Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 4.8e-293 1010.4 489 100.0
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 5.6e-132 475.3 545 46.8
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 2.8e-131 473.0 513 48.5
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 1.4e-130 470.7 529 48.0
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 4.0e-130 469.2 515 47.8
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 1.5e-129 467.2 516 48.1
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 1.5e-129 467.2 530 47.2
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 2.6e-129 466.5 529 48.6
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 7.5e-129 464.9 537 47.9
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 7.5e-129 464.9 538 47.2
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 2.2e-128 463.4 516 48.1
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.2e-128 463.4 538 47.2
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 2.2e-128 463.4 517 48.4
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 2.9e-128 463.0 530 47.4
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 4.9e-128 462.2 538 47.0
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 8.3e-128 461.5 539 46.9
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 1.1e-127 461.1 527 45.9
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.2e-127 459.5 538 46.5
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 5.4e-127 458.8 509 47.5
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 7.0e-127 458.4 505 47.7
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 9.2e-127 458.0 528 46.6
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 1.2e-126 457.6 518 48.5
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 2.0e-126 456.8 543 46.4
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 2.0e-126 456.8 526 45.6
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 3.5e-126 456.1 501 48.5
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 5.9e-126 455.3 535 45.8
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.9e-126 455.3 559 45.1
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 7.8e-126 454.9 538 44.6
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 7.8e-126 454.9 532 46.4
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 1.0e-125 454.5 551 44.3
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.3e-125 454.1 530 45.7
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 1.7e-125 453.8 535 46.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.7e-125 453.8 541 44.4
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 2.3e-125 453.4 544 45.2
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 3.9e-125 452.6 538 45.4
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 5.0e-125 452.2 537 45.3
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 6.6e-125 451.8 532 45.9
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 6.6e-125 451.8 529 46.5
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 8.6e-125 451.4 532 44.7
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 8.6e-125 451.4 522 46.6
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 1.1e-124 451.1 529 46.5
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 1.5e-124 450.7 517 47.4
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 1.9e-124 450.3 535 44.9
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 1.9e-124 450.3 528 46.6
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 3.3e-124 449.5 527 46.1
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 4.3e-124 449.1 539 46.0
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 5.6e-124 448.7 532 45.3
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.2e-123 447.6 504 47.8
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 1.6e-123 447.2 535 45.0
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.6e-123 447.2 528 46.6
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 3.6e-123 446.0 534 44.9
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 3.6e-123 446.0 530 45.3
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 1.4e-122 444.1 542 43.7
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 1.8e-122 443.7 511 47.4
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 2.3e-122 443.4 529 46.3
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 3.1e-122 443.0 596 42.4
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 4.0e-122 442.6 518 47.9
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 6.8e-122 441.8 550 44.7
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 4.4e-121 439.1 566 42.6
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 4.4e-121 439.1 528 45.6
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 4.9e-120 435.6 526 46.0
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 1.1e-119 434.5 532 45.9
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 3.2e-119 433.0 517 47.0
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 4.1e-119 432.6 479 48.0
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 1.0e-117 427.9 535 44.3
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 3.0e-117 426.4 471 48.6
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 5.0e-117 425.6 533 45.4
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 6.6e-117 425.2 492 46.1
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 3.3e-116 422.9 524 43.7
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 9.5e-116 421.4 492 45.7
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 1.6e-115 420.6 481 47.4
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 4.7e-115 419.1 529 43.5
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 6.2e-115 418.7 512 44.7
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.1e-114 417.9 520 45.6
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 1.8e-114 417.2 451 47.9
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 4.0e-114 416.0 466 47.2
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 2.6e-113 413.3 646 38.9
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 3.4e-113 412.9 470 48.5
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 1.7e-112 410.6 502 43.8
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.9e-111 407.1 463 46.4
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 9.2e-111 404.8 615 38.7
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 9.5e-108 394.8 556 41.4
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 6.2e-107 392.1 382 51.6
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 7.6e-105 385.2 410 49.3
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 6.0e-102 375.6 608 39.5
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.7e-101 374.0 315 57.5
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 2.3e-101 373.6 379 49.9
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 3.0e-101 373.2 307 57.7
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 6.4e-88 328.9 464 41.6
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 1.4e-87 327.8 439 43.1
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 2.4e-87 327.0 439 42.8
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 7.1e-87 325.5 458 40.4
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 9.3e-87 325.1 438 41.8
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.9e-84 317.4 401 43.9
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 4.9e-80 302.8 424 42.0
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 2.1e-78 297.4 379 44.3
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 6.0e-78 295.8 410 41.2
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 7.9e-78 295.4 420 39.5
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 3.0e-77 293.5 261 55.9
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 1.5e-76 291.2 427 40.5
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 2.9e-72 276.9 404 37.6
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 4.9e-72 276.2 395 41.0
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 7.9e-70 268.9 444 37.6
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 1.3e-67 261.5 506 33.0
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 3.1e-66 256.9 375 39.7
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 5.9e-65 252.7 571 34.3
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 7.6e-65 252.3 497 34.6
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 2.5e-55 220.7 395 36.7
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 1.5e-49 201.4 209 47.4
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 5.9e-49 199.5 130 71.5
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 1.0e-48 198.7 124 71.0
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 6.1e-46 189.5 125 65.6
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 8.0e-38 162.5 410 32.2
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 2.3e-37 161.0 253 37.9
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 1.5e-36 158.3 142 52.1
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 5.7e-36 156.4 256 39.8
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 5.5e-31 139.8 87 73.6
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.8e-29 134.8 87 66.7
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 5.2e-29 133.3 91 67.0
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.1e-18 99.0 131 42.0
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 3.1e-18 97.4 138 38.4
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 1.0e-16 92.4 111 43.2
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.1e-15 89.0 104 45.2
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 9.8e-12 75.9 60 55.0


User provided reference genes

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