Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0170 Selaginella moellendorffii HOM05D043551 ORTHO05D050874 6.0e-235 817.4 494 100.0
SMO144G0067 Selaginella moellendorffii HOM05D043551 ORTHO05D050874 5.6e-132 475.3 412 74.0
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 1.0e-08 65.9 155 31.6
CiPaw.01G067300 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.3e-08 65.5 158 29.7
Sp6g29030 Schrenkiella parvula HOM05D000424 ORTHO05D000355 1.3e-08 65.5 136 25.0
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 6.6e-08 63.2 303 20.8
CiPaw.01G067100 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.1e-07 62.4 167 31.1
FAN01G0244 Fragaria x ananassa HOM05D006556 ORTHO05D008146 1.5e-07 62.0 176 25.6
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 2.5e-07 61.2 157 30.6
PGR044G1927 Punica granatum HOM05D000891 ORTHO05D011021 2.5e-07 61.2 168 26.2
CiPaw.01G067500 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.3e-07 60.8 153 30.1
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 5.6e-07 60.1 154 29.9
CiPaw.01G067400 Carya illinoinensis HOM05D003900 ORTHO05D005009 5.6e-07 60.1 122 33.6
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 5.6e-07 60.1 157 29.9
RcHm_v2.0_Chr1g0326571 Rosa chinensis HOM05D006556 ORTHO05D008146 5.6e-07 60.1 133 28.6
Lsat_1_v5_gn_2_6800 Lactuca sativa HOM05D000424 ORTHO05D000355 7.3e-07 59.7 113 27.4
arahy.Tifrunner.gnm1.ann1.58SQTR Arachis hypogaea HOM05D004271 ORTHO05D006011 1.3e-06 58.9 331 21.5
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 1.3e-06 58.9 335 22.4
SEGI_06910 Sequoiadendron giganteum HOM05D004670 ORTHO05D008020 1.6e-06 58.5 135 24.4
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 2.1e-06 58.2 228 22.4
Gohir.A02G110000 Gossypium hirsutum HOM05D000424 ORTHO05D000355 2.1e-06 58.2 93 29.0
AagrBONN_evm.TU.Sc2ySwM_117.1478 Anthoceros agrestis HOM05D005833 ORTHO05D008135 2.8e-06 57.8 147 34.7
CiPaw.01G066600 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.8e-06 57.8 153 30.1
Phvul.009G215700 Phaseolus vulgaris HOM05D007173 ORTHO05D009151 2.8e-06 57.8 340 20.3
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 2.8e-06 57.8 160 28.8
Migut.B01798 Erythranthe guttata HOM05D003900 ORTHO05D005009 3.6e-06 57.4 162 29.6
CSS0003198 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 4.8e-06 57.0 95 25.3
CSS0012921 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 4.8e-06 57.0 95 25.3
CSS0015280 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 4.8e-06 57.0 95 25.3
Migut.N01200 Erythranthe guttata HOM05D006858 ORTHO05D008767 4.8e-06 57.0 100 27.0
Thecc.08G132000 Theobroma cacao HOM05D000424 ORTHO05D000355 4.8e-06 57.0 118 28.8
TWI12G1155 Tripterygium wilfordii HOM05D000424 ORTHO05D000355 4.8e-06 57.0 113 27.4
HPP92_026434 Vanilla planifolia HOM05D002453 ORTHO05D002107 4.8e-06 57.0 174 24.1
arahy.Tifrunner.gnm1.ann1.Q40RKA Arachis hypogaea HOM05D000424 ORTHO05D000355 6.2e-06 56.6 93 28.0
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 6.2e-06 56.6 295 20.0
Manes.04G002700 Manihot esculenta HOM05D000424 ORTHO05D000355 6.2e-06 56.6 85 31.8
MSTRG.27720 Avicennia marina HOM05D006858 ORTHO05D008767 8.1e-06 56.2 150 27.3
Dinv27276 Davidia involucrata HOM05D000424 ORTHO05D000355 8.1e-06 56.2 93 28.0
Gorai.013G109300 Gossypium raimondii HOM05D000424 ORTHO05D000355 8.1e-06 56.2 93 28.0
Oeu003964.1 Olea europaea HOM05D006556 ORTHO05D008146 8.1e-06 56.2 178 25.8


User provided reference genes

Program Settings