Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0124 Selaginella moellendorffii HOM05D008272 ORTHO05D010429 4.3e-161 571.2 281 100.0
ClCG10G005430 Citrullus lanatus HOM05D008272 ORTHO05D010429 1.6e-104 383.3 253 68.8
Potri.011G138900 Populus trichocarpa HOM05D008272 ORTHO05D010429 1.1e-103 380.6 253 68.8
Eucgr.F03464 Eucalyptus grandis HOM05D008272 ORTHO05D010429 2.4e-103 379.4 250 68.4
Cpa.g.sc97.8 Carica papaya HOM05D008272 ORTHO05D010429 3.1e-103 379.0 251 67.3
MELO3C025383.2 Cucumis melo HOM05D008272 ORTHO05D010429 5.3e-103 378.3 250 68.8
arahy.Tifrunner.gnm1.ann1.UDA7AK Arachis hypogaea HOM05D008272 ORTHO05D010429 2.0e-102 376.3 253 67.2
arahy.Tifrunner.gnm1.ann1.MV6CSW Arachis hypogaea HOM05D008272 ORTHO05D010429 3.4e-102 375.6 251 67.3
QL08p010511 Quercus lobata HOM05D008272 ORTHO05D010429 4.5e-102 375.2 251 68.9
Ciclev10008983m.g Citrus clementina HOM05D008272 ORTHO05D010429 1.0e-101 374.0 254 66.5
Thecc.07G038600 Theobroma cacao HOM05D008272 ORTHO05D010429 8.5e-101 370.9 251 66.9
CiPaw.11G188800 Carya illinoinensis HOM05D008272 ORTHO05D010429 2.5e-100 369.4 252 65.9
GSVIVG01037640001 Vitis vinifera HOM05D008272 ORTHO05D010429 2.5e-100 369.4 270 63.3
RcHm_v2.0_Chr5g0039361 Rosa chinensis HOM05D008272 ORTHO05D010429 4.2e-100 368.6 250 67.6
CiPaw.12G129300 Carya illinoinensis HOM05D008272 ORTHO05D010429 5.5e-100 368.2 277 62.8
Migut.M01769 Erythranthe guttata HOM05D008272 ORTHO05D010429 1.2e-99 367.1 240 69.6
CsaV3_3G005170 Cucumis sativus L. HOM05D008272 ORTHO05D010429 2.1e-99 366.3 250 66.8
VMungo0647G0594 Vigna mungo HOM05D008272 ORTHO05D010429 2.7e-99 365.9 261 64.8
Lalb_Chr17g0348421 Lupinus albus HOM05D008272 ORTHO05D010429 6.1e-99 364.8 251 65.3
Cc05_g13720 Coffea canephora HOM05D008272 ORTHO05D010429 4.4e-97 358.6 254 65.0
Manes.15G072400 Manihot esculenta HOM05D008272 ORTHO05D010429 4.4e-97 358.6 251 66.5
Gohir.D01G066300 Gossypium hirsutum HOM05D008272 ORTHO05D010429 7.4e-97 357.8 281 57.3
HPP92_011139 Vanilla planifolia HOM05D008272 ORTHO05D010429 9.7e-97 357.5 239 67.8
Duzib170G0415 Durio zibethinus HOM05D008272 ORTHO05D010429 1.3e-96 357.1 251 63.3
Hund01995 Selenicereus undatus HOM05D008272 ORTHO05D010429 1.3e-96 357.1 264 61.4
Gohir.A01G079200 Gossypium hirsutum HOM05D008272 ORTHO05D010429 2.2e-96 356.3 281 58.0
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.2e-96 356.3 251 64.1
Eucgr.F00768 Eucalyptus grandis HOM05D008272 ORTHO05D010429 6.3e-96 354.8 251 62.5
PGR083G1743 Punica granatum HOM05D008272 ORTHO05D010429 1.4e-95 353.6 253 62.5
ATR0752G027 Amborella trichopoda HOM05D008272 ORTHO05D010429 5.3e-95 351.7 218 72.0
FAN24G3338 Fragaria x ananassa HOM05D008272 ORTHO05D010429 1.0e-93 347.4 272 62.1
Hma1.2p1_1162F.1_g262620 Hydrangea macrophylla HOM05D008272 ORTHO05D010429 1.3e-93 347.1 239 65.3
Os04g0625200 Oryza sativa ssp. japonica HOM05D008272 ORTHO05D010429 1.1e-92 344.0 214 72.9
Hund23252 Selenicereus undatus HOM05D008272 ORTHO05D010429 1.4e-92 343.6 295 55.3
Lj1A872T54 Lonicera japonica HOM05D008272 ORTHO05D010429 1.2e-91 340.5 254 63.0
Hund14975 Selenicereus undatus HOM05D008272 ORTHO05D010429 3.0e-90 335.9 310 52.3
EL10Ac4g07813 Beta vulgaris HOM05D008272 ORTHO05D010429 5.9e-86 321.6 251 60.6
Gorai.002G088200 Gossypium raimondii HOM05D008272 ORTHO05D010429 8.5e-85 317.8 281 52.0
PGR031G2232 Punica granatum HOM05D008272 ORTHO05D010429 4.7e-83 312.0 251 59.0
Haze_09670 Corylus avellana HOM05D008272 ORTHO05D010429 1.4e-82 310.5 281 54.8
MBI02_g22115_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 5.7e-81 305.1 240 60.0
Duzib213G0361 Durio zibethinus HOM05D008272 ORTHO05D010429 5.9e-78 295.0 201 67.7
COL.COLO4_09657 Corchorus olitorius HOM05D008272 ORTHO05D010429 7.7e-78 294.7 190 71.1
VMungo0540G1205 Vigna mungo HOM05D008272 ORTHO05D010429 2.9e-77 292.7 224 63.8
Thecc.07G038700 Theobroma cacao HOM05D008272 ORTHO05D010429 2.7e-75 286.2 191 68.1
Nn004s41404 Nelumbo nucifera HOM05D008272 ORTHO05D010429 4.5e-70 268.9 177 70.6
FvH4_2g04690 Fragaria vesca HOM05D008272 ORTHO05D010429 1.0e-61 241.1 272 48.2
MBI16_g12297_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 1.0e-61 241.1 190 61.1
Sc16g0006090 Simmondsia chinensis HOM05D008272 ORTHO05D010429 1.2e-54 217.6 199 56.3
Sc03g0008620 Simmondsia chinensis HOM05D008272 ORTHO05D010429 1.6e-54 217.2 144 66.7
CAN.G337.128 Capsicum annuum HOM05D008272 ORTHO05D010429 1.0e-53 214.5 187 56.1
Sabra11G0124700 Salix brachista HOM05D008272 ORTHO05D010429 2.3e-53 213.4 149 65.8
Sabra11G0124400 Salix brachista HOM05D008272 ORTHO05D010429 1.0e-45 188.0 137 65.7
unitig_578.g15997 Utricularia gibba HOM05D008272 ORTHO05D010429 3.0e-45 186.4 126 68.3
Phvul.L001633 Phaseolus vulgaris HOM05D008272 ORTHO05D010429 1.7e-37 160.6 116 63.8
MD11G1219100 Malus domestica HOM05D008272 ORTHO05D010429 2.3e-29 133.7 240 32.5
Cfa020968 Carpinus fangiana HOM05D008272 ORTHO05D010429 1.1e-15 88.2 62 59.7
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 2.7e-14 83.6 242 29.3
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 4.6e-14 82.8 173 31.2
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 6.0e-14 82.4 191 30.9
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 1.0e-13 81.6 188 30.9
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 1.8e-13 80.9 188 32.4
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 2.3e-13 80.5 183 31.1
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 3.0e-13 80.1 156 32.1
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 3.0e-13 80.1 157 31.2
MCO11G046 Micromonas commoda HOM05D006248 ORTHO05D007896 3.9e-13 79.7 164 26.8
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 3.9e-13 79.7 136 36.0
PRCOL_00006194 Prasinoderma coloniale HOM05D006248 ORTHO05D010429 6.7e-13 79.0 116 35.3
PRCOL_00003374 Prasinoderma coloniale HOM05D008272 ORTHO05D010429 8.7e-13 78.6 133 31.6
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 8.7e-13 78.6 185 33.0
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 1.1e-12 78.2 184 31.0
MD03G1201900 Malus domestica HOM05D008272 ORTHO05D010429 1.1e-12 78.2 60 58.3
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 1.1e-12 78.2 201 30.8
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 1.5e-12 77.8 205 29.3
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 1.5e-12 77.8 217 28.1
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 1.5e-12 77.8 194 31.4
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 1.9e-12 77.4 195 30.8
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 1.9e-12 77.4 212 26.4
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 2.5e-12 77.0 184 29.3
arahy.Tifrunner.gnm1.ann1.39PYJI Arachis hypogaea HOM05D008272 ORTHO05D010429 2.5e-12 77.0 56 62.5
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 2.5e-12 77.0 142 35.2
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 2.5e-12 77.0 195 31.3
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 2.5e-12 77.0 214 29.4
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 2.5e-12 77.0 195 28.7
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 2.5e-12 77.0 204 28.9
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 3.3e-12 76.6 193 30.1
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 3.3e-12 76.6 184 29.3
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 3.3e-12 76.6 120 35.8
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 4.3e-12 76.3 123 36.6
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 4.3e-12 76.3 195 30.3
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 4.3e-12 76.3 193 30.6
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 4.3e-12 76.3 197 28.9
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 4.3e-12 76.3 184 30.4
Oeu020117.1 Olea europaea HOM05D008272 ORTHO05D010429 5.6e-12 75.9 54 57.4
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 5.6e-12 75.9 131 34.4
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 5.6e-12 75.9 198 28.8
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 5.6e-12 75.9 183 29.0
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 7.4e-12 75.5 193 28.5
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 7.4e-12 75.5 139 36.7
PRCOL_00000503 Prasinoderma coloniale HOM05D006248 ORTHO05D007896 7.4e-12 75.5 201 27.9
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 7.4e-12 75.5 131 35.1
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 7.4e-12 75.5 195 28.2
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 7.4e-12 75.5 195 28.2
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 9.6e-12 75.1 191 28.3
CDE11G0689 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 9.6e-12 75.1 170 30.0
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 9.6e-12 75.1 184 27.7
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 9.6e-12 75.1 191 28.3
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 9.6e-12 75.1 189 30.2
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 9.6e-12 75.1 186 29.0
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 1.3e-11 74.7 195 30.3
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 1.3e-11 74.7 195 30.3
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 1.3e-11 74.7 195 30.3
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 1.3e-11 74.7 186 30.1
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 1.3e-11 74.7 201 30.3
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 1.6e-11 74.3 131 34.4
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 1.6e-11 74.3 131 34.4
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 1.6e-11 74.3 131 32.8
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 1.6e-11 74.3 186 29.6
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 1.6e-11 74.3 131 32.8
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 1.6e-11 74.3 131 34.4
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 2.1e-11 73.9 195 30.8
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 2.1e-11 73.9 195 30.8
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 2.1e-11 73.9 131 32.8
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 2.1e-11 73.9 186 29.6
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 2.8e-11 73.6 131 32.8
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 2.8e-11 73.6 131 32.8
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 2.8e-11 73.6 188 30.9
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 2.8e-11 73.6 195 31.8
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 2.8e-11 73.6 136 33.8
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 2.8e-11 73.6 183 28.4
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 3.7e-11 73.2 131 33.6
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 3.7e-11 73.2 131 32.1
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 3.7e-11 73.2 131 32.8
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 3.7e-11 73.2 131 34.4
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 3.7e-11 73.2 119 34.5
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 3.7e-11 73.2 131 34.4
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 3.7e-11 73.2 193 28.5
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 4.8e-11 72.8 136 33.8
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 4.8e-11 72.8 169 30.8
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 6.2e-11 72.4 209 28.2
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 8.1e-11 72.0 199 31.2
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 8.1e-11 72.0 119 34.5
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 8.1e-11 72.0 184 28.8
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 8.1e-11 72.0 166 31.9
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 1.1e-10 71.6 136 33.1
unitig_746.g26565 Utricularia gibba HOM05D006248 ORTHO05D007896 1.1e-10 71.6 125 32.8
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 1.4e-10 71.2 182 29.1
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 1.8e-10 70.9 116 36.2
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 1.8e-10 70.9 119 32.8
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 2.4e-10 70.5 184 28.3
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 2.4e-10 70.5 116 33.6
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 2.4e-10 70.5 116 32.8
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 2.4e-10 70.5 119 31.9
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 3.1e-10 70.1 136 30.1
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 4.0e-10 69.7 193 26.4
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 4.0e-10 69.7 195 27.2
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 4.0e-10 69.7 136 30.1
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 4.0e-10 69.7 136 30.1
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 4.0e-10 69.7 116 36.2
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 4.0e-10 69.7 116 35.3
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 4.0e-10 69.7 131 32.8
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 5.3e-10 69.3 198 29.8
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 6.9e-10 68.9 193 27.5
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 9.0e-10 68.6 116 33.6
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 1.2e-09 68.2 193 26.9
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 1.5e-09 67.8 133 33.8
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.5e-09 67.8 119 32.8
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 2.0e-09 67.4 116 32.8
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 2.6e-09 67.0 183 27.9
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 2.6e-09 67.0 191 27.2
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 4.5e-09 66.2 200 27.5
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 9.9e-09 65.1 185 27.6
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 1.7e-08 64.3 116 31.9
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 2.2e-08 63.9 193 26.4
Cre09.g398289 Chlamydomonas reinhardtii HOM05D006248 ORTHO05D007896 3.8e-08 63.2 154 28.6


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