Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0090 Selaginella moellendorffii HOM05D046860 ORTHO05D000399 1.9e-110 402.5 199 100.0
SMO144G0056 Selaginella moellendorffii HOM05D046860 ORTHO05D000399 9.6e-99 363.6 210 89.5
PGR042G0299 Punica granatum HOM05D000262 ORTHO05D000300 3.0e-07 59.7 68 38.2
Hund26654 Selenicereus undatus HOM05D000262 ORTHO05D000300 3.0e-07 59.7 68 39.7
Eucgr.H00919 Eucalyptus grandis HOM05D000262 ORTHO05D000300 3.9e-07 59.3 68 39.7
PGR044G2647 Punica granatum HOM05D000262 ORTHO05D000300 3.9e-07 59.3 68 38.2
ClCG03G008940 Citrullus lanatus HOM05D000262 ORTHO05D000300 5.0e-07 58.9 68 38.2
MELO3C022804.2 Cucumis melo HOM05D000262 ORTHO05D000300 5.0e-07 58.9 68 38.2
CsaV3_5G023740 Cucumis sativus L. HOM05D000262 ORTHO05D000300 5.0e-07 58.9 68 38.2
Gohir.D04G025200 Gossypium hirsutum HOM05D000262 ORTHO05D000300 6.6e-07 58.5 83 34.9
Gorai.012G027800 Gossypium raimondii HOM05D000262 ORTHO05D000300 6.6e-07 58.5 83 34.9
Duzib116G0350 Durio zibethinus HOM05D000262 ORTHO05D000300 8.6e-07 58.2 68 36.8
Manes.18G070700 Manihot esculenta HOM05D000262 ORTHO05D000300 8.6e-07 58.2 68 38.2
RcHm_v2.0_Chr3g0493561 Rosa chinensis HOM05D000262 ORTHO05D000300 8.6e-07 58.2 68 39.7
Sed0004463 Sechium edule HOM05D000262 ORTHO05D000300 8.6e-07 58.2 68 36.8
THA.LOC104814252 Tarenaya hassleriana HOM05D000262 ORTHO05D000300 8.6e-07 58.2 74 37.8
Medtr6g026890 Medicago truncatula HOM05D000262 ORTHO05D000300 1.1e-06 57.8 89 32.6
Nitab4.5_0000643g0010 Nicotiana tabacum HOM05D000999 ORTHO05D000961 1.1e-06 57.8 76 44.7
Potri.002G092200 Populus trichocarpa HOM05D000262 ORTHO05D000300 1.1e-06 57.8 68 38.2
Solyc07g055010.3 Solanum lycopersicum HOM05D000262 ORTHO05D000300 1.1e-06 57.8 98 29.6
TWI53G1245 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 1.1e-06 57.8 77 36.4
unitig_8.g4831 Utricularia gibba HOM05D000262 ORTHO05D000300 1.1e-06 57.8 68 38.2
Sc26g0002300 Simmondsia chinensis HOM05D000262 ORTHO05D000300 1.5e-06 57.4 68 39.7
Cc02_g33120 Coffea canephora HOM05D000520 ORTHO05D000399 1.9e-06 57.0 78 32.1
MELO3C018725.2 Cucumis melo HOM05D000262 ORTHO05D000300 1.9e-06 57.0 88 34.1
Potri.005G167000 Populus trichocarpa HOM05D000262 ORTHO05D000300 1.9e-06 57.0 68 36.8
Sed0000143 Sechium edule HOM05D000262 ORTHO05D000300 1.9e-06 57.0 88 33.0
Aa31LG10G11750 Aethionema arabicum HOM05D000262 ORTHO05D000300 2.5e-06 56.6 69 39.1
Gohir.A05G391900 Gossypium hirsutum HOM05D000262 ORTHO05D000300 2.5e-06 56.6 83 34.9
Nitab4.5_0008047g0010 Nicotiana tabacum HOM05D000999 ORTHO05D000961 2.5e-06 56.6 92 39.1
Sabra05G0127100 Salix brachista HOM05D000262 ORTHO05D000300 2.5e-06 56.6 68 36.8
Hund17521 Selenicereus undatus HOM05D000262 ORTHO05D000300 2.5e-06 56.6 79 34.2
THA.LOC104806592 Tarenaya hassleriana HOM05D000999 ORTHO05D000961 2.5e-06 56.6 67 44.8
TWI56G0339 Tripterygium wilfordii HOM05D000262 ORTHO05D000300 2.5e-06 56.6 68 38.2
BraA02t04822Z Brassica rapa HOM05D002188 ORTHO05D002349 3.3e-06 56.2 83 33.7
CDE02G1894 Ceratophyllum demersum HOM05D000262 ORTHO05D000300 3.3e-06 56.2 70 35.7
Oeu043106.1 Olea europaea HOM05D000262 ORTHO05D000300 3.3e-06 56.2 72 37.5
Psat5g136400 Pisum sativum HOM05D000871 ORTHO05D000300 3.3e-06 56.2 80 35.0
Sc20g0004370 Simmondsia chinensis HOM05D000999 ORTHO05D000961 3.3e-06 56.2 85 40.0
Zm00001eb255100 Zea mays HOM05D000262 ORTHO05D000300 3.3e-06 56.2 71 40.8
C02p02020 Brassica napus HOM05D002188 ORTHO05D002349 4.3e-06 55.8 83 33.7
Cpa.g.sc3079.1 Carica papaya HOM05D000262 ORTHO05D000300 4.3e-06 55.8 65 35.4
Haze_14214 Corylus avellana HOM05D000262 ORTHO05D000300 4.3e-06 55.8 71 35.2
Medtr3g073670 Medicago truncatula HOM05D000262 ORTHO05D000300 4.3e-06 55.8 66 36.4
Aa31LG11G6450 Aethionema arabicum HOM05D000520 ORTHO05D000399 5.6e-06 55.5 67 37.3
BolC8t52655H Brassica oleracea HOM05D000262 ORTHO05D000300 5.6e-06 55.5 78 34.6
Ciclev10002768m.g Citrus clementina HOM05D000262 ORTHO05D000300 5.6e-06 55.5 65 38.5
Cc07_g11100 Coffea canephora HOM05D000262 ORTHO05D000300 5.6e-06 55.5 72 40.3
Duzib128G0013 Durio zibethinus HOM05D000262 ORTHO05D000300 5.6e-06 55.5 82 34.1
Eucgr.B02894 Eucalyptus grandis HOM05D000262 ORTHO05D000300 5.6e-06 55.5 68 36.8
MBI04_g07884_MAGBIO Magnolia biondii HOM05D000262 ORTHO05D000300 5.6e-06 55.5 71 35.2
PGR042G0567 Punica granatum HOM05D000262 ORTHO05D000300 5.6e-06 55.5 68 38.2
SEGI_16054 Sequoiadendron giganteum HOM05D000262 ORTHO05D000300 5.6e-06 55.5 61 42.6
SEGI_24445 Sequoiadendron giganteum HOM05D000262 ORTHO05D000300 5.6e-06 55.5 61 42.6
Atru.chr13.1273 Acer truncatum HOM05D000262 ORTHO05D000300 7.3e-06 55.1 68 35.3
BcaB03g14867 Brassica carinata HOM05D000262 ORTHO05D000300 7.3e-06 55.1 68 36.8
CSS0006162 Camellia sinensis var. sinensis HOM05D000262 ORTHO05D000300 7.3e-06 55.1 70 37.1
Eucgr.K01126 Eucalyptus grandis HOM05D000262 ORTHO05D000300 7.3e-06 55.1 87 31.0
Gohir.A01G186601 Gossypium hirsutum HOM05D000262 ORTHO05D000300 7.3e-06 55.1 68 35.3
Gohir.A01G186800 Gossypium hirsutum HOM05D000262 ORTHO05D000300 7.3e-06 55.1 68 35.3
Gorai.002G219600 Gossypium raimondii HOM05D000262 ORTHO05D000300 7.3e-06 55.1 68 35.3
Lalb_Chr11g0075231 Lupinus albus HOM05D000262 ORTHO05D000300 7.3e-06 55.1 68 36.8
Manes.08G099200 Manihot esculenta HOM05D000262 ORTHO05D000300 7.3e-06 55.1 82 34.1
Nn1g04406 Nelumbo nucifera HOM05D000262 ORTHO05D000300 7.3e-06 55.1 75 34.7
TWI36G0438 Tripterygium wilfordii HOM05D000262 ORTHO05D000300 7.3e-06 55.1 68 36.8
Actinidia15921 Actinidia chinensis HOM05D000262 ORTHO05D000300 9.5e-06 54.7 68 36.8
CANSAT25G3066 Cannabis sativa HOM05D000262 ORTHO05D000300 9.5e-06 54.7 66 34.8
Carub.0006s0429 Capsella rubella HOM05D000520 ORTHO05D000399 9.5e-06 54.7 68 33.8
Eucgr.G02703 Eucalyptus grandis HOM05D000262 ORTHO05D000399 9.5e-06 54.7 78 38.5
Gohir.D05G232200 Gossypium hirsutum HOM05D000262 ORTHO05D000300 9.5e-06 54.7 66 34.8
Gohir.D10G205400 Gossypium hirsutum HOM05D000262 ORTHO05D000399 9.5e-06 54.7 78 38.5
Gorai.009G240400 Gossypium raimondii HOM05D000262 ORTHO05D000300 9.5e-06 54.7 66 34.8
Lalb_Chr06g0165571 Lupinus albus HOM05D000262 ORTHO05D000300 9.5e-06 54.7 84 35.7
Manes.02G074200 Manihot esculenta HOM05D000262 ORTHO05D000300 9.5e-06 54.7 68 36.8
PSO541G0862 Papaver somniferum HOM05D000262 ORTHO05D000300 9.5e-06 54.7 68 39.7
QL12p035798 Quercus lobata HOM05D000262 ORTHO05D000300 9.5e-06 54.7 68 36.8
SGA_v2.0_scaffold24G10295 Striga asiatica HOM05D000262 ORTHO05D000300 9.5e-06 54.7 69 37.7
Thecc.08G113100 Theobroma cacao HOM05D000262 ORTHO05D000300 9.5e-06 54.7 91 33.0
TPR.G34612 Trifolium pratense HOM05D000262 ORTHO05D000300 9.5e-06 54.7 66 34.8
TAR636G0760 Trochodendron aralioides HOM05D000262 ORTHO05D000399 9.5e-06 54.7 72 36.1
GSVIVG01020704001 Vitis vinifera HOM05D000262 ORTHO05D000300 9.5e-06 54.7 89 30.3


User provided reference genes

Program Settings