Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 5.8e-229 797.3 445 100.0
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 4.2e-62 243.0 502 36.7
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 2.2e-58 230.7 485 37.5
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 4.4e-51 206.5 475 35.2
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.4e-41 174.9 449 32.1
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 1.0e-36 158.7 118 66.1
SMO201G0051 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 6.4e-18 96.3 106 45.3
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 4.6e-16 90.1 136 36.0
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 1.7e-15 88.2 108 40.7
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.9e-14 84.7 134 36.6
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.6e-13 81.6 136 33.1
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.6e-13 81.6 108 41.7
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 2.1e-13 81.3 99 42.4
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.1e-13 81.3 110 40.9
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 3.6e-13 80.5 156 35.9
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.8e-12 78.2 119 37.0
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 1.8e-12 78.2 119 37.0
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.3e-12 77.8 108 40.7
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.3e-12 77.8 99 41.4
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 4.0e-12 77.0 113 36.3
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 5.2e-12 76.6 106 39.6
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 6.8e-12 76.3 103 37.9
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 6.8e-12 76.3 102 40.2
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.2e-11 75.5 99 43.4
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 2.6e-11 74.3 113 37.2
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 5.8e-11 73.2 98 40.8
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 5.8e-11 73.2 138 35.5
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 7.6e-11 72.8 100 35.0
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 9.9e-11 72.4 100 34.0
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 9.9e-11 72.4 117 36.8
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 1.3e-10 72.0 98 38.8
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.3e-10 72.0 136 35.3
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 1.7e-10 71.6 113 38.1
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 2.9e-10 70.9 106 34.0
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 3.7e-10 70.5 110 38.2
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 6.4e-10 69.7 109 39.4
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 8.4e-10 69.3 113 37.2
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 8.4e-10 69.3 101 34.7
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 8.4e-10 69.3 110 39.1
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 1.9e-09 68.2 107 35.5
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.4e-09 67.8 103 33.0
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 2.4e-09 67.8 112 36.6
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 3.2e-09 67.4 96 39.6
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 3.2e-09 67.4 119 35.3
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 4.1e-09 67.0 134 32.1
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.1e-09 67.0 134 32.1
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 4.1e-09 67.0 110 36.4
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 5.4e-09 66.6 101 35.6
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 5.4e-09 66.6 155 27.7
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 7.1e-09 66.2 97 40.2
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 7.1e-09 66.2 115 32.2
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 9.2e-09 65.9 100 37.0
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 1.2e-08 65.5 109 37.6
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.6e-08 65.1 134 31.3
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 2.1e-08 64.7 101 34.7
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.7e-08 64.3 110 35.5
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 6.0e-08 63.2 127 32.3
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.8e-08 62.8 134 32.1
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.7e-07 61.6 60 53.3
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 2.3e-07 61.2 66 50.0
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 2.3e-07 61.2 131 32.8
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 3.0e-07 60.8 92 35.9
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 3.9e-07 60.5 66 48.5
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 6.6e-07 59.7 95 36.8
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 6.6e-07 59.7 106 33.0
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.5e-06 58.5 110 30.9
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.9e-06 58.2 110 30.9
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 3.3e-06 57.4 123 30.1
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 4.3e-06 57.0 108 34.3


User provided reference genes

Program Settings