Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 0.0e+00 1679.8 906 100.0
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 1.5e-61 242.3 819 28.8
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 4.4e-58 230.7 786 28.8
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 1.4e-56 225.7 681 28.5
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 1.7e-54 218.8 677 27.9
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 8.6e-54 216.5 741 28.3
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 7.3e-53 213.4 741 28.5
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 9.5e-53 213.0 685 27.4
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 2.1e-52 211.8 771 27.6
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 2.8e-52 211.5 737 28.9
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 1.5e-50 205.7 659 27.6
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 2.0e-50 205.3 916 26.7
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 2.6e-50 204.9 685 26.9
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 2.6e-50 204.9 704 27.4
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 4.4e-50 204.1 757 26.3
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 5.8e-50 203.8 685 28.0
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 1.7e-49 202.2 678 26.7
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 4.9e-49 200.7 710 27.0
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 1.4e-48 199.1 684 26.9
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 1.4e-48 199.1 677 27.0
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 1.9e-48 198.7 789 26.0
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 2.4e-48 198.4 770 25.3
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 5.4e-48 197.2 702 27.6
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 7.1e-48 196.8 687 26.3
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 1.2e-47 196.1 766 25.7
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 1.2e-47 196.1 681 26.7
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 2.7e-47 194.9 691 26.5
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 4.6e-47 194.1 803 26.7
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 6.0e-47 193.7 669 26.5
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 6.0e-47 193.7 708 26.7
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 6.0e-47 193.7 767 24.9
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 1.3e-46 192.6 675 27.6
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 1.3e-46 192.6 763 25.6
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 1.3e-46 192.6 682 27.7
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 1.7e-46 192.2 649 24.7
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 1.7e-46 192.2 762 24.9
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 1.7e-46 192.2 729 25.8
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 2.3e-46 191.8 741 26.3
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 3.0e-46 191.4 737 26.2
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 3.9e-46 191.0 785 25.1
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 5.1e-46 190.7 665 26.9
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 6.6e-46 190.3 677 26.0
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 6.6e-46 190.3 750 25.5
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 8.6e-46 189.9 791 26.5
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 1.1e-45 189.5 689 27.9
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 1.9e-45 188.7 790 26.7
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 3.3e-45 188.0 684 27.5
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 3.3e-45 188.0 661 27.1
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.3e-45 186.8 692 27.0
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 9.5e-45 186.4 732 26.2
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 9.5e-45 186.4 731 26.5
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 1.2e-44 186.0 666 27.9
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 1.2e-44 186.0 680 26.8
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.6e-44 185.7 674 26.6
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 2.1e-44 185.3 681 27.5
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 2.1e-44 185.3 747 26.1
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 2.1e-44 185.3 732 25.7
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 3.6e-44 184.5 674 26.1
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 4.7e-44 184.1 732 25.8
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.1e-43 183.0 674 26.6
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 1.1e-43 183.0 664 27.4
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 1.1e-43 183.0 795 24.9
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 1.4e-43 182.6 722 25.9
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 1.8e-43 182.2 682 26.0
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 5.2e-43 180.6 692 26.0
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 6.8e-43 180.3 682 26.4
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 8.9e-43 179.9 728 25.8
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 1.2e-42 179.5 747 25.8
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 1.5e-42 179.1 717 26.4
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 9.9e-42 176.4 783 25.7
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 1.3e-41 176.0 742 25.1
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 2.9e-41 174.9 753 23.5
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 3.8e-41 174.5 753 23.4
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 4.9e-41 174.1 680 26.6
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 6.4e-41 173.7 694 25.6
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 6.4e-41 173.7 726 26.2
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 1.1e-40 172.9 742 25.7
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 1.4e-40 172.6 751 24.6
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 1.9e-40 172.2 743 26.0
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 3.2e-40 171.4 738 25.2
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 3.2e-40 171.4 774 25.2
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 4.1e-40 171.0 717 24.5
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 1.2e-39 169.5 662 27.3
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 1.6e-39 169.1 705 25.8
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 2.1e-39 168.7 788 24.2
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 3.5e-39 167.9 751 24.2
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 7.8e-39 166.8 789 25.3
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 7.8e-39 166.8 760 23.9
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 3.0e-38 164.9 732 22.7
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 5.1e-38 164.1 744 23.7
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 6.6e-38 163.7 724 24.0
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 8.7e-38 163.3 776 25.5
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.5e-37 162.5 744 23.7
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 2.5e-37 161.8 772 24.1
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 5.6e-37 160.6 823 25.9
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 3.1e-35 154.8 614 26.5
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.6e-34 151.8 674 25.5
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 2.2e-33 148.7 696 25.1
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 2.9e-33 148.3 530 26.0
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 6.4e-33 147.1 427 27.2
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 5.6e-29 134.0 599 24.4
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 2.4e-24 118.6 745 23.9
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 9.3e-24 116.7 459 24.4
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 8.1e-20 103.6 431 26.0
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 4.5e-18 97.8 91 51.6
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 1.3e-17 96.3 873 23.0
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 6.0e-15 87.4 772 21.2
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 3.7e-12 78.2 307 25.7


User provided reference genes

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