Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 3.7e-277 957.6 486 100.0
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 3.9e-138 495.7 425 58.1
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 9.4e-132 474.6 427 55.5
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 2.7e-131 473.0 428 56.3
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 4.0e-130 469.2 433 54.0
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 1.2e-129 467.6 446 54.3
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 1.5e-129 467.2 444 52.9
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 1.5e-129 467.2 444 52.9
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 2.0e-129 466.8 433 55.4
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 2.6e-129 466.5 430 54.4
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 4.4e-129 465.7 436 55.0
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 4.4e-129 465.7 446 53.8
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 4.4e-129 465.7 429 55.5
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 5.7e-129 465.3 444 53.2
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 5.7e-129 465.3 444 53.2
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 5.7e-129 465.3 453 51.4
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 7.5e-129 464.9 427 55.3
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 7.5e-129 464.9 429 53.8
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 1.3e-128 464.2 444 55.4
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 2.8e-128 463.0 430 54.2
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 3.7e-128 462.6 427 54.3
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 4.8e-128 462.2 447 52.3
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 6.3e-128 461.8 433 54.3
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 1.1e-127 461.1 427 54.3
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 2.4e-127 459.9 433 53.3
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 3.1e-127 459.5 427 54.6
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 1.2e-126 457.6 427 52.9
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 1.2e-126 457.6 427 53.2
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 1.2e-126 457.6 446 53.1
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 1.6e-126 457.2 433 52.7
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 2.0e-126 456.8 444 51.8
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 2.0e-126 456.8 427 53.2
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 4.5e-126 455.7 444 52.0
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 5.9e-126 455.3 427 54.3
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 7.7e-126 454.9 444 52.5
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 1.0e-125 454.5 433 53.1
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 1.0e-125 454.5 431 54.3
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 1.0e-125 454.5 432 52.1
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 1.7e-125 453.8 428 52.3
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 3.8e-125 452.6 420 52.6
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 6.5e-125 451.8 432 52.5
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 6.5e-125 451.8 428 53.3
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 6.5e-125 451.8 448 51.3
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 8.5e-125 451.4 432 52.8
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 1.9e-124 450.3 447 50.8
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 2.5e-124 449.9 427 53.6
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 3.2e-124 449.5 435 52.9
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 3.2e-124 449.5 427 51.5
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 5.5e-124 448.7 458 50.7
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 5.5e-124 448.7 451 51.4
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 7.2e-124 448.4 431 53.1
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 7.2e-124 448.4 428 53.0
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 9.4e-124 448.0 427 52.7
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 9.4e-124 448.0 428 52.8
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 1.2e-123 447.6 427 52.9
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 1.6e-123 447.2 447 50.3
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 2.1e-123 446.8 433 52.4
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 2.7e-123 446.4 428 52.6
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 3.6e-123 446.0 451 51.2
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 2.3e-122 443.4 433 52.2
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 4.0e-122 442.6 426 52.3
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 8.8e-122 441.4 433 51.7
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 1.2e-121 441.0 426 51.9
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 1.2e-121 441.0 441 49.7
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 7.5e-121 438.3 430 52.8
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 1.7e-120 437.2 396 55.1
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 2.2e-120 436.8 448 49.1
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 1.1e-119 434.5 430 50.9
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 3.1e-119 433.0 429 52.0
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 3.1e-119 433.0 465 50.8
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 7.0e-119 431.8 426 51.6
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 2.7e-118 429.9 429 52.0
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 1.3e-117 427.6 429 51.3
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.0e-117 425.6 426 50.5
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.0e-117 425.6 426 50.5
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.0e-117 425.6 426 50.5
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 2.5e-116 423.3 411 52.1
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 1.2e-115 421.0 445 49.0
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 3.0e-114 416.4 372 54.8
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.7e-112 410.6 442 50.9
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 5.4e-111 405.6 412 51.9
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 5.0e-109 399.1 382 53.1
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 9.5e-108 394.8 439 48.1
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 4.0e-106 389.4 429 49.4
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 1.5e-105 387.5 475 44.4
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 2.9e-104 383.3 444 46.6
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 9.2e-103 378.3 550 42.4
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 1.7e-101 374.0 373 50.7
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 2.8e-99 366.7 420 46.9
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 8.9e-98 361.7 392 47.4
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 2.6e-97 360.1 292 61.3
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 2.4e-95 353.6 385 46.5
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 7.8e-94 348.6 445 43.6
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 1.1e-92 344.7 293 57.3
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 5.2e-90 335.9 311 54.3
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 2.5e-84 317.0 432 41.2
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 3.4e-81 306.6 393 44.5
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 4.4e-81 306.2 305 49.8
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 3.8e-80 303.1 429 40.8
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 8.7e-77 292.0 517 38.7
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 6.2e-75 285.8 432 39.4
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 1.4e-74 284.6 485 38.1
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 3.4e-73 280.0 295 49.5
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 1.3e-67 261.5 411 40.4
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.0e-61 240.4 339 42.2
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 1.4e-58 231.5 380 37.9
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 3.9e-53 213.4 251 45.8
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 5.1e-53 213.0 183 54.1
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 1.1e-47 195.3 236 45.8
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 2.5e-47 194.1 265 43.0
FAN01G1024 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.0e-40 169.9 159 52.2
DCAR_029492 Daucus carota HOM05D006213 ORTHO05D008107 1.2e-33 148.7 171 47.4
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 5.5e-31 139.8 157 47.8
FAN06G1264 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.7e-28 129.0 159 42.8
SHI13625 Sapria himalayana HOM05D006213 ORTHO05D008107 5.9e-17 93.2 147 38.1
Ca_14798_v3 Cicer arietinum L. HOM05D006213 ORTHO05D008107 3.8e-16 90.5 75 60.0
Psat4g223040 Pisum sativum HOM05D006213 ORTHO05D008107 3.6e-14 84.0 80 56.2
Psat5g245640 Pisum sativum HOM05D000300 ORTHO05D000383 2.3e-13 81.3 62 66.1
Cc02_g25230 Coffea canephora HOM05D006213 ORTHO05D008107 3.0e-13 80.9 117 41.0
FAN06G1132 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.3e-10 70.1 83 47.0
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 9.1e-10 69.3 277 25.3
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 2.0e-09 68.2 281 26.7
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 4.5e-09 67.0 309 25.2
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 5.9e-09 66.6 271 25.5
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 1.3e-08 65.5 266 25.6
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.7e-08 65.1 220 25.5
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.7e-08 65.1 220 25.5
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 2.2e-08 64.7 278 26.6
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 2.9e-08 64.3 275 23.6
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 3.8e-08 63.9 332 24.7
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 3.8e-08 63.9 321 24.9
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 3.8e-08 63.9 308 24.4
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 6.5e-08 63.2 219 25.1
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 6.5e-08 63.2 219 25.1
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 1.5e-07 62.0 254 24.4
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 1.9e-07 61.6 231 25.1
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 1.9e-07 61.6 272 22.8
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 2.5e-07 61.2 267 24.3
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 3.2e-07 60.8 318 25.2
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 4.2e-07 60.5 265 24.9
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 4.2e-07 60.5 276 22.8
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 5.5e-07 60.1 265 24.5
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 5.5e-07 60.1 276 22.8
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 7.2e-07 59.7 190 27.4
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 7.2e-07 59.7 283 23.7
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 9.4e-07 59.3 283 23.3
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 1.6e-06 58.5 266 24.8
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 1.6e-06 58.5 275 22.9
Atru.chr5.109 Acer truncatum HOM05D006213 ORTHO05D000044 2.1e-06 58.2 121 36.4
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 2.1e-06 58.2 318 22.6
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 2.1e-06 58.2 266 23.7
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 2.1e-06 58.2 321 26.2
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 2.7e-06 57.8 274 24.5
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 2.7e-06 57.8 275 24.0
DCAR_029493 Daucus carota HOM05D006213 ORTHO05D008107 3.6e-06 57.4 29 79.3
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 3.6e-06 57.4 254 23.2
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 6.1e-06 56.6 202 26.7
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 6.1e-06 56.6 165 28.5
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 8.0e-06 56.2 278 22.7


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