Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 1.4e-145 520.0 338 100.0
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 1.1e-59 234.6 339 58.1
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 5.7e-59 232.3 340 41.5
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 1.4e-57 227.6 339 50.7
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 4.5e-56 222.6 338 59.2
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 2.9e-55 219.9 339 49.0
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 2.9e-55 219.9 340 56.2
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 1.1e-54 218.0 329 40.4
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 1.4e-54 217.6 339 54.3
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 7.2e-54 215.3 339 46.6
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 9.3e-54 214.9 339 50.1
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 9.3e-54 214.9 340 49.4
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 1.2e-53 214.5 340 55.0
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.2e-53 214.5 339 54.6
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 1.0e-52 211.5 339 54.3
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 3.0e-52 209.9 339 54.3
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 3.9e-52 209.5 339 53.7
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 5.1e-52 209.1 332 55.7
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 6.7e-52 208.8 339 58.7
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 6.7e-52 208.8 339 54.0
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 8.7e-52 208.4 345 53.9
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 3.3e-51 206.5 339 54.0
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 7.4e-51 205.3 339 57.5
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 2.2e-50 203.8 339 46.9
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 2.8e-50 203.4 336 54.5
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 3.7e-50 203.0 340 41.2
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 3.7e-50 203.0 339 53.4
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 4.8e-50 202.6 342 45.0
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 1.1e-49 201.4 339 49.6
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 1.8e-49 200.7 339 58.1
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 4.1e-49 199.5 296 51.7
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 9.1e-49 198.4 339 41.6
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 1.2e-48 198.0 341 42.5
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 1.2e-48 198.0 339 47.5
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 1.5e-48 197.6 339 52.5
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 2.6e-48 196.8 339 55.8
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 3.4e-48 196.4 346 54.0
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 1.3e-47 194.5 338 51.8
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 2.5e-46 190.3 339 50.4
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 3.2e-46 189.9 341 53.1
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 1.6e-45 187.6 359 52.1
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 1.6e-45 187.6 341 50.7
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 7.9e-45 185.3 340 50.6
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.0e-44 184.9 338 51.8
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 5.1e-44 182.6 339 49.0
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 8.8e-44 181.8 339 51.0
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 1.5e-43 181.0 339 52.2
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 3.3e-43 179.9 349 54.2
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 2.2e-42 177.2 296 59.5
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 2.2e-42 177.2 276 51.1
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 1.4e-41 174.5 339 50.1
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 3.1e-41 173.3 370 48.9
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 1.5e-40 171.0 334 50.6
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 2.0e-40 170.6 382 33.8
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 2.0e-40 170.6 382 33.8
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 7.7e-40 168.7 343 49.6
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 2.2e-39 167.2 340 50.3
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.9e-39 166.8 317 56.5
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 8.5e-39 165.2 343 52.2
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 1.4e-38 164.5 340 49.1
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.4e-38 164.5 317 43.8
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 3.2e-38 163.3 341 52.2
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 3.2e-38 163.3 340 42.1
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 4.2e-38 162.9 339 47.5
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 5.5e-38 162.5 299 57.2
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 7.2e-38 162.2 340 49.7
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 1.6e-37 161.0 340 48.2
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 3.0e-36 156.8 277 49.1
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 3.0e-36 156.8 339 38.9
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 5.2e-36 156.0 340 48.5
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 6.7e-36 155.6 270 57.0
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 6.7e-36 155.6 276 59.1
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 8.8e-36 155.2 340 48.5
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.1e-35 154.8 280 44.6
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 2.6e-35 153.7 340 47.9
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 5.7e-35 152.5 321 33.0
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 9.7e-35 151.8 345 50.7
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 9.7e-35 151.8 350 31.7
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 1.7e-34 151.0 339 47.5
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 2.2e-34 150.6 276 58.3
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 3.7e-34 149.8 272 54.0
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 2.4e-33 147.1 336 47.9
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 3.5e-32 143.3 341 36.7
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 2.2e-31 140.6 271 53.1
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 2.9e-31 140.2 340 47.4
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 2.9e-31 140.2 337 47.2
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 2.9e-31 140.2 342 46.8
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 3.8e-31 139.8 341 51.0
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 3.8e-31 139.8 341 51.0
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 1.9e-30 137.5 300 42.0
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 9.4e-30 135.2 278 50.0
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 4.7e-29 132.9 336 31.0
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 4.0e-28 129.8 341 45.7
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 6.7e-28 129.0 318 36.5
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 4.8e-26 122.9 394 29.7
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 2.0e-24 117.5 134 44.8
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 1.0e-23 115.2 287 40.1
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 1.0e-23 115.2 278 40.6
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 3.6e-21 106.7 298 49.0
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 3.6e-21 106.7 134 44.8
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 4.7e-21 106.3 135 44.4
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 2.3e-20 104.0 131 52.7
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 2.6e-19 100.5 133 40.6
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 6.3e-18 95.9 345 27.0
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 8.3e-18 95.5 394 38.1
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.8e-17 94.4 406 26.4
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 7.0e-17 92.4 145 44.1
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 7.0e-17 92.4 145 44.1
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 2.3e-15 87.4 135 37.8
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 6.5e-15 85.9 84 51.2
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 5.5e-14 82.8 127 50.4
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 9.5e-14 82.0 145 38.6
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 3.6e-13 80.1 270 43.0


User provided reference genes

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