Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 1.7e-304 1048.5 533 100.0
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.3e-174 617.1 483 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 1.4e-173 613.6 441 72.6
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 7.8e-172 607.8 438 69.6
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 7.6e-167 591.3 431 69.4
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 6.5e-134 481.9 445 57.3
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 8.4e-134 481.5 464 55.6
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 5.1e-131 472.2 433 59.4
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 2.2e-129 466.8 444 55.6
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 2.8e-129 466.5 464 54.5
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 4.1e-128 462.6 426 56.8
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 5.3e-128 462.2 472 54.2
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 2.0e-127 460.3 434 55.8
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 3.4e-127 459.5 469 54.6
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 2.5e-125 453.4 463 54.6
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 3.6e-124 449.5 434 55.3
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 1.8e-123 447.2 473 53.3
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 1.1e-122 444.5 443 53.3
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 2.0e-122 443.7 439 54.7
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 3.3e-122 443.0 463 52.9
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 3.3e-122 443.0 444 52.9
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 4.8e-121 439.1 429 55.7
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 1.8e-120 437.2 429 53.6
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.8e-120 437.2 444 52.7
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 3.1e-120 436.4 423 54.8
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 1.5e-119 434.1 433 53.3
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 4.5e-119 432.6 454 52.2
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 1.0e-118 431.4 430 55.1
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 1.3e-118 431.0 440 53.0
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 5.0e-118 429.1 443 51.7
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 1.1e-117 427.9 456 51.1
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 1.9e-117 427.2 445 51.2
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 5.5e-117 425.6 458 51.3
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 2.3e-115 420.2 454 52.2
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 4.8e-113 412.5 426 53.8
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 8.5e-110 401.7 458 50.4
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 4.7e-108 396.0 431 51.5
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 3.9e-107 392.9 294 68.4
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 1.6e-103 380.9 447 48.8
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 2.2e-102 377.1 385 52.5
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 1.1e-101 374.8 387 52.5
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 2.3e-91 340.5 359 50.4
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 1.6e-84 317.8 343 52.8
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 3.2e-72 276.9 423 40.7
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 2.7e-71 273.9 254 57.5
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 5.1e-62 243.0 343 45.8
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 1.9e-56 224.6 201 59.2
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 1.9e-53 214.5 146 74.7
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 1.6e-52 211.5 258 43.8
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 1.6e-44 184.9 233 48.1
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 5.8e-42 176.4 185 51.4
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 4.6e-39 166.8 138 58.7
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 6.0e-39 166.4 220 46.4
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 2.0e-34 151.4 147 52.4
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 7.1e-32 142.9 156 49.4
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.6e-31 141.7 156 48.1
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 8.1e-28 129.4 171 45.0
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.4e-19 102.1 276 32.2
Ca_29048_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 7.9e-15 86.3 100 44.0
SEGI_40959 Sequoiadendron giganteum HOM05D008293 ORTHO05D386060 9.7e-13 79.3 61 62.3
Sopen06g001050 Solanum pennellii HOM05D008293 ORTHO05D023155 1.8e-06 58.5 67 46.3


User provided reference genes

Program Settings