0e-121 438.0 298 68.1
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 5.8e-120 435.3 303 66.7
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 6.4e-119 431.8 321 63.6
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 2.7e-117 426.4 378 55.0
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 3.0e-108 396.4 280 66.4
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 3.0e-100 369.8 280 61.8
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.2e-59 235.0 160 65.6
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.6e-59 233.8 189 57.7
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.5e-59 232.3 194 58.2
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.5e-54 216.1 133 70.7
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 1.6e-48 198.0 211 51.2
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 2.1e-45 187.6 359 35.7
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 2.1e-45 187.6 134 63.4
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 1.4e-44 184.9 142 60.6
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.2e-43 181.8 132 61.4
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 3.3e-38 163.7 236 41.5
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.0e-36 158.7 120 62.5
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 3.4e-35 153.7 250 42.4
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.6e-32 143.3 124 50.0
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 6.6e-31 139.4 120 55.0
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 9.2e-17 92.4 88 52.3
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 5.6e-14 83.2 62 59.7
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 1.6e-13 81.6 89 47.2
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 2.4e-12 77.8 63 55.6
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 6.4e-10 69.7 55 65.5
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.9e-09 68.2 72 47.2
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 4.2e-09 67.0 55 58.2
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 9.3e-09 65.9 105 35.2
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.2e-08 65.5 86 43.0
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 2.1e-08 64.7 172 28.5


User provided reference genes

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