Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 6.1e-177 624.0 307 100.0
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.4e-125 452.6 308 66.9
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.6e-124 448.4 305 67.5
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 2.9e-118 429.1 306 65.4
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.0e-75 287.7 314 48.1
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.3e-72 275.4 311 45.3
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 2.2e-70 270.0 311 45.7
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 1.8e-64 250.4 322 42.5
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 3.4e-63 246.1 174 68.4
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 7.4e-58 228.4 304 40.1
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 4.8e-57 225.7 304 40.5
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.4e-56 224.2 304 40.1
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.8e-56 223.8 305 38.7
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.4e-56 223.4 305 39.3
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 9.1e-56 221.5 305 38.4
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 9.1e-56 221.5 304 39.1
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 1.2e-55 221.1 305 38.0
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 1.2e-55 221.1 305 38.4
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.2e-55 221.1 303 38.6
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.0e-55 220.3 303 38.6
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 2.0e-55 220.3 303 38.9
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 2.0e-55 220.3 305 39.3
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.6e-55 219.9 304 38.8
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 2.6e-55 219.9 304 38.8
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 3.4e-55 219.5 305 37.0
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 3.4e-55 219.5 305 38.7
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 3.4e-55 219.5 305 38.7
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 4.5e-55 219.2 303 37.0
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 4.5e-55 219.2 303 38.9
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 7.7e-55 218.4 305 39.0
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 2.9e-54 216.5 307 37.8
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 2.9e-54 216.5 303 38.6
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 3.8e-54 216.1 305 36.7
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 5.0e-54 215.7 305 38.4
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 6.5e-54 215.3 304 37.5
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.4e-53 214.2 305 38.4
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 2.5e-53 213.4 304 38.2
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 3.2e-53 213.0 305 37.4
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 3.2e-53 213.0 303 38.0
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 3.2e-53 213.0 305 37.0
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 4.2e-53 212.6 303 38.0
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 4.2e-53 212.6 304 38.2
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 4.2e-53 212.6 303 37.6
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 5.5e-53 212.2 301 38.5
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 5.5e-53 212.2 304 38.5
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 5.5e-53 212.2 305 37.7
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.6e-52 210.7 305 36.4
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.6e-52 210.7 301 36.5
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 2.7e-52 209.9 303 36.3
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 3.6e-52 209.5 303 36.6
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 6.1e-52 208.8 303 37.3
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 6.1e-52 208.8 305 36.7
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 7.9e-52 208.4 305 36.1
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.8e-51 207.2 308 38.6
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 3.0e-51 206.5 303 36.0
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 3.9e-51 206.1 303 37.0
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.3e-50 203.0 304 36.8
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 4.4e-50 202.6 305 35.4
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 7.4e-50 201.8 264 39.0
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.3e-49 201.1 309 36.9
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 2.8e-49 199.9 308 36.0
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 2.8e-49 199.9 302 36.8
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 6.3e-49 198.7 311 36.3
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.8e-48 197.2 264 40.9
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.8e-48 197.2 273 39.2
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.8e-48 197.2 303 36.6
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 4.1e-48 196.1 302 36.1
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 9.1e-48 194.9 306 37.3
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 9.1e-48 194.9 303 36.3
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.6e-47 193.4 324 37.0
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 2.6e-47 193.4 309 36.6
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 4.5e-47 192.6 276 36.6
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 5.9e-47 192.2 264 40.5
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.2e-46 190.3 309 34.0
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 6.5e-46 188.7 278 37.4
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.1e-45 188.0 256 40.2
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 5.5e-45 185.7 266 39.1
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 7.2e-45 185.3 254 39.4
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.6e-44 184.1 250 40.4
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 2.3e-43 180.3 306 34.0
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 6.7e-43 178.7 251 38.6
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 4.8e-41 172.6 421 28.5
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 8.2e-41 171.8 238 38.2
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 3.5e-39 166.4 289 33.2
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.6e-36 157.5 392 28.8
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 4.0e-35 152.9 199 40.7
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.5e-34 151.0 300 32.7
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 2.7e-31 140.2 183 41.5
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.9e-30 136.7 170 42.4
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 5.0e-30 136.0 185 38.9
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 6.5e-30 135.6 299 29.4
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.1e-29 134.8 207 40.1
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 8.8e-27 125.2 240 32.1
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 2.2e-25 120.6 171 38.0
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 6.3e-25 119.0 165 40.6
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 8.3e-25 118.6 302 29.1
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 2.7e-23 113.6 167 38.9
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 5.2e-19 99.4 140 37.9
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.5e-18 97.8 160 35.6
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.5e-18 97.8 158 36.1
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 8.3e-17 92.0 193 32.1
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.3e-14 84.7 240 27.5
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 6.6e-14 82.4 77 46.8
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 1.0e-11 75.1 131 36.6
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 3.1e-11 73.6 234 25.6
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 3.4e-10 70.1 230 25.7
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 4.4e-10 69.7 245 23.7
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 7.5e-10 68.9 80 37.5
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.3e-09 68.2 270 25.9
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 4.9e-09 66.2 91 36.3
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 8.3e-09 65.5 256 25.0
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 8.3e-09 65.5 186 26.3
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 4.1e-08 63.2 135 31.1
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 7.0e-08 62.4 142 31.7
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.2e-07 61.6 97 39.2
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.7e-07 60.5 77 37.7
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 5.0e-06 56.2 140 32.1


User provided reference genes

Program Settings