Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0502 Selaginella moellendorffii HOM05D013579 ORTHO05D003690 1.9e-133 479.2 238 100.0
SMO146G0238 Selaginella moellendorffii HOM05D003316 ORTHO05D003690 4.9e-17 92.4 266 28.6
Mapoly0029s0076 Marchantia polymorpha HOM05D013579 ORTHO05D015305 6.9e-11 72.0 115 40.9
Pp3c14_19700 Physcomitrium patens HOM05D013579 ORTHO05D015305 1.5e-10 70.9 374 24.9
Pp3c16_12300 Physcomitrium patens HOM05D013579 ORTHO05D001508 4.5e-10 69.3 172 31.4
MBI02_g21020_MAGBIO Magnolia biondii HOM05D003316 ORTHO05D003690 1.0e-09 68.2 174 31.6
Pp3c6_24870 Physcomitrium patens HOM05D013579 ORTHO05D015305 1.3e-09 67.8 125 34.4
BraA07t31937Z Brassica rapa HOM05D003316 ORTHO05D003690 1.7e-09 67.4 185 31.4
GSVIVG01036804001 Vitis vinifera HOM05D003316 ORTHO05D003690 1.7e-09 67.4 154 31.2
Cc05_g16270 Coffea canephora HOM05D003316 ORTHO05D003690 2.2e-09 67.0 184 31.5
Haze_07827 Corylus avellana HOM05D003316 ORTHO05D003690 2.2e-09 67.0 200 30.0
A07p44280 Brassica napus HOM05D003316 ORTHO05D003690 2.9e-09 66.6 185 31.4
Pp3c17_15140 Physcomitrium patens HOM05D013579 ORTHO05D015305 2.9e-09 66.6 128 33.6
TAR636G2183 Trochodendron aralioides HOM05D001667 ORTHO05D001508 3.8e-09 66.2 171 32.2
BraA09t41461Z Brassica rapa HOM05D003316 ORTHO05D003690 4.9e-09 65.9 190 32.6
TWI38G0778 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 4.9e-09 65.9 184 31.0
A09p60880 Brassica napus HOM05D003316 ORTHO05D003690 6.4e-09 65.5 190 32.6
Migut.H01676 Erythranthe guttata HOM05D003316 ORTHO05D003690 6.4e-09 65.5 204 28.9
MSTRG.7073 Avicennia marina HOM05D003316 ORTHO05D003690 1.1e-08 64.7 224 29.9
BcaC08g47478 Brassica carinata HOM05D003316 ORTHO05D003690 1.1e-08 64.7 194 29.9
C06p53030 Brassica napus HOM05D003316 ORTHO05D003690 1.1e-08 64.7 194 29.9
Pp3c27_4970 Physcomitrium patens HOM05D013579 ORTHO05D004077 1.1e-08 64.7 220 30.5
TAR633G2309 Trochodendron aralioides HOM05D001667 ORTHO05D001508 1.4e-08 64.3 174 29.9
CDE06G2584 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.9e-08 63.9 160 30.6
Nn2g14254 Nelumbo nucifera HOM05D001590 ORTHO05D001508 1.9e-08 63.9 177 29.4
Nn7g37833 Nelumbo nucifera HOM05D003316 ORTHO05D003690 1.9e-08 63.9 176 34.1
QL04p080175 Quercus lobata HOM05D003316 ORTHO05D003690 1.9e-08 63.9 185 32.4
unitig_32.g11082 Utricularia gibba HOM05D003316 ORTHO05D003690 1.9e-08 63.9 250 28.4
CiPaw.11G063000 Carya illinoinensis HOM05D003316 ORTHO05D003690 2.5e-08 63.5 188 29.8
Pp3c5_5250 Physcomitrium patens HOM05D013579 ORTHO05D015305 2.5e-08 63.5 394 23.9
QL04p080199 Quercus lobata HOM05D003316 ORTHO05D003690 2.5e-08 63.5 175 29.1
Hund12435 Selenicereus undatus HOM05D003316 ORTHO05D003690 2.5e-08 63.5 211 29.9
GSVIVG01038001001 Vitis vinifera HOM05D003316 ORTHO05D003690 2.5e-08 63.5 174 32.2
Eucgr.F04447 Eucalyptus grandis HOM05D003316 ORTHO05D003690 3.2e-08 63.2 191 27.7
Nitab4.5_0000747g0040 Nicotiana tabacum HOM05D003316 ORTHO05D003690 3.2e-08 63.2 192 28.6
SEGI_03464 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 3.2e-08 63.2 229 27.1
Nn6g34775 Nelumbo nucifera HOM05D001667 ORTHO05D001508 4.2e-08 62.8 179 29.1
DCAR_013730 Daucus carota HOM05D003316 ORTHO05D003690 5.5e-08 62.4 175 30.9
CARHR072810 Cardamine hirsuta HOM05D003316 ORTHO05D003690 7.1e-08 62.0 186 28.5
SEGI_20858 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 7.1e-08 62.0 185 29.7
unitig_747.g21116 Utricularia gibba HOM05D003968 ORTHO05D004077 7.1e-08 62.0 171 26.9
Atru.chr1.123 Acer truncatum HOM05D003316 ORTHO05D003690 9.3e-08 61.6 189 28.6
ATR0763G052 Amborella trichopoda HOM05D003316 ORTHO05D003690 9.3e-08 61.6 185 29.2
Nn5g30117 Nelumbo nucifera HOM05D002704 ORTHO05D002891 9.3e-08 61.6 187 31.0
Phvul.005G051100 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 9.3e-08 61.6 198 26.8
PGR004G2379 Punica granatum HOM05D001667 ORTHO05D001508 9.3e-08 61.6 166 32.5
Rhsim06G0241400 Rhododendron simsii HOM05D003316 ORTHO05D003690 9.3e-08 61.6 181 30.4
CSS0004609 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 1.2e-07 61.2 193 29.5
Cfa022970 Carpinus fangiana HOM05D003316 ORTHO05D003690 1.6e-07 60.8 200 29.5
DCAR_009174 Daucus carota HOM05D001667 ORTHO05D001508 1.6e-07 60.8 94 38.3
Migut.M01536 Erythranthe guttata HOM05D003316 ORTHO05D003690 1.6e-07 60.8 175 30.9
Glyma.15G259100 Glycine max HOM05D003316 ORTHO05D003690 1.6e-07 60.8 203 26.6
Sed0022394 Sechium edule HOM05D003316 ORTHO05D003690 1.6e-07 60.8 177 33.3
VMungo1080G0561 Vigna mungo HOM05D003316 ORTHO05D003690 1.6e-07 60.8 198 26.8
Eucgr.F01471 Eucalyptus grandis HOM05D003316 ORTHO05D003690 2.1e-07 60.5 264 28.4
TAR627G0616 Trochodendron aralioides HOM05D003316 ORTHO05D003690 2.1e-07 60.5 174 27.6
BolC6t40320H Brassica oleracea HOM05D003316 ORTHO05D003690 2.7e-07 60.1 195 30.3
Gohir.D01G081200 Gossypium hirsutum HOM05D003316 ORTHO05D003690 2.7e-07 60.1 209 25.8
Gorai.002G106100 Gossypium raimondii HOM05D003316 ORTHO05D003690 2.7e-07 60.1 209 26.8
BolC8t51988H Brassica oleracea HOM05D003316 ORTHO05D003690 3.5e-07 59.7 187 29.9
Nitab4.5_0003929g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 3.5e-07 59.7 192 27.6
PSO447G0371 Papaver somniferum HOM05D002704 ORTHO05D002891 3.5e-07 59.7 160 33.1
PGR031G2416 Punica granatum HOM05D003316 ORTHO05D003690 3.5e-07 59.7 178 29.8
CDE02G3419 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 4.6e-07 59.3 160 28.8
MD05G1223700 Malus domestica HOM05D003316 ORTHO05D003690 4.6e-07 59.3 219 26.5
C08p44470 Brassica napus HOM05D003316 ORTHO05D003690 6.0e-07 58.9 197 29.9
CSS0025565 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 6.0e-07 58.9 174 31.0
Gohir.A01G096900 Gossypium hirsutum HOM05D003316 ORTHO05D003690 6.0e-07 58.9 200 26.5
MBI01_g34424_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 6.0e-07 58.9 175 32.6
PSO210G1059 Papaver somniferum HOM05D002704 ORTHO05D002891 6.0e-07 58.9 158 32.9
SalBow8G1536 Salvia bowleyana HOM05D003316 ORTHO05D003690 6.0e-07 58.9 213 27.7
Sopen07g034730 Solanum pennellii HOM05D003316 ORTHO05D003690 6.0e-07 58.9 209 28.7
THA.LOC104813611 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 6.0e-07 58.9 196 27.6
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 7.9e-07 58.5 172 30.8
ClCG09G022660 Citrullus lanatus HOM05D003316 ORTHO05D003690 7.9e-07 58.5 192 29.7
Dinv42487 Davidia involucrata HOM05D003316 ORTHO05D003690 7.9e-07 58.5 190 28.4
unitig_37.g12202 Utricularia gibba HOM05D003316 ORTHO05D003690 7.9e-07 58.5 167 29.9
Carub.0001s1625 Capsella rubella HOM05D003316 ORTHO05D003690 1.0e-06 58.2 182 27.5
Lalb_Chr03g0031631 Lupinus albus HOM05D003316 ORTHO05D003690 1.0e-06 58.2 191 28.3
Actinidia35424 Actinidia chinensis HOM05D003316 ORTHO05D003690 1.3e-06 57.8 195 26.7
Dinv14325 Davidia involucrata HOM05D002704 ORTHO05D002891 1.3e-06 57.8 213 29.1
Dinv19599 Davidia involucrata HOM05D003316 ORTHO05D003690 1.3e-06 57.8 194 30.4
Lj1A910T5 Lonicera japonica HOM05D003316 ORTHO05D003690 1.3e-06 57.8 182 28.0
SEGI_23541 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 1.3e-06 57.8 217 28.1
Solyc07g066570.4 Solanum lycopersicum HOM05D003316 ORTHO05D003690 1.3e-06 57.8 207 26.6
AT1G79160 Arabidopsis thaliana HOM05D003316 ORTHO05D003690 1.8e-06 57.4 186 30.6
Gohir.A04G060300 Gossypium hirsutum HOM05D001667 ORTHO05D001508 1.8e-06 57.4 85 37.6
Peaxi162Scf00041g00165 Petunia axillaris HOM05D002704 ORTHO05D002891 1.8e-06 57.4 186 28.5
Sed0011738 Sechium edule HOM05D003316 ORTHO05D003690 1.8e-06 57.4 182 28.6
HPP92_019307 Vanilla planifolia HOM05D002704 ORTHO05D002891 1.8e-06 57.4 172 26.7
Lalb_Chr01g0015851 Lupinus albus HOM05D003316 ORTHO05D003690 2.3e-06 57.0 212 25.0
Medtr2g066700 Medicago truncatula HOM05D003316 ORTHO05D003690 2.3e-06 57.0 197 27.9
Nitab4.5_0008429g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 2.3e-06 57.0 214 25.2
Gorai.013G141800 Gossypium raimondii HOM05D003316 ORTHO05D003690 3.0e-06 56.6 183 27.9
Mapoly0029s0070 Marchantia polymorpha HOM05D018002 ORTHO05D015305 3.0e-06 56.6 287 26.5
Prupe.7G099000 Prunus persica HOM05D001667 ORTHO05D001508 3.0e-06 56.6 92 39.1
vmacro11707 Vaccinium macrocarpon HOM05D003316 ORTHO05D003690 3.0e-06 56.6 193 26.4
ECA236G2699 Erigeron canadensis HOM05D003316 ORTHO05D003690 3.9e-06 56.2 172 29.1
Sp5g34220 Schrenkiella parvula HOM05D003316 ORTHO05D003690 3.9e-06 56.2 203 28.6
SGA_v2.0_scaffold239G44036 Striga asiatica HOM05D003316 ORTHO05D003690 3.9e-06 56.2 215 27.9
EL10Ac8g18492 Beta vulgaris HOM05D003316 ORTHO05D003690 5.1e-06 55.8 222 27.0
CARHR016970 Cardamine hirsuta HOM05D003316 ORTHO05D003690 5.1e-06 55.8 221 26.7
MELO3C012614.2 Cucumis melo HOM05D003316 ORTHO05D003690 5.1e-06 55.8 227 26.4
Lalb_Chr01g0007091 Lupinus albus HOM05D003316 ORTHO05D003690 5.1e-06 55.8 189 28.0
SalBow2G1659 Salvia bowleyana HOM05D003968 ORTHO05D004077 5.1e-06 55.8 177 28.2
TWI38G1355 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 5.1e-06 55.8 209 27.8
AUR62027750 Chenopodium quinoa HOM05D002704 ORTHO05D002891 6.7e-06 55.5 161 29.2
Lalb_Chr01g0017921 Lupinus albus HOM05D001667 ORTHO05D001508 6.7e-06 55.5 94 34.0
PGSC0003DMG400006402 Solanum tuberosum HOM05D002704 ORTHO05D002891 6.7e-06 55.5 164 30.5
Gohir.A13G122600 Gossypium hirsutum HOM05D003316 ORTHO05D003690 8.7e-06 55.1 188 29.3
Peaxi162Scf00452g00411 Petunia axillaris HOM05D003316 ORTHO05D003690 8.7e-06 55.1 191 26.7
Sabra06G0158900 Salix brachista HOM05D001667 ORTHO05D001508 8.7e-06 55.1 102 40.2
PGSC0003DMG400022120 Solanum tuberosum HOM05D003316 ORTHO05D003690 8.7e-06 55.1 216 25.0


User provided reference genes

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